RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 LINC00477Q96M19 166 aa17.07■□□□□ 0.32
PNKP-201ENST00000322344 OVOL1O14753 267 aa17.06■□□□□ 0.32
PNKP-201ENST00000322344 UNQ9165/PRO28630Q6UXU0 137 aa17.06■□□□□ 0.32
PNKP-201ENST00000322344 ZNF738Q8NE65 137 aa17.06■□□□□ 0.32
PNKP-201ENST00000322344 ORAOV1Q8WV07 137 aa17.06■□□□□ 0.32
PNKP-201ENST00000322344 DSCR9P59020 149 aa17.06■□□□□ 0.32
PNKP-201ENST00000322344 CACNG7P62955 275 aa17.06■□□□□ 0.32
PNKP-201ENST00000322344 IGHV4-4A0A075B6R2 117 aa17.05■□□□□ 0.32
PNKP-201ENST00000322344 SMAD7O15105 426 aaKnown RBP17.05■□□□□ 0.32
PNKP-201ENST00000322344 TNFRSF6BO95407 300 aa17.05■□□□□ 0.32
PNKP-201ENST00000322344 TRBV12-3P01733 135 aa17.05■□□□□ 0.32
PNKP-201ENST00000322344 COX8AP10176 69 aa17.05■□□□□ 0.32
PNKP-201ENST00000322344 IFI27L1Q96BM0 104 aa17.05■□□□□ 0.32
PNKP-201ENST00000322344 A0A0G2JLM5 398 aa17.04■□□□□ 0.32
PNKP-201ENST00000322344 IGHV7-4-1A0A0J9YVY3 117 aa17.04■□□□□ 0.32
PNKP-201ENST00000322344 B4DSR2 109 aa17.04■□□□□ 0.32
PNKP-201ENST00000322344 SPOCK3Q9BQ16 436 aa17.04■□□□□ 0.32
PNKP-201ENST00000322344 SNAI2O43623 268 aa17.04■□□□□ 0.32
PNKP-201ENST00000322344 C12orf54Q6X4T0 127 aa17.04■□□□□ 0.32
PNKP-201ENST00000322344 OR1N2Q8NGR9 330 aa17.04■□□□□ 0.32
PNKP-201ENST00000322344 C20orf173Q96LM9 149 aa17.04■□□□□ 0.32
PNKP-201ENST00000322344 ABCA2Q9BZC7 2435 aa17.04■□□□□ 0.32
PNKP-201ENST00000322344 NCOR2Q9Y618 2525 aa17.03■□□□□ 0.32
PNKP-201ENST00000322344 SOCS3O14543 225 aa17.03■□□□□ 0.32
PNKP-201ENST00000322344 NPSP0C0P6 89 aa17.03■□□□□ 0.32
PNKP-201ENST00000322344 PF4V1P10720 104 aa17.03■□□□□ 0.32
PNKP-201ENST00000322344 GATA3P23771 443 aa17.03■□□□□ 0.32
PNKP-201ENST00000322344 GPHB5Q86YW7 130 aa17.03■□□□□ 0.32
PNKP-201ENST00000322344 OR10J6PQ8NGY7 276 aa17.03■□□□□ 0.32
PNKP-201ENST00000322344 IGLV1-40P01703 118 aa17.03■□□□□ 0.32
PNKP-201ENST00000322344 FOXE3Q13461 319 aa17.03■□□□□ 0.32
PNKP-201ENST00000322344 OR4X2Q8NGF9 303 aa17.03■□□□□ 0.32
PNKP-201ENST00000322344 ZNF580Q9UK33 172 aa17.03■□□□□ 0.32
PNKP-201ENST00000322344 CHD8Q9HCK8 2581 aa17.03■□□□□ 0.32
PNKP-201ENST00000322344 ITPR1Q14643 2758 aa17.02■□□□□ 0.32
PNKP-201ENST00000322344 FCER1GP30273 86 aa17.01■□□□□ 0.31
PNKP-201ENST00000322344 BLCAPP62952 87 aa17.01■□□□□ 0.31
PNKP-201ENST00000322344 MPV17L2Q567V2 206 aa17.01■□□□□ 0.31
PNKP-201ENST00000322344 COX11Q9Y6N1 276 aa17.01■□□□□ 0.31
PNKP-201ENST00000322344 IGHV3-11P01762 117 aa17.01■□□□□ 0.31
PNKP-201ENST00000322344 KLK15Q9H2R5 256 aa17.01■□□□□ 0.31
PNKP-201ENST00000322344 TP73-AS1Q9UF72 201 aa17.01■□□□□ 0.31
PNKP-201ENST00000322344 PRSS47A8MTI9 375 aa17■□□□□ 0.31
PNKP-201ENST00000322344 NUDT3O95989 172 aa17■□□□□ 0.31
PNKP-201ENST00000322344 FXYD7P58549 80 aa17■□□□□ 0.31
PNKP-201ENST00000322344 Q8N8P6 123 aa17■□□□□ 0.31
PNKP-201ENST00000322344 SPANXN1Q5VSR9 72 aa16.99■□□□□ 0.31
PNKP-201ENST00000322344 DEFB125Q8N687 156 aa16.99■□□□□ 0.31
PNKP-201ENST00000322344 OR2K2Q8NGT1 345 aa16.99■□□□□ 0.31
PNKP-201ENST00000322344 TRAV21A0A0B4J279 112 aa16.99■□□□□ 0.31
PNKP-201ENST00000322344 GAS8-AS1O95177 125 aa16.99■□□□□ 0.31
PNKP-201ENST00000322344 EVI2AP22794 236 aa16.99■□□□□ 0.31
PNKP-201ENST00000322344 CFHR3Q02985 330 aa16.99■□□□□ 0.31
PNKP-201ENST00000322344 BVES-AS1Q5T3Y7 98 aa16.99■□□□□ 0.31
PNKP-201ENST00000322344 LEPP41159 167 aa16.98■□□□□ 0.31
PNKP-201ENST00000322344 PRR9Q5T870 116 aa16.98■□□□□ 0.31
PNKP-201ENST00000322344 ZFAND2AQ8N6M9 145 aa16.98■□□□□ 0.31
PNKP-201ENST00000322344 TRBV7-9A0A0J9YWB2 115 aa16.97■□□□□ 0.31
PNKP-201ENST00000322344 SLC25A16P16260 332 aa16.97■□□□□ 0.31
PNKP-201ENST00000322344 PSMG4Q5JS54 123 aa16.97■□□□□ 0.31
PNKP-201ENST00000322344 CSMD1Q96PZ7 3565 aa16.97■□□□□ 0.31
PNKP-201ENST00000322344 ANKRD39Q53RE8 183 aa16.96■□□□□ 0.31
PNKP-201ENST00000322344 RHPN1-AS1Q9BWJ2 59 aa16.96■□□□□ 0.31
PNKP-201ENST00000322344 DAZ1Q9NQZ3 744 aaKnown RBP16.96■□□□□ 0.31
PNKP-201ENST00000322344 AKAP6Q13023 2319 aa16.96■□□□□ 0.31
PNKP-201ENST00000322344 IGLV2-18A0A075B6J9 118 aa16.96■□□□□ 0.3
PNKP-201ENST00000322344 H3BVH4 76 aa16.96■□□□□ 0.3
PNKP-201ENST00000322344 GATA1P15976 413 aaPredicted RBP16.96■□□□□ 0.3
PNKP-201ENST00000322344 Q6ZS46 218 aa16.96■□□□□ 0.3
PNKP-201ENST00000322344 MRAP2Q96G30 205 aa16.96■□□□□ 0.3
PNKP-201ENST00000322344 FAM19A4Q96LR4 140 aa16.96■□□□□ 0.3
PNKP-201ENST00000322344 UFC1Q9Y3C8 167 aa16.96■□□□□ 0.3
PNKP-201ENST00000322344 K7EMT4 169 aa16.95■□□□□ 0.3
PNKP-201ENST00000322344 AVPP01185 164 aa16.95■□□□□ 0.3
PNKP-201ENST00000322344 RPL11P62913 178 aaKnown RBP16.95■□□□□ 0.3
PNKP-201ENST00000322344 MED14OSP0DP75 135 aa16.94■□□□□ 0.3
PNKP-201ENST00000322344 SAMD13Q5VXD3 122 aa16.94■□□□□ 0.3
PNKP-201ENST00000322344 Q6ZQT7 251 aa16.94■□□□□ 0.3
PNKP-201ENST00000322344 C2orf91Q6ZV80 131 aa16.94■□□□□ 0.3
PNKP-201ENST00000322344 APRG1Q8IVJ8 170 aa16.94■□□□□ 0.3
PNKP-201ENST00000322344 NRACQ8N912 160 aa16.94■□□□□ 0.3
PNKP-201ENST00000322344 FGF6P10767 208 aa16.94■□□□□ 0.3
PNKP-201ENST00000322344 PEF1Q9UBV8 284 aaKnown RBP16.94■□□□□ 0.3
PNKP-201ENST00000322344 SMPXQ9UHP9 88 aa16.94■□□□□ 0.3
PNKP-201ENST00000322344 ASIPP42127 132 aa16.92■□□□□ 0.3
PNKP-201ENST00000322344 LINC01356Q8N9X3 169 aa16.92■□□□□ 0.3
PNKP-201ENST00000322344 C18orf15Q96N68 181 aa16.92■□□□□ 0.3
PNKP-201ENST00000322344 CACNA1BQ00975 2339 aa16.92■□□□□ 0.3
PNKP-201ENST00000322344 TM4SF20Q53R12 229 aa16.92■□□□□ 0.3
PNKP-201ENST00000322344 BOD1L2Q8IYS8 172 aa16.92■□□□□ 0.3
PNKP-201ENST00000322344 TMEM158Q8WZ71 300 aa16.92■□□□□ 0.3
PNKP-201ENST00000322344 TMEM89A2RUT3 159 aa16.91■□□□□ 0.3
PNKP-201ENST00000322344 ATP5LO75964 103 aa16.91■□□□□ 0.3
PNKP-201ENST00000322344 LCNL1Q6ZST4 164 aa16.91■□□□□ 0.3
PNKP-201ENST00000322344 OR9G4Q8NGQ1 327 aa16.91■□□□□ 0.3
PNKP-201ENST00000322344 J3QLI3 93 aa16.91■□□□□ 0.3
PNKP-201ENST00000322344 LAGE3Q14657 143 aa16.91■□□□□ 0.3
PNKP-201ENST00000322344 WFDC3Q8IUB2 231 aa16.91■□□□□ 0.3
PNKP-201ENST00000322344 ASH1LQ9NR48 2969 aaKnown RBP16.91■□□□□ 0.3
PNKP-201ENST00000322344 J3KRW8 73 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms