RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 BUB1B-PAK6H3BSN5 160 aa10.26□□□□□ -0.77
TRIM35-201ENST00000305364 TMEM170BQ5T4T1 132 aa10.26□□□□□ -0.77
TRIM35-201ENST00000305364 CCDC144NLQ6NUI1 221 aa10.26□□□□□ -0.77
TRIM35-201ENST00000305364 ZNF493Q6ZR52 646 aa10.26□□□□□ -0.77
TRIM35-201ENST00000305364 LINC00311Q8N616 119 aa10.26□□□□□ -0.77
TRIM35-201ENST00000305364 MBD3L2Q8NHZ7 208 aaPredicted RBP10.26□□□□□ -0.77
TRIM35-201ENST00000305364 SPRY4Q9C004 299 aa10.26□□□□□ -0.77
TRIM35-201ENST00000305364 EPG5Q9HCE0 2579 aa10.25□□□□□ -0.77
TRIM35-201ENST00000305364 RRN3P1Q2M238 152 aa10.25□□□□□ -0.77
TRIM35-201ENST00000305364 TMEM155Q4W5P6 130 aa10.25□□□□□ -0.77
TRIM35-201ENST00000305364 Q8N8P6 123 aa10.25□□□□□ -0.77
TRIM35-201ENST00000305364 DPM3Q9P2X0 92 aa10.25□□□□□ -0.77
TRIM35-201ENST00000305364 H7C1H1 209 aa10.25□□□□□ -0.77
TRIM35-201ENST00000305364 LINC01560Q8TB33 94 aa10.25□□□□□ -0.77
TRIM35-201ENST00000305364 C16orf92Q96LL3 132 aa10.25□□□□□ -0.77
TRIM35-201ENST00000305364 TEX29Q8N6K0 151 aa10.25□□□□□ -0.77
TRIM35-201ENST00000305364 RNASE6Q93091 150 aaKnown RBP10.25□□□□□ -0.77
TRIM35-201ENST00000305364 BEX4Q9NWD9 120 aaPredicted RBP10.25□□□□□ -0.77
TRIM35-201ENST00000305364 NBEAQ8NFP9 2946 aa10.25□□□□□ -0.77
TRIM35-201ENST00000305364 TTC32Q5I0X7 151 aa10.25□□□□□ -0.77
TRIM35-201ENST00000305364 A8MWV9 139 aa10.24□□□□□ -0.77
TRIM35-201ENST00000305364 SPANXB1Q9NS25 103 aaPredicted RBP10.24□□□□□ -0.77
TRIM35-201ENST00000305364 TRAV8-2A0A0B4J237 113 aa10.24□□□□□ -0.77
TRIM35-201ENST00000305364 B9A039 149 aa10.24□□□□□ -0.77
TRIM35-201ENST00000305364 I3L2K1 104 aa10.24□□□□□ -0.77
TRIM35-201ENST00000305364 REV3LO60673 3130 aa10.24□□□□□ -0.77
TRIM35-201ENST00000305364 C20orf78Q9BR46 151 aa10.24□□□□□ -0.77
TRIM35-201ENST00000305364 DKK4Q9UBT3 224 aa10.24□□□□□ -0.77
TRIM35-201ENST00000305364 A0A096LNJ9 63 aa10.23□□□□□ -0.77
TRIM35-201ENST00000305364 EMP1P54849 157 aa10.23□□□□□ -0.77
TRIM35-201ENST00000305364 RNF182Q8N6D2 247 aa10.23□□□□□ -0.77
TRIM35-201ENST00000305364 CTSZQ9UBR2 303 aa10.23□□□□□ -0.77
TRIM35-201ENST00000305364 TMEM190Q8WZ59 177 aa10.23□□□□□ -0.77
TRIM35-201ENST00000305364 SNCGO76070 127 aa10.23□□□□□ -0.77
TRIM35-201ENST00000305364 PRTN3P24158 256 aa10.23□□□□□ -0.77
TRIM35-201ENST00000305364 FSTL3O95633 263 aa10.22□□□□□ -0.77
TRIM35-201ENST00000305364 CRYBA4P53673 196 aa10.22□□□□□ -0.77
TRIM35-201ENST00000305364 TAL2Q16559 108 aa10.22□□□□□ -0.77
TRIM35-201ENST00000305364 MYMXA0A1B0GTQ4 84 aa10.22□□□□□ -0.77
TRIM35-201ENST00000305364 ORMDL2Q53FV1 153 aa10.22□□□□□ -0.77
TRIM35-201ENST00000305364 IL17RELQ6ZVW7 336 aa10.22□□□□□ -0.77
TRIM35-201ENST00000305364 LINC00574Q9H8X3 128 aa10.22□□□□□ -0.77
TRIM35-201ENST00000305364 FRYQ5TBA9 3013 aa10.22□□□□□ -0.77
TRIM35-201ENST00000305364 K7EIM0 57 aa10.22□□□□□ -0.77
TRIM35-201ENST00000305364 IGFBPL1Q8WX77 278 aa10.22□□□□□ -0.77
TRIM35-201ENST00000305364 ZNF462Q96JM2 2506 aa10.22□□□□□ -0.77
TRIM35-201ENST00000305364 PRSS33Q8NF86 280 aa10.22□□□□□ -0.77
TRIM35-201ENST00000305364 METTL26Q96S19 204 aa10.22□□□□□ -0.77
TRIM35-201ENST00000305364 E9PLD3 99 aa10.21□□□□□ -0.77
TRIM35-201ENST00000305364 ZFAND6Q6FIF0 208 aa10.21□□□□□ -0.77
TRIM35-201ENST00000305364 SHISA9B4DS77 424 aa10.21□□□□□ -0.78
TRIM35-201ENST00000305364 LGALS3P17931 250 aaKnown RBP10.21□□□□□ -0.78
TRIM35-201ENST00000305364 TLN2Q9Y4G6 2542 aa10.21□□□□□ -0.78
TRIM35-201ENST00000305364 A0A087WX48 190 aa10.21□□□□□ -0.78
TRIM35-201ENST00000305364 TEX22C9J3V5 150 aa10.21□□□□□ -0.78
TRIM35-201ENST00000305364 F8VRH5 84 aa10.21□□□□□ -0.78
TRIM35-201ENST00000305364 AGRNO00468 2067 aa10.2□□□□□ -0.78
TRIM35-201ENST00000305364 HLA-DRB4P13762 266 aa10.2□□□□□ -0.78
TRIM35-201ENST00000305364 SLC25A16P16260 332 aa10.2□□□□□ -0.78
TRIM35-201ENST00000305364 HLA-DRB4X5D2U9 266 aa10.2□□□□□ -0.78
TRIM35-201ENST00000305364 FRYLO94915 3013 aa10.2□□□□□ -0.78
TRIM35-201ENST00000305364 TRBV6-1A0A0K0K1D8 114 aa10.2□□□□□ -0.78
TRIM35-201ENST00000305364 PRSS2P07478 247 aa10.2□□□□□ -0.78
TRIM35-201ENST00000305364 CLEC19AQ6UXS0 136 aa10.2□□□□□ -0.78
TRIM35-201ENST00000305364 PRADC1Q9BSG0 188 aa10.2□□□□□ -0.78
TRIM35-201ENST00000305364 CEACAM4O75871 244 aa10.2□□□□□ -0.78
TRIM35-201ENST00000305364 INSL3P51460 131 aa10.2□□□□□ -0.78
TRIM35-201ENST00000305364 ZNF80P51504 273 aaPredicted RBP10.2□□□□□ -0.78
TRIM35-201ENST00000305364 NUP37Q8NFH4 326 aa10.2□□□□□ -0.78
TRIM35-201ENST00000305364 MAPKAPK5-AS1Q8N8E1 139 aa10.19□□□□□ -0.78
TRIM35-201ENST00000305364 KLRD1Q13241 179 aa10.19□□□□□ -0.78
TRIM35-201ENST00000305364 C8orf86Q6ZUL3 223 aa10.19□□□□□ -0.78
TRIM35-201ENST00000305364 DYNAPQ8N1N2 210 aa10.19□□□□□ -0.78
TRIM35-201ENST00000305364 TM2D2Q9BX73 214 aa10.19□□□□□ -0.78
TRIM35-201ENST00000305364 VCX2Q9H322 139 aa10.19□□□□□ -0.78
TRIM35-201ENST00000305364 ZNF48Q96MX3 618 aaPredicted RBP10.19□□□□□ -0.78
TRIM35-201ENST00000305364 PTPRBP23467 1997 aa10.19□□□□□ -0.78
TRIM35-201ENST00000305364 GAS8-AS1O95177 125 aa10.18□□□□□ -0.78
TRIM35-201ENST00000305364 WT1P19544 449 aaPredicted RBP10.18□□□□□ -0.78
TRIM35-201ENST00000305364 FOXI1Q12951 378 aa10.18□□□□□ -0.78
TRIM35-201ENST00000305364 C14orf178Q8N769 122 aaPredicted RBP10.18□□□□□ -0.78
TRIM35-201ENST00000305364 OR10J6PQ8NGY7 276 aa10.18□□□□□ -0.78
TRIM35-201ENST00000305364 GLMPQ8WWB7 406 aa10.18□□□□□ -0.78
TRIM35-201ENST00000305364 PPDPFLQ8WWR9 84 aa10.18□□□□□ -0.78
TRIM35-201ENST00000305364 PTH2Q96A98 100 aa10.18□□□□□ -0.78
TRIM35-201ENST00000305364 TMEM262E9PQX1 116 aa10.18□□□□□ -0.78
TRIM35-201ENST00000305364 C5orf64Q2M2E5 130 aa10.18□□□□□ -0.78
TRIM35-201ENST00000305364 SEM1Q6ZVN7 128 aa10.18□□□□□ -0.78
TRIM35-201ENST00000305364 SLC50A1Q9BRV3 221 aa10.18□□□□□ -0.78
TRIM35-201ENST00000305364 FAM215AQ9Y5M1 114 aa10.18□□□□□ -0.78
TRIM35-201ENST00000305364 TRGV3P03979 118 aa10.18□□□□□ -0.78
TRIM35-201ENST00000305364 GAGE2BQ13066 116 aa10.18□□□□□ -0.78
TRIM35-201ENST00000305364 GAGE2EQ4V326 116 aa10.18□□□□□ -0.78
TRIM35-201ENST00000305364 RAX2Q96IS3 184 aa10.18□□□□□ -0.78
TRIM35-201ENST00000305364 C1QTNF4Q9BXJ3 329 aa10.18□□□□□ -0.78
TRIM35-201ENST00000305364 GAGE2DQ9UEU5 116 aa10.18□□□□□ -0.78
TRIM35-201ENST00000305364 COX6B1P14854 86 aa10.18□□□□□ -0.78
TRIM35-201ENST00000305364 CFHR4Q92496 578 aa10.18□□□□□ -0.78
TRIM35-201ENST00000305364 RNF5Q99942 180 aa10.18□□□□□ -0.78
TRIM35-201ENST00000305364 U3KQK5 164 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms