RNA–Protein interactions for RNA: ENST00000317201.6

HOXA3-201, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXA3, Length 2,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-201ENST00000317201 IGHV4-61A0A0C4DH41 118 aa11.52□□□□□ -0.57
HOXA3-201ENST00000317201 MOSP00540 346 aa11.52□□□□□ -0.57
HOXA3-201ENST00000317201 SLC25A16P16260 332 aa11.52□□□□□ -0.57
HOXA3-201ENST00000317201 SUB1P53999 127 aaKnown RBP eCLIP11.52□□□□□ -0.57
HOXA3-201ENST00000317201 PPP1R27Q86WC6 154 aa11.52□□□□□ -0.57
HOXA3-201ENST00000317201 ZFYVE26Q68DK2 2539 aa11.52□□□□□ -0.57
HOXA3-201ENST00000317201 CGB1A6NKQ9 187 aa11.51□□□□□ -0.57
HOXA3-201ENST00000317201 RHODO00212 210 aa11.51□□□□□ -0.57
HOXA3-201ENST00000317201 NDUFA3O95167 84 aa11.51□□□□□ -0.57
HOXA3-201ENST00000317201 IFITM1P13164 125 aa11.51□□□□□ -0.57
HOXA3-201ENST00000317201 C12orf74Q32Q52 190 aa11.51□□□□□ -0.57
HOXA3-201ENST00000317201 PVRIGQ6DKI7 326 aa11.51□□□□□ -0.57
HOXA3-201ENST00000317201 C1orf159Q96HA4 380 aa11.51□□□□□ -0.57
HOXA3-201ENST00000317201 DKK2Q9UBU2 259 aa11.51□□□□□ -0.57
HOXA3-201ENST00000317201 EPG5Q9HCE0 2579 aa11.51□□□□□ -0.57
HOXA3-201ENST00000317201 A0A1B0GXF2 115 aa11.51□□□□□ -0.57
HOXA3-201ENST00000317201 TGFAP01135 160 aa11.51□□□□□ -0.57
HOXA3-201ENST00000317201 Q6ZQT7 251 aa11.51□□□□□ -0.57
HOXA3-201ENST00000317201 PRSS3P2Q8NHM4 247 aa11.51□□□□□ -0.57
HOXA3-201ENST00000317201 NRGNQ92686 78 aa11.51□□□□□ -0.57
HOXA3-201ENST00000317201 IGHV4-30-2A0A087WSY4 118 aa11.5□□□□□ -0.57
HOXA3-201ENST00000317201 SMIM9A6NGZ8 99 aa11.5□□□□□ -0.57
HOXA3-201ENST00000317201 LINC00694P0DN24 101 aa11.5□□□□□ -0.57
HOXA3-201ENST00000317201 CEND1Q8N111 149 aa11.5□□□□□ -0.57
HOXA3-201ENST00000317201 TPSG1Q9NRR2 321 aa11.5□□□□□ -0.57
HOXA3-201ENST00000317201 MYO18BQ8IUG5 2567 aa11.5□□□□□ -0.57
HOXA3-201ENST00000317201 NBR2O15453 112 aa11.5□□□□□ -0.57
HOXA3-201ENST00000317201 RPL27AP46776 148 aaKnown RBP11.5□□□□□ -0.57
HOXA3-201ENST00000317201 PSMB2P49721 201 aa11.5□□□□□ -0.57
HOXA3-201ENST00000317201 MAP1LC3AQ9H492 121 aa11.5□□□□□ -0.57
HOXA3-201ENST00000317201 KMT2BQ9UMN6 2715 aaPredicted RBP11.49□□□□□ -0.57
HOXA3-201ENST00000317201 E7EUB6 86 aa11.49□□□□□ -0.57
HOXA3-201ENST00000317201 RPL7P18124 248 aaKnown RBP11.49□□□□□ -0.57
HOXA3-201ENST00000317201 CNTFRP26992 372 aa11.49□□□□□ -0.57
HOXA3-201ENST00000317201 WT1-ASQ06250 92 aa11.49□□□□□ -0.57
HOXA3-201ENST00000317201 Q8N6K4 173 aa11.49□□□□□ -0.57
HOXA3-201ENST00000317201 BEX4Q9NWD9 120 aaPredicted RBP11.49□□□□□ -0.57
HOXA3-201ENST00000317201 CENPVL3A0A0U1RRI6 287 aa11.49□□□□□ -0.57
HOXA3-201ENST00000317201 H3BVH4 76 aa11.49□□□□□ -0.57
HOXA3-201ENST00000317201 CFAP126Q5VTH2 177 aa11.49□□□□□ -0.57
HOXA3-201ENST00000317201 LRRC75A-AS1Q8N1F1 130 aa11.49□□□□□ -0.57
HOXA3-201ENST00000317201 CD69Q07108 199 aa11.48□□□□□ -0.57
HOXA3-201ENST00000317201 COL12A1Q99715 3063 aa11.48□□□□□ -0.57
HOXA3-201ENST00000317201 SOX21Q9Y651 276 aaPredicted RBP11.48□□□□□ -0.57
HOXA3-201ENST00000317201 RRN3P1Q2M238 152 aa11.48□□□□□ -0.57
HOXA3-201ENST00000317201 ZNF503Q96F45 646 aa11.48□□□□□ -0.57
HOXA3-201ENST00000317201 TRBV25-1A0A075B6N4 114 aa11.47□□□□□ -0.57
HOXA3-201ENST00000317201 SNCGO76070 127 aa11.47□□□□□ -0.57
HOXA3-201ENST00000317201 IFI27P40305 119 aaPredicted RBP11.47□□□□□ -0.57
HOXA3-201ENST00000317201 SRSF9Q13242 221 aaKnown RBP eCLIP11.47□□□□□ -0.57
HOXA3-201ENST00000317201 ZNF414Q96IQ9 312 aa11.47□□□□□ -0.57
HOXA3-201ENST00000317201 FBXL15Q9H469 300 aa11.47□□□□□ -0.57
HOXA3-201ENST00000317201 LOC107984156A0A0G2JMH3 177 aa11.47□□□□□ -0.57
HOXA3-201ENST00000317201 NPFFO15130 113 aa11.47□□□□□ -0.57
HOXA3-201ENST00000317201 PLA2G2AP14555 144 aa11.47□□□□□ -0.57
HOXA3-201ENST00000317201 SRD5A1P18405 259 aa11.47□□□□□ -0.57
HOXA3-201ENST00000317201 C10orf55Q5SWW7 151 aa11.47□□□□□ -0.57
HOXA3-201ENST00000317201 ARL17AQ8IVW1 177 aa11.47□□□□□ -0.57
HOXA3-201ENST00000317201 DYNAPQ8N1N2 210 aa11.47□□□□□ -0.57
HOXA3-201ENST00000317201 ARHGAP32A7KAX9 2087 aa11.46□□□□□ -0.57
HOXA3-201ENST00000317201 B4DSR2 109 aa11.46□□□□□ -0.58
HOXA3-201ENST00000317201 TEX22C9J3V5 150 aa11.46□□□□□ -0.58
HOXA3-201ENST00000317201 J3QKU1 62 aa11.46□□□□□ -0.58
HOXA3-201ENST00000317201 MSMBP08118 114 aa11.46□□□□□ -0.58
HOXA3-201ENST00000317201 ZNF688P0C7X2 276 aa11.46□□□□□ -0.58
HOXA3-201ENST00000317201 GNG5P63218 68 aa11.46□□□□□ -0.58
HOXA3-201ENST00000317201 LINC00322Q6ZN03 302 aaPredicted RBP11.46□□□□□ -0.58
HOXA3-201ENST00000317201 PPDPFLQ8WWR9 84 aa11.46□□□□□ -0.58
HOXA3-201ENST00000317201 A0A096LNJ9 63 aa11.45□□□□□ -0.58
HOXA3-201ENST00000317201 PLGLAQ15195 96 aa11.45□□□□□ -0.58
HOXA3-201ENST00000317201 ZFP2Q6ZN57 461 aa11.45□□□□□ -0.58
HOXA3-201ENST00000317201 SRSF12Q8WXF0 261 aaKnown RBP11.45□□□□□ -0.58
HOXA3-201ENST00000317201 SAA4P35542 130 aa11.45□□□□□ -0.58
HOXA3-201ENST00000317201 GTSCR1Q86UQ5 136 aa11.45□□□□□ -0.58
HOXA3-201ENST00000317201 ATP5L2Q7Z4Y8 100 aa11.45□□□□□ -0.58
HOXA3-201ENST00000317201 A0A096LNT2 108 aa11.44□□□□□ -0.58
HOXA3-201ENST00000317201 IGHV1-69DA0A0B4J2H0 117 aa11.44□□□□□ -0.58
HOXA3-201ENST00000317201 IGHV1-69P01742 117 aa11.44□□□□□ -0.58
HOXA3-201ENST00000317201 HES1Q14469 280 aa11.44□□□□□ -0.58
HOXA3-201ENST00000317201 TMEM167BQ9NRX6 74 aa11.44□□□□□ -0.58
HOXA3-201ENST00000317201 TNCP24821 2201 aa11.44□□□□□ -0.58
HOXA3-201ENST00000317201 PRB4P10163 310 aaPredicted RBP11.44□□□□□ -0.58
HOXA3-201ENST00000317201 PRR20EP86478 221 aa11.44□□□□□ -0.58
HOXA3-201ENST00000317201 PRR20CP86479 221 aa11.44□□□□□ -0.58
HOXA3-201ENST00000317201 PRR20DP86480 221 aa11.44□□□□□ -0.58
HOXA3-201ENST00000317201 PRR20BP86481 221 aa11.44□□□□□ -0.58
HOXA3-201ENST00000317201 PRR20AP86496 221 aa11.44□□□□□ -0.58
HOXA3-201ENST00000317201 LGALS9BQ3B8N2 356 aa11.44□□□□□ -0.58
HOXA3-201ENST00000317201 LGALS9CQ6DKI2 356 aa11.44□□□□□ -0.58
HOXA3-201ENST00000317201 ATP6V0E2Q8NHE4 81 aa11.44□□□□□ -0.58
HOXA3-201ENST00000317201 HIST1H4GQ99525 98 aa11.43□□□□□ -0.58
HOXA3-201ENST00000317201 CHCHD5Q9BSY4 110 aa11.43□□□□□ -0.58
HOXA3-201ENST00000317201 DEFB113Q30KQ7 82 aa11.42□□□□□ -0.58
HOXA3-201ENST00000317201 FAM19A5Q7Z5A7 132 aaPredicted RBP11.42□□□□□ -0.58
HOXA3-201ENST00000317201 THAP8Q8NA92 274 aa11.42□□□□□ -0.58
HOXA3-201ENST00000317201 TRAV8-2A0A0B4J237 113 aa11.42□□□□□ -0.58
HOXA3-201ENST00000317201 MORN5Q5VZ52 161 aa11.42□□□□□ -0.58
HOXA3-201ENST00000317201 RASL10AQ92737 203 aa11.42□□□□□ -0.58
HOXA3-201ENST00000317201 LINC01356Q8N9X3 169 aa11.41□□□□□ -0.58
HOXA3-201ENST00000317201 TRAV8-1A0A0A6YYK1 113 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms