RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 OR4C46A6NHA9 309 aa15.55■□□□□ 0.08
SMCO4-201ENST00000298966 C9orf47Q6ZRZ4 202 aa15.55■□□□□ 0.08
SMCO4-201ENST00000298966 MLST8Q9BVC4 326 aa15.55■□□□□ 0.08
SMCO4-201ENST00000298966 LENEPQ9Y5L5 61 aa15.55■□□□□ 0.08
SMCO4-201ENST00000298966 HLA-DMBP28068 263 aa15.54■□□□□ 0.08
SMCO4-201ENST00000298966 CMC4P56277 68 aaPredicted RBP15.54■□□□□ 0.08
SMCO4-201ENST00000298966 COX8CQ7Z4L0 72 aa15.54■□□□□ 0.08
SMCO4-201ENST00000298966 RNF182Q8N6D2 247 aa15.54■□□□□ 0.08
SMCO4-201ENST00000298966 OR10J6PQ8NGY7 276 aa15.54■□□□□ 0.08
SMCO4-201ENST00000298966 YPEL4Q96NS1 127 aa15.54■□□□□ 0.08
SMCO4-201ENST00000298966 OSTCQ9NRP0 149 aa15.54■□□□□ 0.08
SMCO4-201ENST00000298966 DNAH10Q8IVF4 4471 aa15.54■□□□□ 0.08
SMCO4-201ENST00000298966 TRBV7-9A0A0J9YWB2 115 aa15.53■□□□□ 0.08
SMCO4-201ENST00000298966 TMEM78Q5T7P6 136 aa15.53■□□□□ 0.08
SMCO4-201ENST00000298966 IGFL4Q6B9Z1 124 aa15.53■□□□□ 0.08
SMCO4-201ENST00000298966 PRNTQ86SH4 94 aa15.53■□□□□ 0.08
SMCO4-201ENST00000298966 TMEM61Q8N0U2 210 aa15.53■□□□□ 0.08
SMCO4-201ENST00000298966 OR10G8Q8NGN5 311 aa15.53■□□□□ 0.08
SMCO4-201ENST00000298966 LINC00477Q96M19 166 aa15.53■□□□□ 0.08
SMCO4-201ENST00000298966 PCLOQ9Y6V0 5065 aa15.53■□□□□ 0.08
SMCO4-201ENST00000298966 IGKV3-7A0A075B6H7 116 aa15.52■□□□□ 0.08
SMCO4-201ENST00000298966 MGST1P10620 155 aaKnown RBP15.52■□□□□ 0.08
SMCO4-201ENST00000298966 FAM231DQ6ZW35 169 aa15.52■□□□□ 0.08
SMCO4-201ENST00000298966 GBGT1Q8N5D6 347 aa15.52■□□□□ 0.08
SMCO4-201ENST00000298966 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.52■□□□□ 0.08
SMCO4-201ENST00000298966 IMMP2LQ96T52 175 aa15.52■□□□□ 0.08
SMCO4-201ENST00000298966 IGKV2-40A0A087WW87 121 aaPredicted RBP15.51■□□□□ 0.07
SMCO4-201ENST00000298966 TRAV8-1A0A0A6YYK1 113 aa15.51■□□□□ 0.07
SMCO4-201ENST00000298966 IZUMO1RA6ND01 250 aa15.51■□□□□ 0.07
SMCO4-201ENST00000298966 COLCA2A8K830 154 aa15.51■□□□□ 0.07
SMCO4-201ENST00000298966 ZNF705FA8MVS1 300 aaPredicted RBP15.51■□□□□ 0.07
SMCO4-201ENST00000298966 IGKV2D-40P01614 121 aaPredicted RBP15.51■□□□□ 0.07
SMCO4-201ENST00000298966 CD300EQ496F6 205 aaPredicted RBP15.51■□□□□ 0.07
SMCO4-201ENST00000298966 C20orf173Q96LM9 149 aa15.51■□□□□ 0.07
SMCO4-201ENST00000298966 ZNF492Q9P255 531 aa15.51■□□□□ 0.07
SMCO4-201ENST00000298966 NPIPB6E9PJ23 425 aa15.5■□□□□ 0.07
SMCO4-201ENST00000298966 CT45A10P0DMU9 189 aa15.5■□□□□ 0.07
SMCO4-201ENST00000298966 ZNF138P52744 262 aa15.5■□□□□ 0.07
SMCO4-201ENST00000298966 ERVFC1-1P60608 527 aa15.5■□□□□ 0.07
SMCO4-201ENST00000298966 OR5I1Q13606 314 aa15.5■□□□□ 0.07
SMCO4-201ENST00000298966 WFDC3Q8IUB2 231 aa15.5■□□□□ 0.07
SMCO4-201ENST00000298966 OR8A1Q8NGG7 326 aa15.5■□□□□ 0.07
SMCO4-201ENST00000298966 SGK494Q96LW2 274 aa15.5■□□□□ 0.07
SMCO4-201ENST00000298966 S100PP25815 95 aa15.49■□□□□ 0.07
SMCO4-201ENST00000298966 NHLRC2Q8NBF2 726 aa15.49■□□□□ 0.07
SMCO4-201ENST00000298966 PRAC2D3DTV9 90 aa15.48■□□□□ 0.07
SMCO4-201ENST00000298966 DUSP14O95147 198 aaKnown RBP15.48■□□□□ 0.07
SMCO4-201ENST00000298966 PFN1P07737 140 aaKnown RBP15.48■□□□□ 0.07
SMCO4-201ENST00000298966 TFPI2P48307 235 aa15.48■□□□□ 0.07
SMCO4-201ENST00000298966 ELOBQ15370 118 aa15.48■□□□□ 0.07
SMCO4-201ENST00000298966 IBA57Q5T440 356 aaKnown RBP15.48■□□□□ 0.07
SMCO4-201ENST00000298966 EBLN2Q6P2I7 272 aa15.48■□□□□ 0.07
SMCO4-201ENST00000298966 FOXI2Q6ZQN5 318 aa15.48■□□□□ 0.07
SMCO4-201ENST00000298966 FAM24BQ8N5W8 94 aa15.48■□□□□ 0.07
SMCO4-201ENST00000298966 DEFB125Q8N687 156 aa15.48■□□□□ 0.07
SMCO4-201ENST00000298966 ODF3Q96PU9 254 aa15.48■□□□□ 0.07
SMCO4-201ENST00000298966 VGLL1Q99990 258 aa15.48■□□□□ 0.07
SMCO4-201ENST00000298966 SRD5A3Q9H8P0 318 aa15.48■□□□□ 0.07
SMCO4-201ENST00000298966 ZNF688P0C7X2 276 aa15.47■□□□□ 0.07
SMCO4-201ENST00000298966 PSMG4Q5JS54 123 aa15.47■□□□□ 0.07
SMCO4-201ENST00000298966 KCNIP4Q6PIL6 250 aa15.47■□□□□ 0.07
SMCO4-201ENST00000298966 AGPAT4-IT1Q9H0P7 198 aa15.47■□□□□ 0.07
SMCO4-201ENST00000298966 V9GYV3 84 aa15.47■□□□□ 0.07
SMCO4-201ENST00000298966 TRBV24-1A0A075B6N3 115 aa15.46■□□□□ 0.07
SMCO4-201ENST00000298966 SMUG1Q53HV7 270 aa15.46■□□□□ 0.07
SMCO4-201ENST00000298966 OR4B1Q8NGF8 309 aa15.46■□□□□ 0.07
SMCO4-201ENST00000298966 DAZAP1Q96EP5 407 aaKnown RBP15.46■□□□□ 0.07
SMCO4-201ENST00000298966 BTF3L4Q96K17 158 aa15.46■□□□□ 0.07
SMCO4-201ENST00000298966 RNASE7Q9H1E1 156 aaKnown RBP15.46■□□□□ 0.07
SMCO4-201ENST00000298966 TRAV9-1A0A075B6T8 112 aa15.45■□□□□ 0.06
SMCO4-201ENST00000298966 C19orf71A6NCJ1 209 aa15.45■□□□□ 0.06
SMCO4-201ENST00000298966 NUPR2A6NF83 97 aa15.45■□□□□ 0.06
SMCO4-201ENST00000298966 CD7P09564 240 aa15.45■□□□□ 0.06
SMCO4-201ENST00000298966 PYGO2Q9BRQ0 406 aa15.45■□□□□ 0.06
SMCO4-201ENST00000298966 SAV1Q9H4B6 383 aaPredicted RBP15.45■□□□□ 0.06
SMCO4-201ENST00000298966 IL36BQ9NZH7 164 aa15.45■□□□□ 0.06
SMCO4-201ENST00000298966 URGCP-MRPS24S4R325 110 aa15.45■□□□□ 0.06
SMCO4-201ENST00000298966 OR11H12B2RN74 326 aa15.44■□□□□ 0.06
SMCO4-201ENST00000298966 HIST1H1AQ02539 215 aaPredicted RBP15.44■□□□□ 0.06
SMCO4-201ENST00000298966 CT83Q5H943 113 aa15.44■□□□□ 0.06
SMCO4-201ENST00000298966 NUDT10Q8NFP7 164 aa15.44■□□□□ 0.06
SMCO4-201ENST00000298966 NUDT11Q96G61 164 aa15.44■□□□□ 0.06
SMCO4-201ENST00000298966 WFDC10AQ9H1F0 79 aa15.44■□□□□ 0.06
SMCO4-201ENST00000298966 KMT2AQ03164 3969 aa15.44■□□□□ 0.06
SMCO4-201ENST00000298966 RYR1P21817 5038 aa15.43■□□□□ 0.06
SMCO4-201ENST00000298966 A0A0J9YX75 114 aa15.43■□□□□ 0.06
SMCO4-201ENST00000298966 GATCO43716 136 aaKnown RBP15.43■□□□□ 0.06
SMCO4-201ENST00000298966 RAB5AP20339 215 aa15.43■□□□□ 0.06
SMCO4-201ENST00000298966 ERCC8Q13216 396 aa15.43■□□□□ 0.06
SMCO4-201ENST00000298966 PRR27Q6MZM9 219 aa15.43■□□□□ 0.06
SMCO4-201ENST00000298966 ZC2HC1AQ96GY0 325 aa15.43■□□□□ 0.06
SMCO4-201ENST00000298966 SELENOKQ9Y6D0 94 aa15.43■□□□□ 0.06
SMCO4-201ENST00000298966 P01737 135 aa15.42■□□□□ 0.06
SMCO4-201ENST00000298966 CRISP2P16562 243 aa15.42■□□□□ 0.06
SMCO4-201ENST00000298966 FAM162BQ5T6X4 162 aa15.42■□□□□ 0.06
SMCO4-201ENST00000298966 FAM19A4Q96LR4 140 aa15.42■□□□□ 0.06
SMCO4-201ENST00000298966 CLUHP3Q96NS8 147 aa15.42■□□□□ 0.06
SMCO4-201ENST00000298966 MAP6D1Q9H9H5 199 aa15.42■□□□□ 0.06
SMCO4-201ENST00000298966 TGIF2-C20orf24A0A0A6YYL0 155 aa15.41■□□□□ 0.06
SMCO4-201ENST00000298966 ZNF705GA8MUZ8 300 aaPredicted RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms