RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 ATP5L2Q7Z4Y8 100 aa11.03□□□□□ -0.64
SHCBP1-201ENST00000303383 AGPAT4-IT1Q9H0P7 198 aa11.03□□□□□ -0.64
SHCBP1-201ENST00000303383 CDKN1BP46527 198 aa11.03□□□□□ -0.64
SHCBP1-201ENST00000303383 HBBP68871 147 aa11.03□□□□□ -0.64
SHCBP1-201ENST00000303383 SAMD13Q5VXD3 122 aa11.03□□□□□ -0.64
SHCBP1-201ENST00000303383 TMEM136Q6ZRR5 245 aa11.03□□□□□ -0.64
SHCBP1-201ENST00000303383 FABP5P3A8MUU1 101 aa11.02□□□□□ -0.65
SHCBP1-201ENST00000303383 OVOL1O14753 267 aa11.02□□□□□ -0.65
SHCBP1-201ENST00000303383 KIAA1644Q3SXP7 199 aa11.02□□□□□ -0.65
SHCBP1-201ENST00000303383 GFI1BQ5VTD9 330 aa11.02□□□□□ -0.65
SHCBP1-201ENST00000303383 C11orf44Q8N8P7 122 aa11.02□□□□□ -0.65
SHCBP1-201ENST00000303383 OR11H1Q8NG94 326 aa11.02□□□□□ -0.65
SHCBP1-201ENST00000303383 TMEM213A2RRL7 107 aa11.02□□□□□ -0.65
SHCBP1-201ENST00000303383 LINC01619G3V211 115 aa11.02□□□□□ -0.65
SHCBP1-201ENST00000303383 HAX1O00165 279 aa11.02□□□□□ -0.65
SHCBP1-201ENST00000303383 ZNF705DP0CH99 300 aaPredicted RBP11.02□□□□□ -0.65
SHCBP1-201ENST00000303383 ZNF705BP0CI00 300 aaPredicted RBP11.02□□□□□ -0.65
SHCBP1-201ENST00000303383 EDN2P20800 178 aa11.02□□□□□ -0.65
SHCBP1-201ENST00000303383 CRIP1P50238 77 aa11.02□□□□□ -0.65
SHCBP1-201ENST00000303383 GTSF1Q8WW33 167 aa11.02□□□□□ -0.65
SHCBP1-201ENST00000303383 GRIFINA4D1Z8 144 aa11.01□□□□□ -0.65
SHCBP1-201ENST00000303383 HIST1H1AQ02539 215 aaPredicted RBP11.01□□□□□ -0.65
SHCBP1-201ENST00000303383 BAGE3Q86Y29 109 aa11.01□□□□□ -0.65
SHCBP1-201ENST00000303383 LGALS9O00182 355 aa11.01□□□□□ -0.65
SHCBP1-201ENST00000303383 SLURP1P55000 103 aa11.01□□□□□ -0.65
SHCBP1-201ENST00000303383 C18orf65Q6ZTR6 163 aa11.01□□□□□ -0.65
SHCBP1-201ENST00000303383 C20orf173Q96LM9 149 aa11.01□□□□□ -0.65
SHCBP1-201ENST00000303383 FABP4P15090 132 aa11□□□□□ -0.65
SHCBP1-201ENST00000303383 RPS20P60866 119 aaKnown RBP11□□□□□ -0.65
SHCBP1-201ENST00000303383 RIGQ13278 110 aa11□□□□□ -0.65
SHCBP1-201ENST00000303383 Q6AWC8 147 aa11□□□□□ -0.65
SHCBP1-201ENST00000303383 OR1N2Q8NGR9 330 aa11□□□□□ -0.65
SHCBP1-201ENST00000303383 C4orf3Q8WVX3 66 aa11□□□□□ -0.65
SHCBP1-201ENST00000303383 JMJD8Q96S16 334 aa11□□□□□ -0.65
SHCBP1-201ENST00000303383 PRO1933Q9H354 126 aa11□□□□□ -0.65
SHCBP1-201ENST00000303383 LY6G6DO95868 133 aa11□□□□□ -0.65
SHCBP1-201ENST00000303383 RNASE1P07998 156 aaKnown RBP11□□□□□ -0.65
SHCBP1-201ENST00000303383 PYY3Q5JQD4 70 aa11□□□□□ -0.65
SHCBP1-201ENST00000303383 C9orf47Q6ZRZ4 202 aa11□□□□□ -0.65
SHCBP1-201ENST00000303383 SMIM15Q7Z3B0 74 aa11□□□□□ -0.65
SHCBP1-201ENST00000303383 TMEM160Q9NX00 188 aa11□□□□□ -0.65
SHCBP1-201ENST00000303383 PEMTQ9UBM1 199 aa11□□□□□ -0.65
SHCBP1-201ENST00000303383 A0A1B0GUT8 65 aa11□□□□□ -0.65
SHCBP1-201ENST00000303383 A0A1W2PRX2 142 aa11□□□□□ -0.65
SHCBP1-201ENST00000303383 PAFAH1B2P68402 229 aa11□□□□□ -0.65
SHCBP1-201ENST00000303383 HIST3H2BBQ8N257 126 aa11□□□□□ -0.65
SHCBP1-201ENST00000303383 WIPF2Q8TF74 440 aaPredicted RBP11□□□□□ -0.65
SHCBP1-201ENST00000303383 LINC00477Q96M19 166 aa11□□□□□ -0.65
SHCBP1-201ENST00000303383 DUX3Q96PT4 197 aa11□□□□□ -0.65
SHCBP1-201ENST00000303383 ZNF469Q96JG9 3925 aaPredicted RBP11□□□□□ -0.65
SHCBP1-201ENST00000303383 A8MWP6 167 aa10.99□□□□□ -0.65
SHCBP1-201ENST00000303383 SNRPD3P62318 126 aaKnown RBP10.99□□□□□ -0.65
SHCBP1-201ENST00000303383 GAGE1Q13065 139 aa10.99□□□□□ -0.65
SHCBP1-201ENST00000303383 SSBP4Q9BWG4 385 aaPredicted RBP10.99□□□□□ -0.65
SHCBP1-201ENST00000303383 SETD2Q9BYW2 2564 aaPredicted RBP10.99□□□□□ -0.65
SHCBP1-201ENST00000303383 ZNF80P51504 273 aaPredicted RBP10.99□□□□□ -0.65
SHCBP1-201ENST00000303383 C2orf70A6NJV1 201 aa10.99□□□□□ -0.65
SHCBP1-201ENST00000303383 SOCS3O14543 225 aa10.98□□□□□ -0.65
SHCBP1-201ENST00000303383 SRIP30626 198 aa10.98□□□□□ -0.65
SHCBP1-201ENST00000303383 TCTEX1D4Q5JR98 221 aa10.98□□□□□ -0.65
SHCBP1-201ENST00000303383 MS4A6AQ9H2W1 248 aa10.98□□□□□ -0.65
SHCBP1-201ENST00000303383 TSTD3H0UI37 97 aa10.98□□□□□ -0.65
SHCBP1-201ENST00000303383 EREGO14944 169 aa10.98□□□□□ -0.65
SHCBP1-201ENST00000303383 PKIAP61925 76 aa10.98□□□□□ -0.65
SHCBP1-201ENST00000303383 COX8CQ7Z4L0 72 aa10.98□□□□□ -0.65
SHCBP1-201ENST00000303383 OR10D4PQ8NGN7 298 aa10.98□□□□□ -0.65
SHCBP1-201ENST00000303383 ZNF688P0C7X2 276 aa10.97□□□□□ -0.65
SHCBP1-201ENST00000303383 OR8A1Q8NGG7 326 aa10.97□□□□□ -0.65
SHCBP1-201ENST00000303383 DYNLRB2Q8TF09 96 aa10.97□□□□□ -0.65
SHCBP1-201ENST00000303383 PACRGQ96M98 296 aaPredicted RBP10.97□□□□□ -0.65
SHCBP1-201ENST00000303383 F6UB75 175 aa10.97□□□□□ -0.65
SHCBP1-201ENST00000303383 HILS1P60008 231 aa10.97□□□□□ -0.65
SHCBP1-201ENST00000303383 DEFB1P60022 68 aa10.97□□□□□ -0.65
SHCBP1-201ENST00000303383 KLF5Q13887 457 aaPredicted RBP10.97□□□□□ -0.65
SHCBP1-201ENST00000303383 CBY3A6NI87 242 aa10.97□□□□□ -0.65
SHCBP1-201ENST00000303383 ARMS2P0C7Q2 107 aa10.97□□□□□ -0.65
SHCBP1-201ENST00000303383 SLAQ13239 276 aa10.97□□□□□ -0.65
SHCBP1-201ENST00000303383 PSMG4Q5JS54 123 aa10.97□□□□□ -0.65
SHCBP1-201ENST00000303383 HIST2H2BDQ6DRA6 164 aa10.97□□□□□ -0.65
SHCBP1-201ENST00000303383 GPX1P07203 203 aa10.96□□□□□ -0.65
SHCBP1-201ENST00000303383 FER1L6-AS1Q8NA97 138 aa10.96□□□□□ -0.65
SHCBP1-201ENST00000303383 TMEM18Q96B42 140 aa10.96□□□□□ -0.65
SHCBP1-201ENST00000303383 LENEPQ9Y5L5 61 aa10.96□□□□□ -0.65
SHCBP1-201ENST00000303383 COA6Q5JTJ3 125 aaKnown RBP10.96□□□□□ -0.66
SHCBP1-201ENST00000303383 LYZL1Q6UWQ5 148 aa10.96□□□□□ -0.66
SHCBP1-201ENST00000303383 A0A1B0GXF2 115 aa10.96□□□□□ -0.66
SHCBP1-201ENST00000303383 FOXA3P55318 350 aaPredicted RBP10.96□□□□□ -0.66
SHCBP1-201ENST00000303383 PRR31Q5SQ13 230 aa10.96□□□□□ -0.66
SHCBP1-201ENST00000303383 NAGKQ9UJ70 344 aa10.96□□□□□ -0.66
SHCBP1-201ENST00000303383 LINC01006Q8NI28 216 aa10.95□□□□□ -0.66
SHCBP1-201ENST00000303383 WNK1Q9H4A3 2382 aa10.95□□□□□ -0.66
SHCBP1-201ENST00000303383 A0A1B0GUS0 222 aa10.95□□□□□ -0.66
SHCBP1-201ENST00000303383 A0A1B0GW15 77 aa10.95□□□□□ -0.66
SHCBP1-201ENST00000303383 OR9G4Q8NGQ1 327 aa10.95□□□□□ -0.66
SHCBP1-201ENST00000303383 DCANP1Q8TF63 244 aa10.95□□□□□ -0.66
SHCBP1-201ENST00000303383 MUC21A0A0G2JKD1 596 aa10.94□□□□□ -0.66
SHCBP1-201ENST00000303383 MUC21A0A140T8X8 626 aa10.94□□□□□ -0.66
SHCBP1-201ENST00000303383 CD28P10747 220 aa10.94□□□□□ -0.66
SHCBP1-201ENST00000303383 MUC21Q5SSG8 566 aa10.94□□□□□ -0.66
SHCBP1-201ENST00000303383 GDF5OSQ5U4N7 250 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms