RNA–Protein interactions for RNA: ENST00000301717.8

SPSB3-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-201ENST00000301717 F6UZH7 168 aa12.9□□□□□ -0.34
SPSB3-201ENST00000301717 LGALSLQ3ZCW2 172 aaPredicted RBP12.9□□□□□ -0.34
SPSB3-201ENST00000301717 CCDC28AQ8IWP9 274 aa12.9□□□□□ -0.34
SPSB3-201ENST00000301717 PYGO2Q9BRQ0 406 aa12.9□□□□□ -0.34
SPSB3-201ENST00000301717 MAP1LC3BQ9GZQ8 125 aa12.9□□□□□ -0.34
SPSB3-201ENST00000301717 VPS13DQ5THJ4 4388 aa12.9□□□□□ -0.34
SPSB3-201ENST00000301717 MUC21Q5SSG8 566 aa12.89□□□□□ -0.35
SPSB3-201ENST00000301717 TMED6Q8WW62 240 aa12.89□□□□□ -0.35
SPSB3-201ENST00000301717 GSN-AS1Q9NRJ2 163 aa12.89□□□□□ -0.35
SPSB3-201ENST00000301717 TIMM8BQ9Y5J9 83 aaPredicted RBP12.89□□□□□ -0.35
SPSB3-201ENST00000301717 CBY3A6NI87 242 aa12.88□□□□□ -0.35
SPSB3-201ENST00000301717 TCRAP04437 139 aa12.88□□□□□ -0.35
SPSB3-201ENST00000301717 NMBP08949 121 aa12.88□□□□□ -0.35
SPSB3-201ENST00000301717 ZNF493Q6ZR52 646 aa12.88□□□□□ -0.35
SPSB3-201ENST00000301717 C5orf17Q8NAS9 161 aa12.88□□□□□ -0.35
SPSB3-201ENST00000301717 FAM213BQ8TBF2 198 aa12.88□□□□□ -0.35
SPSB3-201ENST00000301717 SEC11BP0C7V7 166 aa12.88□□□□□ -0.35
SPSB3-201ENST00000301717 C11orf72Q8NBR9 251 aa12.88□□□□□ -0.35
SPSB3-201ENST00000301717 LINC00479Q96M42 142 aa12.88□□□□□ -0.35
SPSB3-201ENST00000301717 EPDR1Q9UM22 224 aa12.88□□□□□ -0.35
SPSB3-201ENST00000301717 RGS13O14921 159 aa12.87□□□□□ -0.35
SPSB3-201ENST00000301717 EIF4E3Q8N5X7 224 aaKnown RBP12.87□□□□□ -0.35
SPSB3-201ENST00000301717 KLF12Q9Y4X4 402 aa12.87□□□□□ -0.35
SPSB3-201ENST00000301717 IGHV1OR15-1A0A075B7D0 117 aa12.86□□□□□ -0.35
SPSB3-201ENST00000301717 TRAV34A0A0B4J273 112 aa12.86□□□□□ -0.35
SPSB3-201ENST00000301717 TRBV7-9A0A0J9YWB2 115 aa12.86□□□□□ -0.35
SPSB3-201ENST00000301717 GAGE12BA1L429 117 aa12.86□□□□□ -0.35
SPSB3-201ENST00000301717 FAM74A7A6NL05 159 aa12.86□□□□□ -0.35
SPSB3-201ENST00000301717 SNURFLB1AK76 121 aa12.86□□□□□ -0.35
SPSB3-201ENST00000301717 GAGE7O76087 117 aa12.86□□□□□ -0.35
SPSB3-201ENST00000301717 IGLV2-11P01706 119 aa12.86□□□□□ -0.35
SPSB3-201ENST00000301717 GAGE12FP0CL80 117 aa12.86□□□□□ -0.35
SPSB3-201ENST00000301717 GAGE12GP0CL81 117 aa12.86□□□□□ -0.35
SPSB3-201ENST00000301717 GAGE12IP0CL82 117 aa12.86□□□□□ -0.35
SPSB3-201ENST00000301717 Q6ZTI0 123 aa12.86□□□□□ -0.35
SPSB3-201ENST00000301717 C8orf49Q96NF6 230 aa12.86□□□□□ -0.35
SPSB3-201ENST00000301717 A0A1W2PRE2 83 aa12.85□□□□□ -0.35
SPSB3-201ENST00000301717 TPT1P13693 172 aaKnown RBP12.85□□□□□ -0.35
SPSB3-201ENST00000301717 TMEM88Q6PEY1 159 aa12.85□□□□□ -0.35
SPSB3-201ENST00000301717 LINC00467Q9BRT7 94 aa12.85□□□□□ -0.35
SPSB3-201ENST00000301717 TREM1Q9NP99 234 aa12.85□□□□□ -0.35
SPSB3-201ENST00000301717 NAGKQ9UJ70 344 aa12.85□□□□□ -0.35
SPSB3-201ENST00000301717 PSG8Q9UQ74 426 aa12.85□□□□□ -0.35
SPSB3-201ENST00000301717 IFNA7P01567 189 aa12.84□□□□□ -0.35
SPSB3-201ENST00000301717 Q6AWC8 147 aa12.84□□□□□ -0.35
SPSB3-201ENST00000301717 PRNTQ86SH4 94 aa12.84□□□□□ -0.35
SPSB3-201ENST00000301717 ARL6IP6Q8N6S5 226 aa12.84□□□□□ -0.35
SPSB3-201ENST00000301717 STOML3Q8TAV4 291 aa12.84□□□□□ -0.35
SPSB3-201ENST00000301717 SFT2D1Q8WV19 159 aa12.84□□□□□ -0.35
SPSB3-201ENST00000301717 LENEPQ9Y5L5 61 aa12.84□□□□□ -0.35
SPSB3-201ENST00000301717 F5H768 121 aa12.83□□□□□ -0.36
SPSB3-201ENST00000301717 ATP5G3P48201 142 aa12.83□□□□□ -0.36
SPSB3-201ENST00000301717 ZNF80P51504 273 aaPredicted RBP12.83□□□□□ -0.36
SPSB3-201ENST00000301717 ANXA2RQ3ZCQ2 193 aa12.83□□□□□ -0.36
SPSB3-201ENST00000301717 LGALS9CQ6DKI2 356 aa12.83□□□□□ -0.36
SPSB3-201ENST00000301717 CYB561D1Q8N8Q1 229 aa12.83□□□□□ -0.36
SPSB3-201ENST00000301717 ATG101Q9BSB4 218 aa12.83□□□□□ -0.36
SPSB3-201ENST00000301717 NDUFAF3Q9BU61 184 aa12.83□□□□□ -0.36
SPSB3-201ENST00000301717 UMAD1C9J7I0 102 aa12.82□□□□□ -0.36
SPSB3-201ENST00000301717 FLI1Q01543 452 aaPredicted RBP12.82□□□□□ -0.36
SPSB3-201ENST00000301717 LINC00612Q8N6U2 182 aa12.82□□□□□ -0.36
SPSB3-201ENST00000301717 ZNF680Q8NEM1 530 aa12.82□□□□□ -0.36
SPSB3-201ENST00000301717 MBD3L1Q8WWY6 194 aa12.82□□□□□ -0.36
SPSB3-201ENST00000301717 MDFICQ9P1T7 246 aa12.82□□□□□ -0.36
SPSB3-201ENST00000301717 TRGV1A0A0A0MS02 117 aa12.81□□□□□ -0.36
SPSB3-201ENST00000301717 PEX7O00628 323 aa12.81□□□□□ -0.36
SPSB3-201ENST00000301717 ATP5G1P05496 136 aa12.81□□□□□ -0.36
SPSB3-201ENST00000301717 TCL1AP56279 114 aa12.81□□□□□ -0.36
SPSB3-201ENST00000301717 TCTAP57738 103 aa12.81□□□□□ -0.36
SPSB3-201ENST00000301717 EIF5AP63241 154 aaKnown RBP12.81□□□□□ -0.36
SPSB3-201ENST00000301717 DAZ2Q13117 558 aaKnown RBP12.81□□□□□ -0.36
SPSB3-201ENST00000301717 TMEM183BQ1AE95 376 aa12.81□□□□□ -0.36
SPSB3-201ENST00000301717 TMEM183AQ8IXX5 376 aa12.81□□□□□ -0.36
SPSB3-201ENST00000301717 C9orf62Q8N4C0 152 aa12.81□□□□□ -0.36
SPSB3-201ENST00000301717 MRPL16Q9NX20 251 aaKnown RBP12.81□□□□□ -0.36
SPSB3-201ENST00000301717 C11orf21Q9P2W6 132 aa12.81□□□□□ -0.36
SPSB3-201ENST00000301717 SERTM2A0A1B0GWG4 89 aa12.8□□□□□ -0.36
SPSB3-201ENST00000301717 GNRH2O43555 120 aa12.8□□□□□ -0.36
SPSB3-201ENST00000301717 PAGE4O60829 102 aa12.8□□□□□ -0.36
SPSB3-201ENST00000301717 NKX2-5P52952 324 aaPredicted RBP12.8□□□□□ -0.36
SPSB3-201ENST00000301717 CST9LP1Q5W188 147 aa12.8□□□□□ -0.36
SPSB3-201ENST00000301717 TMEM75Q8N9X5 138 aa12.8□□□□□ -0.36
SPSB3-201ENST00000301717 K7EQM0 130 aa12.79□□□□□ -0.36
SPSB3-201ENST00000301717 HOXA5P20719 270 aa12.79□□□□□ -0.36
SPSB3-201ENST00000301717 FAM159AQ6UWV7 190 aa12.79□□□□□ -0.36
SPSB3-201ENST00000301717 NDFIP1Q9BT67 221 aa12.79□□□□□ -0.36
SPSB3-201ENST00000301717 TRAV21A0A0B4J279 112 aa12.79□□□□□ -0.36
SPSB3-201ENST00000301717 GCGP01275 180 aa12.79□□□□□ -0.36
SPSB3-201ENST00000301717 H2AFB1P0C5Y9 115 aa12.79□□□□□ -0.36
SPSB3-201ENST00000301717 CCL20P78556 96 aa12.79□□□□□ -0.36
SPSB3-201ENST00000301717 IBA57Q5T440 356 aaKnown RBP12.79□□□□□ -0.36
SPSB3-201ENST00000301717 ARL2-SNX15V9GYD0 113 aa12.79□□□□□ -0.36
SPSB3-201ENST00000301717 SPINK4O60575 86 aa12.78□□□□□ -0.36
SPSB3-201ENST00000301717 ZNF415Q09FC8 603 aa12.78□□□□□ -0.36
SPSB3-201ENST00000301717 OR5I1Q13606 314 aa12.78□□□□□ -0.36
SPSB3-201ENST00000301717 DPPA3Q6W0C5 159 aa12.78□□□□□ -0.36
SPSB3-201ENST00000301717 Q86TA4 180 aa12.78□□□□□ -0.36
SPSB3-201ENST00000301717 TRGV2A0A075B6R0 118 aa12.77□□□□□ -0.37
SPSB3-201ENST00000301717 IGHV3-53P01767 116 aa12.77□□□□□ -0.37
SPSB3-201ENST00000301717 TYMSP04818 313 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms