RNA–Protein interactions for RNA: ENST00000300413.9

SNRPD1-201, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD1, Length 4,909 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-201ENST00000300413 CIDEAO60543 219 aa6.42□□□□□ -1.38
SNRPD1-201ENST00000300413 PATE2Q6UY27 113 aa6.42□□□□□ -1.38
SNRPD1-201ENST00000300413 CITED2Q99967 270 aaPredicted RBP6.42□□□□□ -1.38
SNRPD1-201ENST00000300413 KLK15Q9H2R5 256 aa6.42□□□□□ -1.38
SNRPD1-201ENST00000300413 SEC11AP67812 179 aa6.42□□□□□ -1.38
SNRPD1-201ENST00000300413 CYYR1Q96J86 154 aa6.42□□□□□ -1.38
SNRPD1-201ENST00000300413 XCL2Q9UBD3 114 aa6.42□□□□□ -1.38
SNRPD1-201ENST00000300413 E7EUB6 86 aa6.41□□□□□ -1.38
SNRPD1-201ENST00000300413 PET117Q6UWS5 81 aa6.41□□□□□ -1.38
SNRPD1-201ENST00000300413 TMEM238LA0A1B0GVL6 79 aa6.41□□□□□ -1.38
SNRPD1-201ENST00000300413 A6NJY4 79 aa6.41□□□□□ -1.38
SNRPD1-201ENST00000300413 LINC00614P0C842 121 aa6.41□□□□□ -1.38
SNRPD1-201ENST00000300413 ERASQ7Z444 233 aa6.41□□□□□ -1.38
SNRPD1-201ENST00000300413 MIEN1Q9BRT3 115 aa6.41□□□□□ -1.38
SNRPD1-201ENST00000300413 NAV3Q8IVL0 2385 aa6.41□□□□□ -1.38
SNRPD1-201ENST00000300413 SETD2Q9BYW2 2564 aaPredicted RBP6.41□□□□□ -1.38
SNRPD1-201ENST00000300413 DOCK11Q5JSL3 2073 aa6.41□□□□□ -1.38
SNRPD1-201ENST00000300413 DEFB136Q30KP8 78 aa6.41□□□□□ -1.38
SNRPD1-201ENST00000300413 ZNF876PQ49A33 203 aa6.41□□□□□ -1.38
SNRPD1-201ENST00000300413 FAM167A-AS1Q96KT0 104 aa6.41□□□□□ -1.38
SNRPD1-201ENST00000300413 CCDC140Q96MF4 163 aa6.41□□□□□ -1.38
SNRPD1-201ENST00000300413 ODF3Q96PU9 254 aa6.41□□□□□ -1.38
SNRPD1-201ENST00000300413 ZNF256Q9Y2P7 627 aaPredicted RBP6.41□□□□□ -1.38
SNRPD1-201ENST00000300413 LRRK2Q5S007 2527 aa6.41□□□□□ -1.38
SNRPD1-201ENST00000300413 LOC102724200A0A096LPH7 203 aaPredicted RBP6.4□□□□□ -1.38
SNRPD1-201ENST00000300413 CXCL1P09341 107 aa6.4□□□□□ -1.38
SNRPD1-201ENST00000300413 LGALS3P17931 250 aaKnown RBP6.4□□□□□ -1.38
SNRPD1-201ENST00000300413 PPIFP30405 207 aaKnown RBP6.4□□□□□ -1.38
SNRPD1-201ENST00000300413 DAD1P61803 113 aa6.4□□□□□ -1.38
SNRPD1-201ENST00000300413 C10orf91Q5T1B1 145 aa6.4□□□□□ -1.38
SNRPD1-201ENST00000300413 C9orf47Q6ZRZ4 202 aa6.4□□□□□ -1.38
SNRPD1-201ENST00000300413 C1orf229Q6ZS94 237 aaPredicted RBP6.4□□□□□ -1.38
SNRPD1-201ENST00000300413 ZNF702PQ9H963 129 aa6.4□□□□□ -1.38
SNRPD1-201ENST00000300413 KRTAP10-9P60411 292 aa6.4□□□□□ -1.38
SNRPD1-201ENST00000300413 AGPAT4-IT1Q9H0P7 198 aa6.4□□□□□ -1.38
SNRPD1-201ENST00000300413 VCX2Q9H322 139 aa6.4□□□□□ -1.38
SNRPD1-201ENST00000300413 KNCNA6PVL3 124 aa6.4□□□□□ -1.39
SNRPD1-201ENST00000300413 ZNF324O75467 553 aaPredicted RBP6.4□□□□□ -1.39
SNRPD1-201ENST00000300413 MED14OSP0DP75 135 aa6.4□□□□□ -1.39
SNRPD1-201ENST00000300413 ADMP35318 185 aa6.4□□□□□ -1.39
SNRPD1-201ENST00000300413 FXYD7P58549 80 aa6.4□□□□□ -1.39
SNRPD1-201ENST00000300413 LAGE3Q14657 143 aa6.4□□□□□ -1.39
SNRPD1-201ENST00000300413 HIST2H2BCQ6DN03 193 aa6.4□□□□□ -1.39
SNRPD1-201ENST00000300413 C1orf159Q96HA4 380 aa6.4□□□□□ -1.39
SNRPD1-201ENST00000300413 MUC21A0A0G2JKD1 596 aa6.39□□□□□ -1.39
SNRPD1-201ENST00000300413 MUC21A0A140T8X8 626 aa6.39□□□□□ -1.39
SNRPD1-201ENST00000300413 ATRAIDQ6UW56 229 aa6.39□□□□□ -1.39
SNRPD1-201ENST00000300413 LINC00479Q96M42 142 aa6.39□□□□□ -1.39
SNRPD1-201ENST00000300413 PCSK5Q92824 1860 aa6.39□□□□□ -1.39
SNRPD1-201ENST00000300413 IGKV1D-37A0A075B6S9 117 aa6.39□□□□□ -1.39
SNRPD1-201ENST00000300413 IGKV1OR2-108A0A075B7D4 117 aa6.39□□□□□ -1.39
SNRPD1-201ENST00000300413 TYMSP04818 313 aa6.39□□□□□ -1.39
SNRPD1-201ENST00000300413 IGLC2P0DOY2 106 aa6.39□□□□□ -1.39
SNRPD1-201ENST00000300413 PSMB8P28062 276 aa6.39□□□□□ -1.39
SNRPD1-201ENST00000300413 Q1RN00 199 aa6.39□□□□□ -1.39
SNRPD1-201ENST00000300413 TRANK1O15050 2925 aa6.39□□□□□ -1.39
SNRPD1-201ENST00000300413 SZT2Q5T011 3432 aa6.39□□□□□ -1.39
SNRPD1-201ENST00000300413 M0R2P5 195 aa6.39□□□□□ -1.39
SNRPD1-201ENST00000300413 CRPP02741 224 aa6.39□□□□□ -1.39
SNRPD1-201ENST00000300413 SRSF9Q13242 221 aaKnown RBP eCLIP6.39□□□□□ -1.39
SNRPD1-201ENST00000300413 ANXA2RQ3ZCQ2 193 aa6.39□□□□□ -1.39
SNRPD1-201ENST00000300413 UTF1Q5T230 341 aa6.39□□□□□ -1.39
SNRPD1-201ENST00000300413 C16orf74Q96GX8 76 aa6.39□□□□□ -1.39
SNRPD1-201ENST00000300413 KLF12Q9Y4X4 402 aa6.39□□□□□ -1.39
SNRPD1-201ENST00000300413 HIVEP3Q5T1R4 2406 aa6.39□□□□□ -1.39
SNRPD1-201ENST00000300413 ARFGEF3Q5TH69 2177 aa6.39□□□□□ -1.39
SNRPD1-201ENST00000300413 SMIM27A0A1W2PRY6 76 aa6.39□□□□□ -1.39
SNRPD1-201ENST00000300413 UBE2CO00762 179 aa6.39□□□□□ -1.39
SNRPD1-201ENST00000300413 IGLV1-40P01703 118 aa6.39□□□□□ -1.39
SNRPD1-201ENST00000300413 PRSS2P07478 247 aa6.39□□□□□ -1.39
SNRPD1-201ENST00000300413 GZMBP10144 247 aa6.39□□□□□ -1.39
SNRPD1-201ENST00000300413 SUMO2P61956 95 aaKnown RBP6.39□□□□□ -1.39
SNRPD1-201ENST00000300413 DMRTA1Q5VZB9 504 aa6.39□□□□□ -1.39
SNRPD1-201ENST00000300413 OR11H2Q8NH07 326 aa6.39□□□□□ -1.39
SNRPD1-201ENST00000300413 A6NDN8 102 aa6.38□□□□□ -1.39
SNRPD1-201ENST00000300413 CRLF1O75462 422 aa6.38□□□□□ -1.39
SNRPD1-201ENST00000300413 IGF2BP2-AS1Q96M15 143 aa6.38□□□□□ -1.39
SNRPD1-201ENST00000300413 C8orf49Q96NF6 230 aa6.38□□□□□ -1.39
SNRPD1-201ENST00000300413 VGLL1Q99990 258 aa6.38□□□□□ -1.39
SNRPD1-201ENST00000300413 CD28P10747 220 aa6.38□□□□□ -1.39
SNRPD1-201ENST00000300413 HOXA5P20719 270 aa6.38□□□□□ -1.39
SNRPD1-201ENST00000300413 SSBP4Q9BWG4 385 aaPredicted RBP6.38□□□□□ -1.39
SNRPD1-201ENST00000300413 A0A087WX48 190 aa6.38□□□□□ -1.39
SNRPD1-201ENST00000300413 COLCA2A8K830 154 aa6.38□□□□□ -1.39
SNRPD1-201ENST00000300413 AZU1P20160 251 aa6.38□□□□□ -1.39
SNRPD1-201ENST00000300413 SH2D6Q7Z4S9 175 aa6.38□□□□□ -1.39
SNRPD1-201ENST00000300413 ZC2HC1AQ96GY0 325 aa6.38□□□□□ -1.39
SNRPD1-201ENST00000300413 CHCHD5Q9BSY4 110 aa6.38□□□□□ -1.39
SNRPD1-201ENST00000300413 USP9XQ93008 2570 aaPredicted RBP6.38□□□□□ -1.39
SNRPD1-201ENST00000300413 D6R8Y8 96 aa6.38□□□□□ -1.39
SNRPD1-201ENST00000300413 FAM104BQ5XKR9 115 aa6.38□□□□□ -1.39
SNRPD1-201ENST00000300413 CSTL1Q9H114 145 aa6.38□□□□□ -1.39
SNRPD1-201ENST00000300413 C16orf95Q9H693 158 aa6.38□□□□□ -1.39
SNRPD1-201ENST00000300413 V9GYV3 84 aa6.38□□□□□ -1.39
SNRPD1-201ENST00000300413 ADARB2-AS1A8MUL3 147 aa6.37□□□□□ -1.39
SNRPD1-201ENST00000300413 A8MWP6 167 aa6.37□□□□□ -1.39
SNRPD1-201ENST00000300413 K7EMI3 77 aa6.37□□□□□ -1.39
SNRPD1-201ENST00000300413 JOSD1Q15040 202 aaPredicted RBP6.37□□□□□ -1.39
SNRPD1-201ENST00000300413 C14orf178Q8N769 122 aaPredicted RBP6.37□□□□□ -1.39
SNRPD1-201ENST00000300413 MRPL36Q9P0J6 103 aaKnown RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms