RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 IGLV2-23P01705 113 aa11.08□□□□□ -0.63
SDC2-201ENST00000302190 GP9P14770 177 aa11.08□□□□□ -0.63
SDC2-201ENST00000302190 EMP1P54849 157 aa11.08□□□□□ -0.63
SDC2-201ENST00000302190 ATP5G2Q06055 141 aa11.08□□□□□ -0.63
SDC2-201ENST00000302190 CR1LQ2VPA4 569 aa11.08□□□□□ -0.64
SDC2-201ENST00000302190 THAP8Q8NA92 274 aa11.08□□□□□ -0.64
SDC2-201ENST00000302190 ZNF48Q96MX3 618 aaPredicted RBP11.08□□□□□ -0.64
SDC2-201ENST00000302190 A0A0G2JLM5 398 aa11.08□□□□□ -0.64
SDC2-201ENST00000302190 SEC11AP67812 179 aa11.08□□□□□ -0.64
SDC2-201ENST00000302190 CRYBA4P53673 196 aa11.07□□□□□ -0.64
SDC2-201ENST00000302190 CDSNQ15517 529 aa11.07□□□□□ -0.64
SDC2-201ENST00000302190 FAM106AQ4KMX7 169 aa11.07□□□□□ -0.64
SDC2-201ENST00000302190 RNASE4P34096 147 aaKnown RBP11.07□□□□□ -0.64
SDC2-201ENST00000302190 JMJD8Q96S16 334 aa11.07□□□□□ -0.64
SDC2-201ENST00000302190 SIGLEC8Q9NYZ4 499 aa11.07□□□□□ -0.64
SDC2-201ENST00000302190 NPYP01303 97 aa11.06□□□□□ -0.64
SDC2-201ENST00000302190 LTAP01374 205 aa11.06□□□□□ -0.64
SDC2-201ENST00000302190 ZC2HC1BQ5TFG8 222 aa11.06□□□□□ -0.64
SDC2-201ENST00000302190 Q6AWC8 147 aa11.06□□□□□ -0.64
SDC2-201ENST00000302190 IL17RELQ6ZVW7 336 aa11.06□□□□□ -0.64
SDC2-201ENST00000302190 TMEM158Q8WZ71 300 aa11.06□□□□□ -0.64
SDC2-201ENST00000302190 EEF1AKMT3Q96AZ1 226 aa11.06□□□□□ -0.64
SDC2-201ENST00000302190 TRAV40A0A0B4J280 105 aa11.05□□□□□ -0.64
SDC2-201ENST00000302190 VWC2LB2RUY7 222 aa11.05□□□□□ -0.64
SDC2-201ENST00000302190 LOXL1Q08397 574 aaPredicted RBP11.05□□□□□ -0.64
SDC2-201ENST00000302190 HSD52Q0P140 79 aa11.05□□□□□ -0.64
SDC2-201ENST00000302190 MRPL51Q4U2R6 128 aaKnown RBP11.05□□□□□ -0.64
SDC2-201ENST00000302190 BPESC1Q9GZL8 116 aa11.05□□□□□ -0.64
SDC2-201ENST00000302190 K7EIM0 57 aa11.05□□□□□ -0.64
SDC2-201ENST00000302190 DKK2Q9UBU2 259 aa11.05□□□□□ -0.64
SDC2-201ENST00000302190 SAA4P35542 130 aa11.05□□□□□ -0.64
SDC2-201ENST00000302190 FASNP49327 2511 aaKnown RBP11.05□□□□□ -0.64
SDC2-201ENST00000302190 ATP6V0E1O15342 81 aa11.04□□□□□ -0.64
SDC2-201ENST00000302190 APOMO95445 188 aa11.04□□□□□ -0.64
SDC2-201ENST00000302190 SMIM13P0DJ93 91 aa11.04□□□□□ -0.64
SDC2-201ENST00000302190 DEFB1P60022 68 aa11.04□□□□□ -0.64
SDC2-201ENST00000302190 LINC00311Q8N616 119 aa11.04□□□□□ -0.64
SDC2-201ENST00000302190 EGR2P11161 476 aaPredicted RBP11.04□□□□□ -0.64
SDC2-201ENST00000302190 KIR3DS1Q14943 382 aa11.04□□□□□ -0.64
SDC2-201ENST00000302190 SCGB3A1Q96QR1 104 aa11.04□□□□□ -0.64
SDC2-201ENST00000302190 ZNF256Q9Y2P7 627 aaPredicted RBP11.04□□□□□ -0.64
SDC2-201ENST00000302190 PCP2Q8IVA1 136 aa11.04□□□□□ -0.64
SDC2-201ENST00000302190 PRR25Q96S07 402 aa11.04□□□□□ -0.64
SDC2-201ENST00000302190 MS4A6AQ9H2W1 248 aa11.04□□□□□ -0.64
SDC2-201ENST00000302190 OR11H12B2RN74 326 aa11.03□□□□□ -0.64
SDC2-201ENST00000302190 ATP5J2P56134 94 aa11.03□□□□□ -0.64
SDC2-201ENST00000302190 FAM104BQ5XKR9 115 aa11.03□□□□□ -0.64
SDC2-201ENST00000302190 ZNF562Q6V9R5 426 aa11.03□□□□□ -0.64
SDC2-201ENST00000302190 C14orf178Q8N769 122 aaPredicted RBP11.03□□□□□ -0.64
SDC2-201ENST00000302190 OR11H1Q8NG94 326 aa11.03□□□□□ -0.64
SDC2-201ENST00000302190 OR5A1Q8NGJ0 315 aa11.03□□□□□ -0.64
SDC2-201ENST00000302190 OR11H2Q8NH07 326 aa11.03□□□□□ -0.64
SDC2-201ENST00000302190 TSSC4Q9Y5U2 329 aaPredicted RBP11.03□□□□□ -0.64
SDC2-201ENST00000302190 ZNF492Q9P255 531 aa11.03□□□□□ -0.64
SDC2-201ENST00000302190 C2orf70A6NJV1 201 aa11.03□□□□□ -0.64
SDC2-201ENST00000302190 KLRB1Q12918 225 aa11.03□□□□□ -0.64
SDC2-201ENST00000302190 TMEM170BQ5T4T1 132 aa11.03□□□□□ -0.64
SDC2-201ENST00000302190 TEX22C9J3V5 150 aa11.02□□□□□ -0.64
SDC2-201ENST00000302190 I3L2K1 104 aa11.02□□□□□ -0.64
SDC2-201ENST00000302190 PRTN3P24158 256 aa11.02□□□□□ -0.64
SDC2-201ENST00000302190 SIGLEC15Q6ZMC9 328 aa11.02□□□□□ -0.64
SDC2-201ENST00000302190 TEX48A0A1B0GUV7 120 aa11.02□□□□□ -0.65
SDC2-201ENST00000302190 C9orf118A6NHY6 69 aa11.02□□□□□ -0.65
SDC2-201ENST00000302190 H3BRN7 92 aa11.02□□□□□ -0.65
SDC2-201ENST00000302190 PSMB2P49721 201 aa11.02□□□□□ -0.65
SDC2-201ENST00000302190 MBD6Q96DN6 1003 aa11.02□□□□□ -0.65
SDC2-201ENST00000302190 ZNF747Q9BV97 191 aa11.02□□□□□ -0.65
SDC2-201ENST00000302190 NEGR1Q7Z3B1 354 aa11.01□□□□□ -0.65
SDC2-201ENST00000302190 C7orf69Q9H7B7 122 aa11.01□□□□□ -0.65
SDC2-201ENST00000302190 IGHV3-64A0A075B6Q5 118 aa11.01□□□□□ -0.65
SDC2-201ENST00000302190 HAX1O00165 279 aa11.01□□□□□ -0.65
SDC2-201ENST00000302190 TNFRSF6BO95407 300 aa11.01□□□□□ -0.65
SDC2-201ENST00000302190 IGLV1-47P01700 117 aa11.01□□□□□ -0.65
SDC2-201ENST00000302190 PRSS2P07478 247 aa11.01□□□□□ -0.65
SDC2-201ENST00000302190 EFNA4P52798 201 aa11.01□□□□□ -0.65
SDC2-201ENST00000302190 FN1P02751 2386 aaKnown RBP11.01□□□□□ -0.65
SDC2-201ENST00000302190 A0A1B0GW15 77 aa11.01□□□□□ -0.65
SDC2-201ENST00000302190 K7EP34 96 aa11.01□□□□□ -0.65
SDC2-201ENST00000302190 CD300EQ496F6 205 aaPredicted RBP11.01□□□□□ -0.65
SDC2-201ENST00000302190 DYNAPQ8N1N2 210 aa11.01□□□□□ -0.65
SDC2-201ENST00000302190 DUX5Q96PT3 197 aa11.01□□□□□ -0.65
SDC2-201ENST00000302190 ZFHX3Q15911 3703 aa11.01□□□□□ -0.65
SDC2-201ENST00000302190 IGHV3OR16-12A0A075B7B8 117 aa11□□□□□ -0.65
SDC2-201ENST00000302190 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11□□□□□ -0.65
SDC2-201ENST00000302190 K7ERJ3 54 aa11□□□□□ -0.65
SDC2-201ENST00000302190 SCGB1A1P11684 91 aa11□□□□□ -0.65
SDC2-201ENST00000302190 UCNP55089 124 aa11□□□□□ -0.65
SDC2-201ENST00000302190 CT83Q5H943 113 aa11□□□□□ -0.65
SDC2-201ENST00000302190 SAMD5Q5TGI4 173 aa11□□□□□ -0.65
SDC2-201ENST00000302190 ZNF418Q8TF45 676 aaPredicted RBP11□□□□□ -0.65
SDC2-201ENST00000302190 NEU4Q8WWR8 484 aaPredicted RBP11□□□□□ -0.65
SDC2-201ENST00000302190 GFRA4Q9GZZ7 299 aa11□□□□□ -0.65
SDC2-201ENST00000302190 GEMIN7Q9H840 131 aaKnown RBP11□□□□□ -0.65
SDC2-201ENST00000302190 HELZ2Q9BYK8 2649 aaKnown RBP11□□□□□ -0.65
SDC2-201ENST00000302190 GAGE12HA6NDE8 117 aa11□□□□□ -0.65
SDC2-201ENST00000302190 PRAC2D3DTV9 90 aa11□□□□□ -0.65
SDC2-201ENST00000302190 ZNF56Q15929 161 aa11□□□□□ -0.65
SDC2-201ENST00000302190 WIPF2Q8TF74 440 aaPredicted RBP11□□□□□ -0.65
SDC2-201ENST00000302190 KAAG1Q9UBP8 84 aa11□□□□□ -0.65
SDC2-201ENST00000302190 CYSLTR1Q9Y271 337 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms