RNA–Protein interactions for RNA: ENST00000319172.9

TMEM39A-201, Transcript of transmembrane protein 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39A, Length 4,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-201ENST00000319172 PMCHL1Q16048 86 aa7.24□□□□□ -1.25
TMEM39A-201ENST00000319172 RNF151Q2KHN1 245 aa7.24□□□□□ -1.25
TMEM39A-201ENST00000319172 C1orf194Q5T5A4 169 aa7.24□□□□□ -1.25
TMEM39A-201ENST00000319172 AJUBAQ96IF1 538 aa7.24□□□□□ -1.25
TMEM39A-201ENST00000319172 UBE2E2Q96LR5 201 aa7.24□□□□□ -1.25
TMEM39A-201ENST00000319172 HIST1H2BLQ99880 126 aa7.24□□□□□ -1.25
TMEM39A-201ENST00000319172 MRPL27Q9P0M9 148 aaKnown RBP7.24□□□□□ -1.25
TMEM39A-201ENST00000319172 ZNF256Q9Y2P7 627 aaPredicted RBP7.24□□□□□ -1.25
TMEM39A-201ENST00000319172 PRSS2P07478 247 aa7.24□□□□□ -1.25
TMEM39A-201ENST00000319172 PRR25Q96S07 402 aa7.24□□□□□ -1.25
TMEM39A-201ENST00000319172 H7C1H1 209 aa7.23□□□□□ -1.25
TMEM39A-201ENST00000319172 TRBV12-3P01733 135 aa7.23□□□□□ -1.25
TMEM39A-201ENST00000319172 LOXL1Q08397 574 aaPredicted RBP7.23□□□□□ -1.25
TMEM39A-201ENST00000319172 HIST3H2BBQ8N257 126 aa7.23□□□□□ -1.25
TMEM39A-201ENST00000319172 TMEM75Q8N9X5 138 aa7.23□□□□□ -1.25
TMEM39A-201ENST00000319172 ZC2HC1AQ96GY0 325 aa7.23□□□□□ -1.25
TMEM39A-201ENST00000319172 LINC00477Q96M19 166 aa7.23□□□□□ -1.25
TMEM39A-201ENST00000319172 TRGV4A0A0C4DH28 118 aa7.23□□□□□ -1.25
TMEM39A-201ENST00000319172 A0A1B0GV90 55 aa7.23□□□□□ -1.25
TMEM39A-201ENST00000319172 OR11H12B2RN74 326 aa7.23□□□□□ -1.25
TMEM39A-201ENST00000319172 ELANEP08246 267 aa7.23□□□□□ -1.25
TMEM39A-201ENST00000319172 ZNF503Q96F45 646 aa7.23□□□□□ -1.25
TMEM39A-201ENST00000319172 MYO15AQ9UKN7 3530 aa7.23□□□□□ -1.25
TMEM39A-201ENST00000319172 A0A1B0GW15 77 aa7.23□□□□□ -1.25
TMEM39A-201ENST00000319172 UBE2CO00762 179 aa7.23□□□□□ -1.25
TMEM39A-201ENST00000319172 TCF21O43680 179 aa7.23□□□□□ -1.25
TMEM39A-201ENST00000319172 IGHG2P01859 326 aa7.23□□□□□ -1.25
TMEM39A-201ENST00000319172 NMUP48645 174 aa7.23□□□□□ -1.25
TMEM39A-201ENST00000319172 PMCHL2Q9BQD1 86 aa7.23□□□□□ -1.25
TMEM39A-201ENST00000319172 GEMIN7Q9H840 131 aaKnown RBP7.23□□□□□ -1.25
TMEM39A-201ENST00000319172 LINC01619G3V211 115 aa7.22□□□□□ -1.25
TMEM39A-201ENST00000319172 ATP5L2Q7Z4Y8 100 aa7.22□□□□□ -1.25
TMEM39A-201ENST00000319172 IGHV7-4-1A0A0J9YVY3 117 aa7.22□□□□□ -1.25
TMEM39A-201ENST00000319172 A6NDX4 124 aa7.22□□□□□ -1.25
TMEM39A-201ENST00000319172 AMBPP02760 352 aa7.22□□□□□ -1.25
TMEM39A-201ENST00000319172 HOXD3P31249 432 aaPredicted RBP7.22□□□□□ -1.25
TMEM39A-201ENST00000319172 LEPP41159 167 aa7.22□□□□□ -1.25
TMEM39A-201ENST00000319172 VPS25Q9BRG1 176 aa7.22□□□□□ -1.25
TMEM39A-201ENST00000319172 BOD1L1Q8NFC6 3051 aa7.22□□□□□ -1.25
TMEM39A-201ENST00000319172 RAI1Q7Z5J4 1906 aaPredicted RBP7.22□□□□□ -1.25
TMEM39A-201ENST00000319172 TMEM213A2RRL7 107 aa7.22□□□□□ -1.25
TMEM39A-201ENST00000319172 IGHV4-31P0DP07 118 aa7.22□□□□□ -1.25
TMEM39A-201ENST00000319172 PLP1P60201 277 aa7.22□□□□□ -1.25
TMEM39A-201ENST00000319172 SUMO2P61956 95 aaKnown RBP7.22□□□□□ -1.25
TMEM39A-201ENST00000319172 SPINK13Q1W4C9 94 aa7.22□□□□□ -1.25
TMEM39A-201ENST00000319172 AMN1Q8IY45 258 aa7.22□□□□□ -1.25
TMEM39A-201ENST00000319172 D6R8Y8 96 aa7.22□□□□□ -1.25
TMEM39A-201ENST00000319172 SMKR1H3BMG3 65 aa7.22□□□□□ -1.25
TMEM39A-201ENST00000319172 BUB3O43684 328 aa7.21□□□□□ -1.25
TMEM39A-201ENST00000319172 NIT1Q86X76 327 aa7.21□□□□□ -1.25
TMEM39A-201ENST00000319172 MAP1AP78559 2803 aaPredicted RBP7.21□□□□□ -1.25
TMEM39A-201ENST00000319172 F2Z2F3 143 aa7.21□□□□□ -1.26
TMEM39A-201ENST00000319172 H3BUA1 57 aa7.21□□□□□ -1.26
TMEM39A-201ENST00000319172 AVPP01185 164 aa7.21□□□□□ -1.26
TMEM39A-201ENST00000319172 SPATA45Q537H7 98 aa7.21□□□□□ -1.26
TMEM39A-201ENST00000319172 SMPXQ9UHP9 88 aa7.21□□□□□ -1.26
TMEM39A-201ENST00000319172 UNQ9165/PRO28630Q6UXU0 137 aa7.21□□□□□ -1.26
TMEM39A-201ENST00000319172 TRAV12-2A0A075B6T6 113 aa7.2□□□□□ -1.26
TMEM39A-201ENST00000319172 IFITM10A6NMD0 228 aa7.2□□□□□ -1.26
TMEM39A-201ENST00000319172 TMEM238C9JI98 176 aa7.2□□□□□ -1.26
TMEM39A-201ENST00000319172 PPBPP02775 128 aa7.2□□□□□ -1.26
TMEM39A-201ENST00000319172 PSMB2P49721 201 aa7.2□□□□□ -1.26
TMEM39A-201ENST00000319172 SLURP1P55000 103 aa7.2□□□□□ -1.26
TMEM39A-201ENST00000319172 DEFB1P60022 68 aa7.2□□□□□ -1.26
TMEM39A-201ENST00000319172 TMEM70Q9BUB7 260 aa7.2□□□□□ -1.26
TMEM39A-201ENST00000319172 AGPAT4-IT1Q9H0P7 198 aa7.2□□□□□ -1.26
TMEM39A-201ENST00000319172 EBI3Q14213 229 aa7.2□□□□□ -1.26
TMEM39A-201ENST00000319172 C14orf178Q8N769 122 aaPredicted RBP7.2□□□□□ -1.26
TMEM39A-201ENST00000319172 MEGF9Q9H1U4 602 aa7.2□□□□□ -1.26
TMEM39A-201ENST00000319172 ZNF492Q9P255 531 aa7.2□□□□□ -1.26
TMEM39A-201ENST00000319172 CCDC140Q96MF4 163 aa7.2□□□□□ -1.26
TMEM39A-201ENST00000319172 WI2-2373I1.2A0A1W2PRP0 233 aa7.2□□□□□ -1.26
TMEM39A-201ENST00000319172 TMEM190Q8WZ59 177 aa7.2□□□□□ -1.26
TMEM39A-201ENST00000319172 IGHV3-73A0A0B4J1V6 119 aa7.19□□□□□ -1.26
TMEM39A-201ENST00000319172 DLEU1O43261 78 aa7.19□□□□□ -1.26
TMEM39A-201ENST00000319172 LGALS1P09382 135 aaKnown RBP7.19□□□□□ -1.26
TMEM39A-201ENST00000319172 FAM231DQ6ZW35 169 aa7.19□□□□□ -1.26
TMEM39A-201ENST00000319172 ZNF479Q96JC4 524 aa7.19□□□□□ -1.26
TMEM39A-201ENST00000319172 TOMM7Q9P0U1 55 aa7.19□□□□□ -1.26
TMEM39A-201ENST00000319172 C7orf71A4D174 169 aa7.19□□□□□ -1.26
TMEM39A-201ENST00000319172 KNCNA6PVL3 124 aa7.19□□□□□ -1.26
TMEM39A-201ENST00000319172 PRAC2D3DTV9 90 aa7.19□□□□□ -1.26
TMEM39A-201ENST00000319172 LTAP01374 205 aa7.19□□□□□ -1.26
TMEM39A-201ENST00000319172 RPL13AP40429 203 aaKnown RBP7.19□□□□□ -1.26
TMEM39A-201ENST00000319172 SLAQ13239 276 aa7.19□□□□□ -1.26
TMEM39A-201ENST00000319172 PAPPA-AS1Q5QFB9 102 aa7.19□□□□□ -1.26
TMEM39A-201ENST00000319172 SPRY2O43597 315 aa7.19□□□□□ -1.26
TMEM39A-201ENST00000319172 IGHV3-53P01767 116 aa7.19□□□□□ -1.26
TMEM39A-201ENST00000319172 CMC4P56277 68 aaPredicted RBP7.19□□□□□ -1.26
TMEM39A-201ENST00000319172 C10orf99Q6UWK7 81 aa7.19□□□□□ -1.26
TMEM39A-201ENST00000319172 PRDM13Q9H4Q3 707 aa7.19□□□□□ -1.26
TMEM39A-201ENST00000319172 KLK9Q9UKQ9 250 aa7.19□□□□□ -1.26
TMEM39A-201ENST00000319172 TRGV1A0A0A0MS02 117 aa7.18□□□□□ -1.26
TMEM39A-201ENST00000319172 DEFB130BP0DP73 79 aa7.18□□□□□ -1.26
TMEM39A-201ENST00000319172 DEFB130AP0DP74 79 aa7.18□□□□□ -1.26
TMEM39A-201ENST00000319172 ZNF415Q09FC8 603 aa7.18□□□□□ -1.26
TMEM39A-201ENST00000319172 TMEM101Q96IK0 257 aa7.18□□□□□ -1.26
TMEM39A-201ENST00000319172 XCL2Q9UBD3 114 aa7.18□□□□□ -1.26
TMEM39A-201ENST00000319172 IGHV4OR15-8A0A075B7B6 117 aa7.18□□□□□ -1.26
TMEM39A-201ENST00000319172 A0A087WW49 117 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms