RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 MORN3Q6PF18 240 aaPredicted RBP6.9□□□□□ -1.31
RFX3-201ENST00000302303 XCL2Q9UBD3 114 aa6.9□□□□□ -1.31
RFX3-201ENST00000302303 FBN3Q75N90 2809 aa6.89□□□□□ -1.31
RFX3-201ENST00000302303 FBLL1A6NHQ2 334 aaKnown RBP6.89□□□□□ -1.31
RFX3-201ENST00000302303 PRM2P04554 102 aa6.89□□□□□ -1.31
RFX3-201ENST00000302303 CDKN1BP46527 198 aa6.89□□□□□ -1.31
RFX3-201ENST00000302303 BTN1A1Q13410 526 aa6.89□□□□□ -1.31
RFX3-201ENST00000302303 DEFB121Q5J5C9 76 aa6.89□□□□□ -1.31
RFX3-201ENST00000302303 COMMD7Q86VX2 200 aa6.89□□□□□ -1.31
RFX3-201ENST00000302303 SLC7A5P1Q8MH63 180 aa6.89□□□□□ -1.31
RFX3-201ENST00000302303 ZC2HC1AQ96GY0 325 aa6.89□□□□□ -1.31
RFX3-201ENST00000302303 TREM1Q9NP99 234 aa6.89□□□□□ -1.31
RFX3-201ENST00000302303 C11orf21Q9P2W6 132 aa6.89□□□□□ -1.31
RFX3-201ENST00000302303 ZFP30Q9Y2G7 519 aa6.89□□□□□ -1.31
RFX3-201ENST00000302303 C9JCJ5 164 aa6.88□□□□□ -1.31
RFX3-201ENST00000302303 J3KRW8 73 aa6.88□□□□□ -1.31
RFX3-201ENST00000302303 K7EN84 100 aa6.88□□□□□ -1.31
RFX3-201ENST00000302303 K7EQM0 130 aa6.88□□□□□ -1.31
RFX3-201ENST00000302303 CA1P00915 261 aaPredicted RBP6.88□□□□□ -1.31
RFX3-201ENST00000302303 S100A9P06702 114 aaKnown RBP6.88□□□□□ -1.31
RFX3-201ENST00000302303 ADCYAP1P18509 176 aa6.88□□□□□ -1.31
RFX3-201ENST00000302303 CENPWQ5EE01 88 aa6.88□□□□□ -1.31
RFX3-201ENST00000302303 Q6AWC8 147 aa6.88□□□□□ -1.31
RFX3-201ENST00000302303 ZNF705AQ6ZN79 300 aaPredicted RBP6.88□□□□□ -1.31
RFX3-201ENST00000302303 BAGE2Q86Y30 109 aa6.88□□□□□ -1.31
RFX3-201ENST00000302303 TMEM183AQ8IXX5 376 aa6.88□□□□□ -1.31
RFX3-201ENST00000302303 NHLRC2Q8NBF2 726 aa6.88□□□□□ -1.31
RFX3-201ENST00000302303 OCC1Q8TAD7 63 aa6.88□□□□□ -1.31
RFX3-201ENST00000302303 MRAPQ8TCY5 172 aa6.88□□□□□ -1.31
RFX3-201ENST00000302303 RNASE4P34096 147 aaKnown RBP6.87□□□□□ -1.31
RFX3-201ENST00000302303 LEPP41159 167 aa6.87□□□□□ -1.31
RFX3-201ENST00000302303 UBE2G1P62253 170 aa6.87□□□□□ -1.31
RFX3-201ENST00000302303 ZNF674Q2M3X9 581 aa6.87□□□□□ -1.31
RFX3-201ENST00000302303 SAPCD1Q5SSQ6 148 aa6.87□□□□□ -1.31
RFX3-201ENST00000302303 UQCC3Q6UW78 93 aa6.87□□□□□ -1.31
RFX3-201ENST00000302303 Q6ZWC4 215 aa6.87□□□□□ -1.31
RFX3-201ENST00000302303 TM2D3Q9BRN9 247 aa6.87□□□□□ -1.31
RFX3-201ENST00000302303 OVOL2Q9BRP0 275 aa6.87□□□□□ -1.31
RFX3-201ENST00000302303 TENM3Q9P273 2699 aa6.87□□□□□ -1.31
RFX3-201ENST00000302303 TRAV12-3A0A0B4J271 114 aa6.86□□□□□ -1.31
RFX3-201ENST00000302303 TMEM218A2RU14 115 aa6.86□□□□□ -1.31
RFX3-201ENST00000302303 C7orf71A4D174 169 aa6.86□□□□□ -1.31
RFX3-201ENST00000302303 UBE2CO00762 179 aa6.86□□□□□ -1.31
RFX3-201ENST00000302303 GCGP01275 180 aa6.86□□□□□ -1.31
RFX3-201ENST00000302303 AMBPP02760 352 aa6.86□□□□□ -1.31
RFX3-201ENST00000302303 GPX1P07203 203 aa6.86□□□□□ -1.31
RFX3-201ENST00000302303 SFTA3P0C7M3 94 aa6.86□□□□□ -1.31
RFX3-201ENST00000302303 CEBPGP53567 150 aa6.86□□□□□ -1.31
RFX3-201ENST00000302303 APOC4P55056 127 aa6.86□□□□□ -1.31
RFX3-201ENST00000302303 NUTF2P61970 127 aaKnown RBP6.86□□□□□ -1.31
RFX3-201ENST00000302303 LINC00528Q8N1L1 170 aa6.86□□□□□ -1.31
RFX3-201ENST00000302303 RNF183Q96D59 192 aa6.86□□□□□ -1.31
RFX3-201ENST00000302303 RETNQ9HD89 108 aa6.86□□□□□ -1.31
RFX3-201ENST00000302303 X6R8D5 127 aa6.86□□□□□ -1.31
RFX3-201ENST00000302303 C19orf71A6NCJ1 209 aa6.86□□□□□ -1.31
RFX3-201ENST00000302303 ZNF727A8MUV8 499 aa6.86□□□□□ -1.31
RFX3-201ENST00000302303 TSPOP30536 169 aa6.86□□□□□ -1.31
RFX3-201ENST00000302303 GNG4P50150 75 aa6.86□□□□□ -1.31
RFX3-201ENST00000302303 OR5I1Q13606 314 aa6.86□□□□□ -1.31
RFX3-201ENST00000302303 DEFB135Q30KP9 77 aa6.86□□□□□ -1.31
RFX3-201ENST00000302303 SMUG1Q53HV7 270 aa6.86□□□□□ -1.31
RFX3-201ENST00000302303 C10orf91Q5T1B1 145 aa6.86□□□□□ -1.31
RFX3-201ENST00000302303 LINC01551Q86U37 167 aa6.86□□□□□ -1.31
RFX3-201ENST00000302303 SMIM12Q96EX1 92 aa6.86□□□□□ -1.31
RFX3-201ENST00000302303 B9D2Q9BPU9 175 aa6.86□□□□□ -1.31
RFX3-201ENST00000302303 SMIM7Q9BQ49 75 aa6.86□□□□□ -1.31
RFX3-201ENST00000302303 SDF2L1Q9HCN8 221 aa6.86□□□□□ -1.31
RFX3-201ENST00000302303 IGKV3D-20A0A0C4DH25 116 aa6.85□□□□□ -1.31
RFX3-201ENST00000302303 PFN1P07737 140 aaKnown RBP6.85□□□□□ -1.31
RFX3-201ENST00000302303 AZU1P20160 251 aa6.85□□□□□ -1.31
RFX3-201ENST00000302303 RPL23P62829 140 aaKnown RBP6.85□□□□□ -1.31
RFX3-201ENST00000302303 FAM74A3Q4VXF1 159 aa6.85□□□□□ -1.31
RFX3-201ENST00000302303 SOHLH1Q5JUK2 328 aa6.85□□□□□ -1.31
RFX3-201ENST00000302303 C20orf144Q9BQM9 153 aa6.85□□□□□ -1.31
RFX3-201ENST00000302303 C1QTNF4Q9BXJ3 329 aa6.85□□□□□ -1.31
RFX3-201ENST00000302303 TP53TG3Q9ULZ0 132 aa6.85□□□□□ -1.31
RFX3-201ENST00000302303 LY96Q9Y6Y9 160 aa6.85□□□□□ -1.31
RFX3-201ENST00000302303 PLAC8L1A1L4L8 177 aa6.84□□□□□ -1.31
RFX3-201ENST00000302303 FABP5P3A8MUU1 101 aa6.84□□□□□ -1.31
RFX3-201ENST00000302303 SH2D1AO60880 128 aa6.84□□□□□ -1.31
RFX3-201ENST00000302303 INSP01308 110 aa6.84□□□□□ -1.31
RFX3-201ENST00000302303 TMEM241Q24JQ0 296 aa6.84□□□□□ -1.31
RFX3-201ENST00000302303 TDRG1Q3Y452 100 aa6.84□□□□□ -1.31
RFX3-201ENST00000302303 LINC00467Q9BRT7 94 aa6.84□□□□□ -1.31
RFX3-201ENST00000302303 NDFIP1Q9BT67 221 aa6.84□□□□□ -1.31
RFX3-201ENST00000302303 TP53TG1Q9Y2A0 90 aa6.84□□□□□ -1.31
RFX3-201ENST00000302303 TRAV21A0A0B4J279 112 aa6.83□□□□□ -1.32
RFX3-201ENST00000302303 ZNF705GA8MUZ8 300 aaPredicted RBP6.83□□□□□ -1.32
RFX3-201ENST00000302303 SPRY2O43597 315 aa6.83□□□□□ -1.32
RFX3-201ENST00000302303 ANXA2RQ3ZCQ2 193 aa6.83□□□□□ -1.32
RFX3-201ENST00000302303 MUC21Q5SSG8 566 aa6.83□□□□□ -1.32
RFX3-201ENST00000302303 Q8NAQ8 132 aa6.83□□□□□ -1.32
RFX3-201ENST00000302303 RCHY1Q96PM5 261 aa6.83□□□□□ -1.32
RFX3-201ENST00000302303 NEU1Q99519 415 aa6.83□□□□□ -1.32
RFX3-201ENST00000302303 KRBOX1C9JBD0 128 aa6.82□□□□□ -1.32
RFX3-201ENST00000302303 H7BYZ3 331 aa6.82□□□□□ -1.32
RFX3-201ENST00000302303 GNRH2O43555 120 aa6.82□□□□□ -1.32
RFX3-201ENST00000302303 RPL19P84098 196 aaKnown RBP6.82□□□□□ -1.32
RFX3-201ENST00000302303 FAM162BQ5T6X4 162 aa6.82□□□□□ -1.32
RFX3-201ENST00000302303 TMEM256Q8N2U0 113 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms