RNA–Protein interactions for RNA: ENST00000318787.13

HDDC2-201, Transcript of HD domain containing 2, humanhuman

TSL 1 (best)

Gene HDDC2, Length 1,350 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-201ENST00000318787 PSMG3Q9BT73 122 aaPredicted RBP11.31□□□□□ -0.6
HDDC2-201ENST00000318787 TRGV2A0A075B6R0 118 aa11.3□□□□□ -0.6
HDDC2-201ENST00000318787 TRGV1A0A0A0MS02 117 aa11.3□□□□□ -0.6
HDDC2-201ENST00000318787 A0A0J9YY99 117 aa11.3□□□□□ -0.6
HDDC2-201ENST00000318787 RBAKDNA6NC62 111 aa11.3□□□□□ -0.6
HDDC2-201ENST00000318787 GNG5P63218 68 aa11.3□□□□□ -0.6
HDDC2-201ENST00000318787 Q6ZTI0 123 aa11.3□□□□□ -0.6
HDDC2-201ENST00000318787 GOLT1AQ6ZVE7 132 aa11.3□□□□□ -0.6
HDDC2-201ENST00000318787 OR2G3Q8NGZ4 309 aa11.3□□□□□ -0.6
HDDC2-201ENST00000318787 RAB24Q969Q5 203 aa11.3□□□□□ -0.6
HDDC2-201ENST00000318787 TP53TG3Q9ULZ0 132 aa11.3□□□□□ -0.6
HDDC2-201ENST00000318787 TNFSF18Q9UNG2 199 aa11.3□□□□□ -0.6
HDDC2-201ENST00000318787 IGHV1OR15-1A0A075B7D0 117 aa11.29□□□□□ -0.6
HDDC2-201ENST00000318787 SMLR1H3BR10 107 aa11.29□□□□□ -0.6
HDDC2-201ENST00000318787 ARPC5O15511 151 aa11.29□□□□□ -0.6
HDDC2-201ENST00000318787 MBP02144 154 aa11.29□□□□□ -0.6
HDDC2-201ENST00000318787 TMPRSS5Q9H3S3 457 aa11.29□□□□□ -0.6
HDDC2-201ENST00000318787 NAGKQ9UJ70 344 aa11.29□□□□□ -0.6
HDDC2-201ENST00000318787 KLF12Q9Y4X4 402 aa11.29□□□□□ -0.6
HDDC2-201ENST00000318787 DNAH6Q9C0G6 4158 aa11.29□□□□□ -0.6
HDDC2-201ENST00000318787 NMBP08949 121 aa11.28□□□□□ -0.6
HDDC2-201ENST00000318787 SERF2P84101 59 aa11.28□□□□□ -0.6
HDDC2-201ENST00000318787 GNPNAT1Q96EK6 184 aaPredicted RBP11.28□□□□□ -0.6
HDDC2-201ENST00000318787 SGK494Q96LW2 274 aa11.28□□□□□ -0.6
HDDC2-201ENST00000318787 ACTR3CQ9C0K3 210 aaPredicted RBP11.28□□□□□ -0.6
HDDC2-201ENST00000318787 TRAV26-1A0A087WT03 109 aa11.28□□□□□ -0.6
HDDC2-201ENST00000318787 TRAV8-1A0A0A6YYK1 113 aa11.28□□□□□ -0.6
HDDC2-201ENST00000318787 F6UZH7 168 aa11.28□□□□□ -0.6
HDDC2-201ENST00000318787 STAG3L2P0CL84 134 aa11.28□□□□□ -0.6
HDDC2-201ENST00000318787 STAG3L3P0CL85 134 aa11.28□□□□□ -0.6
HDDC2-201ENST00000318787 GCHFRP30047 84 aa11.28□□□□□ -0.6
HDDC2-201ENST00000318787 DAZ2Q13117 558 aaKnown RBP11.28□□□□□ -0.6
HDDC2-201ENST00000318787 C11orf72Q8NBR9 251 aa11.28□□□□□ -0.6
HDDC2-201ENST00000318787 MRPL16Q9NX20 251 aaKnown RBP11.28□□□□□ -0.6
HDDC2-201ENST00000318787 ZNF415Q09FC8 603 aa11.27□□□□□ -0.61
HDDC2-201ENST00000318787 ANXA2RQ3ZCQ2 193 aa11.27□□□□□ -0.61
HDDC2-201ENST00000318787 CXorf1O96002 111 aa11.26□□□□□ -0.61
HDDC2-201ENST00000318787 IGHV3-53P01767 116 aa11.26□□□□□ -0.61
HDDC2-201ENST00000318787 HOXA5P20719 270 aa11.26□□□□□ -0.61
HDDC2-201ENST00000318787 TCL1AP56279 114 aa11.26□□□□□ -0.61
HDDC2-201ENST00000318787 RNF212Q495C1 297 aa11.26□□□□□ -0.61
HDDC2-201ENST00000318787 FAM159AQ6UWV7 190 aa11.26□□□□□ -0.61
HDDC2-201ENST00000318787 SSX7Q7RTT5 188 aa11.26□□□□□ -0.61
HDDC2-201ENST00000318787 LINC00612Q8N6U2 182 aa11.26□□□□□ -0.61
HDDC2-201ENST00000318787 LINC00467Q9BRT7 94 aa11.26□□□□□ -0.61
HDDC2-201ENST00000318787 TRBV7-9A0A0J9YWB2 115 aa11.25□□□□□ -0.61
HDDC2-201ENST00000318787 G3V3Q6 166 aa11.25□□□□□ -0.61
HDDC2-201ENST00000318787 CCL18P55774 89 aa11.25□□□□□ -0.61
HDDC2-201ENST00000318787 TMEM183BQ1AE95 376 aa11.25□□□□□ -0.61
HDDC2-201ENST00000318787 AKR1C8PQ5T2L2 129 aa11.25□□□□□ -0.61
HDDC2-201ENST00000318787 TMEM183AQ8IXX5 376 aa11.25□□□□□ -0.61
HDDC2-201ENST00000318787 TREM1Q9NP99 234 aa11.25□□□□□ -0.61
HDDC2-201ENST00000318787 TMEM167BQ9NRX6 74 aa11.25□□□□□ -0.61
HDDC2-201ENST00000318787 LENEPQ9Y5L5 61 aa11.25□□□□□ -0.61
HDDC2-201ENST00000318787 SUMO1P63165 101 aaKnown RBP11.24□□□□□ -0.61
HDDC2-201ENST00000318787 IBA57Q5T440 356 aaKnown RBP11.24□□□□□ -0.61
HDDC2-201ENST00000318787 C5orf17Q8NAS9 161 aa11.24□□□□□ -0.61
HDDC2-201ENST00000318787 ST6GAL2Q96JF0 529 aa11.24□□□□□ -0.61
HDDC2-201ENST00000318787 NDFIP1Q9BT67 221 aa11.24□□□□□ -0.61
HDDC2-201ENST00000318787 K7EQM0 130 aa11.23□□□□□ -0.61
HDDC2-201ENST00000318787 SPINK4O60575 86 aa11.23□□□□□ -0.61
HDDC2-201ENST00000318787 FGF8P55075 233 aaPredicted RBP11.23□□□□□ -0.61
HDDC2-201ENST00000318787 UBE2G2P60604 165 aa11.23□□□□□ -0.61
HDDC2-201ENST00000318787 Q6AWC8 147 aa11.23□□□□□ -0.61
HDDC2-201ENST00000318787 TMED6Q8WW62 240 aa11.23□□□□□ -0.61
HDDC2-201ENST00000318787 CTXND1A0A1B0GTU2 59 aa11.22□□□□□ -0.61
HDDC2-201ENST00000318787 TAAR5O14804 337 aa11.22□□□□□ -0.61
HDDC2-201ENST00000318787 TCRAP04437 139 aa11.22□□□□□ -0.61
HDDC2-201ENST00000318787 MDFICQ9P1T7 246 aa11.22□□□□□ -0.61
HDDC2-201ENST00000318787 TRGV11A0A075B6L2 103 aa11.21□□□□□ -0.61
HDDC2-201ENST00000318787 GGTLC3B5MD39 225 aa11.21□□□□□ -0.61
HDDC2-201ENST00000318787 ZNF726P1Q15940 193 aa11.21□□□□□ -0.61
HDDC2-201ENST00000318787 PRNTQ86SH4 94 aa11.21□□□□□ -0.61
HDDC2-201ENST00000318787 TVP23CQ96ET8 276 aa11.21□□□□□ -0.61
HDDC2-201ENST00000318787 C8orf49Q96NF6 230 aa11.21□□□□□ -0.61
HDDC2-201ENST00000318787 LINC00588Q9Y4M8 146 aa11.21□□□□□ -0.61
HDDC2-201ENST00000318787 TRAV21A0A0B4J279 112 aa11.2□□□□□ -0.62
HDDC2-201ENST00000318787 IFNA7P01567 189 aa11.2□□□□□ -0.62
HDDC2-201ENST00000318787 LGALS9BQ3B8N2 356 aa11.2□□□□□ -0.62
HDDC2-201ENST00000318787 ZFP69Q49AA0 526 aa11.2□□□□□ -0.62
HDDC2-201ENST00000318787 ARL6IP6Q8N6S5 226 aa11.2□□□□□ -0.62
HDDC2-201ENST00000318787 PSG8Q9UQ74 426 aa11.2□□□□□ -0.62
HDDC2-201ENST00000318787 MUC4Q99102 2169 aa11.2□□□□□ -0.62
HDDC2-201ENST00000318787 SERTM2A0A1B0GWG4 89 aa11.19□□□□□ -0.62
HDDC2-201ENST00000318787 GNRH2O43555 120 aa11.19□□□□□ -0.62
HDDC2-201ENST00000318787 CYB561D1Q8N8Q1 229 aa11.19□□□□□ -0.62
HDDC2-201ENST00000318787 CYTL1Q9NRR1 136 aa11.19□□□□□ -0.62
HDDC2-201ENST00000318787 EPDR1Q9UM22 224 aa11.19□□□□□ -0.62
HDDC2-201ENST00000318787 TRGV4A0A0C4DH28 118 aa11.18□□□□□ -0.62
HDDC2-201ENST00000318787 MAP1LC3B2A6NCE7 125 aa11.18□□□□□ -0.62
HDDC2-201ENST00000318787 PRSS29PA6NIE9 313 aa11.18□□□□□ -0.62
HDDC2-201ENST00000318787 FAM3BP58499 235 aaPredicted RBP11.18□□□□□ -0.62
HDDC2-201ENST00000318787 FLI1Q01543 452 aaPredicted RBP11.18□□□□□ -0.62
HDDC2-201ENST00000318787 LINC00336Q6ZUF6 198 aa11.18□□□□□ -0.62
HDDC2-201ENST00000318787 SUN5Q8TC36 379 aa11.18□□□□□ -0.62
HDDC2-201ENST00000318787 MAP1LC3BQ9GZQ8 125 aa11.18□□□□□ -0.62
HDDC2-201ENST00000318787 SDF2L1Q9HCN8 221 aa11.18□□□□□ -0.62
HDDC2-201ENST00000318787 TRAV34A0A0B4J273 112 aa11.17□□□□□ -0.62
HDDC2-201ENST00000318787 KANTRA0A1W2PQU2 76 aa11.17□□□□□ -0.62
HDDC2-201ENST00000318787 PAX4O43316 350 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms