RNA–Protein interactions for RNA: ENST00000322282.11

GRAMD1B-201, Transcript of GRAM domain containing 1B, humanhuman

TSL 5 BASIC

Gene GRAMD1B, Length 2,571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1B-201ENST00000322282 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.34□□□□□ -0.91
GRAMD1B-201ENST00000322282 LINC00477Q96M19 166 aa9.34□□□□□ -0.91
GRAMD1B-201ENST00000322282 SIGLEC8Q9NYZ4 499 aa9.34□□□□□ -0.91
GRAMD1B-201ENST00000322282 TENM4Q6N022 2769 aa9.34□□□□□ -0.91
GRAMD1B-201ENST00000322282 OR4C46A6NHA9 309 aa9.34□□□□□ -0.91
GRAMD1B-201ENST00000322282 OVOL1O14753 267 aa9.34□□□□□ -0.91
GRAMD1B-201ENST00000322282 PPBPP02775 128 aa9.34□□□□□ -0.91
GRAMD1B-201ENST00000322282 IFI27P40305 119 aaPredicted RBP9.34□□□□□ -0.91
GRAMD1B-201ENST00000322282 NUTF2P61970 127 aaKnown RBP9.34□□□□□ -0.91
GRAMD1B-201ENST00000322282 LOXL1Q08397 574 aaPredicted RBP9.34□□□□□ -0.91
GRAMD1B-201ENST00000322282 DEFB112Q30KQ8 113 aa9.34□□□□□ -0.91
GRAMD1B-201ENST00000322282 ZNF738Q8NE65 137 aa9.34□□□□□ -0.91
GRAMD1B-201ENST00000322282 C20orf173Q96LM9 149 aa9.34□□□□□ -0.91
GRAMD1B-201ENST00000322282 SVEP1Q4LDE5 3571 aa9.34□□□□□ -0.91
GRAMD1B-201ENST00000322282 CRYBG3Q68DQ2 2970 aa9.33□□□□□ -0.92
GRAMD1B-201ENST00000322282 MUC21A0A0G2JKD1 596 aa9.33□□□□□ -0.92
GRAMD1B-201ENST00000322282 MUC21A0A140T8X8 626 aa9.33□□□□□ -0.92
GRAMD1B-201ENST00000322282 TMEM89A2RUT3 159 aa9.33□□□□□ -0.92
GRAMD1B-201ENST00000322282 CKS2P33552 79 aa9.33□□□□□ -0.92
GRAMD1B-201ENST00000322282 MUC21Q5SSG8 566 aa9.33□□□□□ -0.92
GRAMD1B-201ENST00000322282 LAMTOR2Q9Y2Q5 125 aa9.33□□□□□ -0.92
GRAMD1B-201ENST00000322282 IGHV7-4-1A0A0J9YVY3 117 aa9.33□□□□□ -0.92
GRAMD1B-201ENST00000322282 K7EMT4 169 aa9.33□□□□□ -0.92
GRAMD1B-201ENST00000322282 SRSF1Q07955 248 aaKnown RBP eCLIP9.33□□□□□ -0.92
GRAMD1B-201ENST00000322282 RNF185Q96GF1 192 aa9.33□□□□□ -0.92
GRAMD1B-201ENST00000322282 C11orf21Q9P2W6 132 aa9.33□□□□□ -0.92
GRAMD1B-201ENST00000322282 PLA2G2AP14555 144 aa9.32□□□□□ -0.92
GRAMD1B-201ENST00000322282 MAJINQ3KP22 176 aa9.32□□□□□ -0.92
GRAMD1B-201ENST00000322282 DAZ1Q9NQZ3 744 aaKnown RBP9.32□□□□□ -0.92
GRAMD1B-201ENST00000322282 PEF1Q9UBV8 284 aaKnown RBP9.32□□□□□ -0.92
GRAMD1B-201ENST00000322282 VPS13CQ709C8 3753 aa9.32□□□□□ -0.92
GRAMD1B-201ENST00000322282 UBR5O95071 2799 aaPredicted RBP9.32□□□□□ -0.92
GRAMD1B-201ENST00000322282 GCN1Q92616 2671 aaKnown RBP9.32□□□□□ -0.92
GRAMD1B-201ENST00000322282 IGHV4-59P01825 116 aa9.32□□□□□ -0.92
GRAMD1B-201ENST00000322282 IGLL1P15814 213 aa9.32□□□□□ -0.92
GRAMD1B-201ENST00000322282 PSMB8P28062 276 aa9.32□□□□□ -0.92
GRAMD1B-201ENST00000322282 OR10J6PQ8NGY7 276 aa9.32□□□□□ -0.92
GRAMD1B-201ENST00000322282 ZNF747Q9BV97 191 aa9.32□□□□□ -0.92
GRAMD1B-201ENST00000322282 MSRB1Q9NZV6 116 aa9.32□□□□□ -0.92
GRAMD1B-201ENST00000322282 ZFHX3Q15911 3703 aa9.32□□□□□ -0.92
GRAMD1B-201ENST00000322282 SNAI2O43623 268 aa9.31□□□□□ -0.92
GRAMD1B-201ENST00000322282 TGFAP01135 160 aa9.31□□□□□ -0.92
GRAMD1B-201ENST00000322282 LINC01545Q5VT33 79 aa9.31□□□□□ -0.92
GRAMD1B-201ENST00000322282 Q6ZN92 141 aa9.31□□□□□ -0.92
GRAMD1B-201ENST00000322282 RHPN1-AS1Q9BWJ2 59 aa9.31□□□□□ -0.92
GRAMD1B-201ENST00000322282 ST20Q9HBF5 79 aa9.31□□□□□ -0.92
GRAMD1B-201ENST00000322282 CENPEQ02224 2701 aa9.31□□□□□ -0.92
GRAMD1B-201ENST00000322282 DOPEY2Q9Y3R5 2298 aa9.31□□□□□ -0.92
GRAMD1B-201ENST00000322282 IGHV4-4A0A075B6R2 117 aa9.31□□□□□ -0.92
GRAMD1B-201ENST00000322282 LOC389332A0A1B0GUA5 103 aa9.31□□□□□ -0.92
GRAMD1B-201ENST00000322282 TCF21O43680 179 aa9.31□□□□□ -0.92
GRAMD1B-201ENST00000322282 NPYP01303 97 aa9.31□□□□□ -0.92
GRAMD1B-201ENST00000322282 HNRNPA3P51991 378 aaKnown RBP9.31□□□□□ -0.92
GRAMD1B-201ENST00000322282 FAM106AQ4KMX7 169 aa9.31□□□□□ -0.92
GRAMD1B-201ENST00000322282 LCNL1Q6ZST4 164 aa9.31□□□□□ -0.92
GRAMD1B-201ENST00000322282 A0A096LNJ9 63 aa9.3□□□□□ -0.92
GRAMD1B-201ENST00000322282 TRBV7-9A0A0J9YWB2 115 aa9.3□□□□□ -0.92
GRAMD1B-201ENST00000322282 LINC01546A6NGU7 62 aa9.3□□□□□ -0.92
GRAMD1B-201ENST00000322282 J3QKU1 62 aa9.3□□□□□ -0.92
GRAMD1B-201ENST00000322282 FSHBP01225 129 aa9.3□□□□□ -0.92
GRAMD1B-201ENST00000322282 CACNG7P62955 275 aa9.3□□□□□ -0.92
GRAMD1B-201ENST00000322282 FOXE3Q13461 319 aa9.3□□□□□ -0.92
GRAMD1B-201ENST00000322282 SMPXQ9UHP9 88 aa9.3□□□□□ -0.92
GRAMD1B-201ENST00000322282 SAMD13Q5VXD3 122 aa9.3□□□□□ -0.92
GRAMD1B-201ENST00000322282 FAM19A4Q96LR4 140 aa9.3□□□□□ -0.92
GRAMD1B-201ENST00000322282 MAP1LC3AQ9H492 121 aa9.3□□□□□ -0.92
GRAMD1B-201ENST00000322282 BEX4Q9NWD9 120 aaPredicted RBP9.3□□□□□ -0.92
GRAMD1B-201ENST00000322282 MRPS16Q9Y3D3 137 aaKnown RBP9.3□□□□□ -0.92
GRAMD1B-201ENST00000322282 SMKR1H3BMG3 65 aa9.29□□□□□ -0.92
GRAMD1B-201ENST00000322282 RPLP1P05386 114 aaKnown RBP9.29□□□□□ -0.92
GRAMD1B-201ENST00000322282 TM4SF20Q53R12 229 aa9.29□□□□□ -0.92
GRAMD1B-201ENST00000322282 PRSS57Q6UWY2 283 aa9.29□□□□□ -0.92
GRAMD1B-201ENST00000322282 LRRC75A-AS1Q8N1F1 130 aa9.29□□□□□ -0.92
GRAMD1B-201ENST00000322282 ZFAND2AQ8N6M9 145 aa9.29□□□□□ -0.92
GRAMD1B-201ENST00000322282 TRAV21A0A0B4J279 112 aa9.29□□□□□ -0.92
GRAMD1B-201ENST00000322282 HBDP02042 147 aa9.29□□□□□ -0.92
GRAMD1B-201ENST00000322282 TSPOP30536 169 aa9.29□□□□□ -0.92
GRAMD1B-201ENST00000322282 TMEM95Q3KNT9 176 aa9.29□□□□□ -0.92
GRAMD1B-201ENST00000322282 ANKRD39Q53RE8 183 aa9.29□□□□□ -0.92
GRAMD1B-201ENST00000322282 PRR9Q5T870 116 aa9.29□□□□□ -0.92
GRAMD1B-201ENST00000322282 SMIM15Q7Z3B0 74 aa9.29□□□□□ -0.92
GRAMD1B-201ENST00000322282 APRG1Q8IVJ8 170 aa9.29□□□□□ -0.92
GRAMD1B-201ENST00000322282 CR1P17927 2039 aa9.28□□□□□ -0.92
GRAMD1B-201ENST00000322282 HSBP1L1C9JCN9 74 aa9.28□□□□□ -0.92
GRAMD1B-201ENST00000322282 NCR2O95944 276 aa9.28□□□□□ -0.92
GRAMD1B-201ENST00000322282 IGHV4-31P0DP07 118 aa9.28□□□□□ -0.92
GRAMD1B-201ENST00000322282 RPL11P62913 178 aaKnown RBP9.28□□□□□ -0.92
GRAMD1B-201ENST00000322282 MS4A6AQ9H2W1 248 aa9.28□□□□□ -0.92
GRAMD1B-201ENST00000322282 VPREB3Q9UKI3 123 aa9.28□□□□□ -0.92
GRAMD1B-201ENST00000322282 UFC1Q9Y3C8 167 aa9.28□□□□□ -0.92
GRAMD1B-201ENST00000322282 RNF223E7ERA6 249 aa9.28□□□□□ -0.92
GRAMD1B-201ENST00000322282 Q6YL49 198 aa9.28□□□□□ -0.92
GRAMD1B-201ENST00000322282 OR8A1Q8NGG7 326 aa9.28□□□□□ -0.92
GRAMD1B-201ENST00000322282 NXT2Q9NPJ8 142 aaKnown RBP9.28□□□□□ -0.92
GRAMD1B-201ENST00000322282 USP9YO00507 2555 aaPredicted RBP9.27□□□□□ -0.92
GRAMD1B-201ENST00000322282 TIMM8BQ9Y5J9 83 aaPredicted RBP9.27□□□□□ -0.92
GRAMD1B-201ENST00000322282 SPG11Q96JI7 2443 aa9.27□□□□□ -0.93
GRAMD1B-201ENST00000322282 CELSR1Q9NYQ6 3014 aa9.27□□□□□ -0.93
GRAMD1B-201ENST00000322282 TNFRSF6BO95407 300 aa9.27□□□□□ -0.93
GRAMD1B-201ENST00000322282 DEFB113Q30KQ7 82 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms