RNA–Protein interactions for RNA: ENST00000302445.7

KARS-201, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best) BASIC

Gene KARS, Length 2,005 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-201ENST00000302445 M0QXV9 152 aa10.7□□□□□ -0.7
KARS-201ENST00000302445 LGALS1P09382 135 aaKnown RBP10.7□□□□□ -0.7
KARS-201ENST00000302445 SMCPP49901 116 aaPredicted RBP10.7□□□□□ -0.7
KARS-201ENST00000302445 C5orf64Q2M2E5 130 aa10.7□□□□□ -0.7
KARS-201ENST00000302445 TEN1Q86WV5 123 aa10.7□□□□□ -0.7
KARS-201ENST00000302445 MRPL53Q96EL3 112 aaKnown RBP10.7□□□□□ -0.7
KARS-201ENST00000302445 FANCD2OSQ96PS1 177 aa10.7□□□□□ -0.7
KARS-201ENST00000302445 HIF1ANQ9NWT6 349 aa10.7□□□□□ -0.7
KARS-201ENST00000302445 ERG28Q9UKR5 140 aa10.7□□□□□ -0.7
KARS-201ENST00000302445 GATA1P15976 413 aaPredicted RBP10.69□□□□□ -0.7
KARS-201ENST00000302445 C22orf34Q6ZV56 151 aa10.69□□□□□ -0.7
KARS-201ENST00000302445 NEXN-AS1Q8NBZ9 246 aa10.69□□□□□ -0.7
KARS-201ENST00000302445 WFDC12Q8WWY7 111 aa10.69□□□□□ -0.7
KARS-201ENST00000302445 RNASE6Q93091 150 aaKnown RBP10.69□□□□□ -0.7
KARS-201ENST00000302445 TOMM6Q96B49 74 aa10.69□□□□□ -0.7
KARS-201ENST00000302445 SMIM2Q9BVW6 85 aa10.69□□□□□ -0.7
KARS-201ENST00000302445 SMAD5-AS1Q9Y6J3 95 aa10.69□□□□□ -0.7
KARS-201ENST00000302445 AGRNO00468 2067 aa10.69□□□□□ -0.7
KARS-201ENST00000302445 LINC01549A6NIU2 74 aa10.68□□□□□ -0.7
KARS-201ENST00000302445 TMEM262E9PQX1 116 aa10.68□□□□□ -0.7
KARS-201ENST00000302445 Q5PR19 223 aa10.68□□□□□ -0.7
KARS-201ENST00000302445 RAXQ9Y2V3 346 aa10.68□□□□□ -0.7
KARS-201ENST00000302445 CDX4O14627 284 aaPredicted RBP10.68□□□□□ -0.7
KARS-201ENST00000302445 TMEM78Q5T7P6 136 aa10.68□□□□□ -0.7
KARS-201ENST00000302445 TECTAO75443 2155 aa10.67□□□□□ -0.7
KARS-201ENST00000302445 IGKV3D-20A0A0C4DH25 116 aa10.67□□□□□ -0.7
KARS-201ENST00000302445 IGHV7-4-1A0A0J9YVY3 117 aa10.67□□□□□ -0.7
KARS-201ENST00000302445 IGFL3Q6UXB1 125 aa10.67□□□□□ -0.7
KARS-201ENST00000302445 DYNAPQ8N1N2 210 aa10.67□□□□□ -0.7
KARS-201ENST00000302445 CFHR4Q92496 578 aa10.67□□□□□ -0.7
KARS-201ENST00000302445 TIMM23O14925 209 aa10.67□□□□□ -0.7
KARS-201ENST00000302445 ERCC8Q13216 396 aa10.67□□□□□ -0.7
KARS-201ENST00000302445 NFE4Q86UQ8 179 aa10.67□□□□□ -0.7
KARS-201ENST00000302445 CENPVL3A0A0U1RRI6 287 aa10.66□□□□□ -0.7
KARS-201ENST00000302445 TRGV3P03979 118 aa10.66□□□□□ -0.7
KARS-201ENST00000302445 BSPH1Q075Z2 132 aa10.66□□□□□ -0.7
KARS-201ENST00000302445 PAPPA-AS1Q5QFB9 102 aa10.66□□□□□ -0.7
KARS-201ENST00000302445 ZDBF2Q9HCK1 2354 aa10.65□□□□□ -0.7
KARS-201ENST00000302445 COX6B1P14854 86 aa10.65□□□□□ -0.7
KARS-201ENST00000302445 SCGB3A1Q96QR1 104 aa10.65□□□□□ -0.7
KARS-201ENST00000302445 NBEAQ8NFP9 2946 aa10.65□□□□□ -0.7
KARS-201ENST00000302445 M0R381 172 aa10.65□□□□□ -0.71
KARS-201ENST00000302445 MT-ATP8P03928 68 aa10.65□□□□□ -0.71
KARS-201ENST00000302445 CD7P09564 240 aa10.65□□□□□ -0.71
KARS-201ENST00000302445 EFNA4P52798 201 aa10.65□□□□□ -0.71
KARS-201ENST00000302445 XGP55808 180 aa10.65□□□□□ -0.71
KARS-201ENST00000302445 FAM57AQ8TBR7 257 aa10.65□□□□□ -0.71
KARS-201ENST00000302445 PRADC1Q9BSG0 188 aa10.65□□□□□ -0.71
KARS-201ENST00000302445 DYNLRB1Q9NP97 96 aa10.65□□□□□ -0.71
KARS-201ENST00000302445 PLCE1Q9P212 2302 aa10.65□□□□□ -0.71
KARS-201ENST00000302445 AVPP01185 164 aa10.64□□□□□ -0.71
KARS-201ENST00000302445 CTSGP08311 255 aa10.64□□□□□ -0.71
KARS-201ENST00000302445 ZNF688P0C7X2 276 aa10.64□□□□□ -0.71
KARS-201ENST00000302445 PRB4P10163 310 aaPredicted RBP10.64□□□□□ -0.71
KARS-201ENST00000302445 KLK9Q2XQG4 91 aa10.64□□□□□ -0.71
KARS-201ENST00000302445 DPM3Q9P2X0 92 aa10.64□□□□□ -0.71
KARS-201ENST00000302445 KLK9Q9UKQ9 250 aa10.64□□□□□ -0.71
KARS-201ENST00000302445 MUC6Q6W4X9 2439 aa10.64□□□□□ -0.71
KARS-201ENST00000302445 ZNF815PA8K554 130 aa10.63□□□□□ -0.71
KARS-201ENST00000302445 A8MWV9 139 aa10.63□□□□□ -0.71
KARS-201ENST00000302445 PPP1R17O96001 155 aa10.63□□□□□ -0.71
KARS-201ENST00000302445 COX7A1P24310 79 aa10.63□□□□□ -0.71
KARS-201ENST00000302445 GRNP28799 593 aaKnown RBP10.63□□□□□ -0.71
KARS-201ENST00000302445 LENEPQ9Y5L5 61 aa10.63□□□□□ -0.71
KARS-201ENST00000302445 HLA-DMBP28068 263 aa10.63□□□□□ -0.71
KARS-201ENST00000302445 PSMB2P49721 201 aa10.63□□□□□ -0.71
KARS-201ENST00000302445 SUMO2P61956 95 aaKnown RBP10.63□□□□□ -0.71
KARS-201ENST00000302445 FHL3Q13643 280 aa10.63□□□□□ -0.71
KARS-201ENST00000302445 SPANXN1Q5VSR9 72 aa10.63□□□□□ -0.71
KARS-201ENST00000302445 C9orf47Q6ZRZ4 202 aa10.63□□□□□ -0.71
KARS-201ENST00000302445 IGHV1-69DA0A0B4J2H0 117 aa10.62□□□□□ -0.71
KARS-201ENST00000302445 ASIPP42127 132 aa10.62□□□□□ -0.71
KARS-201ENST00000302445 HERVK_113P61574 105 aa10.62□□□□□ -0.71
KARS-201ENST00000302445 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.62□□□□□ -0.71
KARS-201ENST00000302445 SCGB1D4Q6XE38 83 aa10.62□□□□□ -0.71
KARS-201ENST00000302445 NDUFA11Q86Y39 141 aa10.62□□□□□ -0.71
KARS-201ENST00000302445 LY6G5BQ8NDX9 201 aa10.62□□□□□ -0.71
KARS-201ENST00000302445 BAALCQ8WXS3 180 aa10.62□□□□□ -0.71
KARS-201ENST00000302445 CARD19Q96LW7 228 aa10.62□□□□□ -0.71
KARS-201ENST00000302445 UFC1Q9Y3C8 167 aa10.62□□□□□ -0.71
KARS-201ENST00000302445 PPIFP30405 207 aaKnown RBP10.62□□□□□ -0.71
KARS-201ENST00000302445 SRSF9Q13242 221 aaKnown RBP eCLIP10.62□□□□□ -0.71
KARS-201ENST00000302445 ZFAND6Q6FIF0 208 aa10.62□□□□□ -0.71
KARS-201ENST00000302445 SPANXA1Q9NS26 97 aa10.62□□□□□ -0.71
KARS-201ENST00000302445 C11orf21Q9P2W6 132 aa10.62□□□□□ -0.71
KARS-201ENST00000302445 SVILO95425 2214 aa10.61□□□□□ -0.71
KARS-201ENST00000302445 LOC107984156A0A0G2JMH3 177 aa10.61□□□□□ -0.71
KARS-201ENST00000302445 BUB3O43684 328 aa10.61□□□□□ -0.71
KARS-201ENST00000302445 MED14OSP0DP75 135 aa10.61□□□□□ -0.71
KARS-201ENST00000302445 ARL17AQ8IVW1 177 aa10.61□□□□□ -0.71
KARS-201ENST00000302445 AGPAT4-IT1Q9H0P7 198 aa10.61□□□□□ -0.71
KARS-201ENST00000302445 PRAC2D3DTV9 90 aa10.6□□□□□ -0.71
KARS-201ENST00000302445 SRD5A1P18405 259 aa10.6□□□□□ -0.71
KARS-201ENST00000302445 RPL32P62910 135 aaKnown RBP10.6□□□□□ -0.71
KARS-201ENST00000302445 GAGE5Q13069 117 aa10.6□□□□□ -0.71
KARS-201ENST00000302445 GAGE6Q13070 117 aa10.6□□□□□ -0.71
KARS-201ENST00000302445 LINC01600Q96MT4 127 aa10.6□□□□□ -0.71
KARS-201ENST00000302445 ANAPC13Q9BS18 74 aa10.6□□□□□ -0.71
KARS-201ENST00000302445 S4R3C0 116 aa10.6□□□□□ -0.71
KARS-201ENST00000302445 ZGRF1Q86YA3 2104 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms