RNA–Protein interactions for RNA: ENST00000297792.9

KDM1B-201, Transcript of lysine demethylase 1B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene KDM1B, Length 3,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1B-201ENST00000297792 NOTCH3Q9UM47 2321 aa11.16□□□□□ -0.62
KDM1B-201ENST00000297792 CUBNO60494 3623 aa11.16□□□□□ -0.62
KDM1B-201ENST00000297792 WI2-2373I1.2A0A1W2PRP0 233 aa11.16□□□□□ -0.62
KDM1B-201ENST00000297792 OVOL3O00110 214 aa11.16□□□□□ -0.62
KDM1B-201ENST00000297792 MRPS12O15235 138 aaKnown RBP11.16□□□□□ -0.62
KDM1B-201ENST00000297792 MGPP08493 103 aa11.16□□□□□ -0.62
KDM1B-201ENST00000297792 HOXB4P17483 251 aaPredicted RBP11.16□□□□□ -0.62
KDM1B-201ENST00000297792 S100A4P26447 101 aaKnown RBP11.16□□□□□ -0.62
KDM1B-201ENST00000297792 GLMPQ8WWB7 406 aa11.16□□□□□ -0.62
KDM1B-201ENST00000297792 HIST1H4GQ99525 98 aa11.16□□□□□ -0.62
KDM1B-201ENST00000297792 CTSGP08311 255 aa11.15□□□□□ -0.62
KDM1B-201ENST00000297792 TMEM78Q5T7P6 136 aa11.15□□□□□ -0.62
KDM1B-201ENST00000297792 VMO1Q7Z5L0 202 aa11.15□□□□□ -0.62
KDM1B-201ENST00000297792 GTSF1LQ9H1H1 148 aa11.15□□□□□ -0.62
KDM1B-201ENST00000297792 IGLV11-55A0A075B6I3 123 aa11.15□□□□□ -0.62
KDM1B-201ENST00000297792 SMIM17P0DL12 118 aa11.15□□□□□ -0.62
KDM1B-201ENST00000297792 ZNF493Q6ZR52 646 aa11.15□□□□□ -0.62
KDM1B-201ENST00000297792 DOPEY2Q9Y3R5 2298 aa11.15□□□□□ -0.62
KDM1B-201ENST00000297792 CENPEQ02224 2701 aa11.15□□□□□ -0.63
KDM1B-201ENST00000297792 PDE6HQ13956 83 aa11.15□□□□□ -0.63
KDM1B-201ENST00000297792 SMAD5-AS1Q9Y6J3 95 aa11.15□□□□□ -0.63
KDM1B-201ENST00000297792 CRYBG3Q68DQ2 2970 aa11.14□□□□□ -0.63
KDM1B-201ENST00000297792 C16orf54Q6UWD8 224 aa11.14□□□□□ -0.63
KDM1B-201ENST00000297792 RPS20P60866 119 aaKnown RBP11.14□□□□□ -0.63
KDM1B-201ENST00000297792 PAX2Q02962 417 aa11.14□□□□□ -0.63
KDM1B-201ENST00000297792 ZNF562Q6V9R5 426 aa11.14□□□□□ -0.63
KDM1B-201ENST00000297792 TMEM219Q86XT9 240 aa11.14□□□□□ -0.63
KDM1B-201ENST00000297792 WFDC12Q8WWY7 111 aa11.14□□□□□ -0.63
KDM1B-201ENST00000297792 SMAGPQ0VAQ4 97 aa11.14□□□□□ -0.63
KDM1B-201ENST00000297792 ADAMTSL5Q6ZMM2 481 aa11.14□□□□□ -0.63
KDM1B-201ENST00000297792 TEX48A0A1B0GUV7 120 aa11.13□□□□□ -0.63
KDM1B-201ENST00000297792 DPM2O94777 84 aa11.13□□□□□ -0.63
KDM1B-201ENST00000297792 AGRNO00468 2067 aa11.13□□□□□ -0.63
KDM1B-201ENST00000297792 CSPG4Q6UVK1 2322 aa11.13□□□□□ -0.63
KDM1B-201ENST00000297792 EMP1P54849 157 aa11.13□□□□□ -0.63
KDM1B-201ENST00000297792 TRBV25-1A0A075B6N4 114 aa11.13□□□□□ -0.63
KDM1B-201ENST00000297792 ODF1Q14990 250 aa11.13□□□□□ -0.63
KDM1B-201ENST00000297792 C16orf92Q96LL3 132 aa11.13□□□□□ -0.63
KDM1B-201ENST00000297792 SORL1Q92673 2214 aa11.13□□□□□ -0.63
KDM1B-201ENST00000297792 F8W735 103 aaPredicted RBP11.12□□□□□ -0.63
KDM1B-201ENST00000297792 RNF185Q96GF1 192 aa11.12□□□□□ -0.63
KDM1B-201ENST00000297792 LINC01548A6NM66 108 aa11.12□□□□□ -0.63
KDM1B-201ENST00000297792 TGFAP01135 160 aa11.12□□□□□ -0.63
KDM1B-201ENST00000297792 H3BMG7 143 aa11.11□□□□□ -0.63
KDM1B-201ENST00000297792 LY6LH3BQJ8 138 aa11.11□□□□□ -0.63
KDM1B-201ENST00000297792 ATP6V0E1O15342 81 aa11.11□□□□□ -0.63
KDM1B-201ENST00000297792 ARL3P36405 182 aa11.11□□□□□ -0.63
KDM1B-201ENST00000297792 AGPAT4-IT1Q9H0P7 198 aa11.11□□□□□ -0.63
KDM1B-201ENST00000297792 NXT2Q9NPJ8 142 aaKnown RBP11.11□□□□□ -0.63
KDM1B-201ENST00000297792 NEGR1Q7Z3B1 354 aa11.11□□□□□ -0.63
KDM1B-201ENST00000297792 RNF5Q99942 180 aa11.11□□□□□ -0.63
KDM1B-201ENST00000297792 NPFFR1Q9GZQ6 430 aa11.11□□□□□ -0.63
KDM1B-201ENST00000297792 CYSLTR1Q9Y271 337 aa11.11□□□□□ -0.63
KDM1B-201ENST00000297792 CELSR2Q9HCU4 2923 aa11.1□□□□□ -0.63
KDM1B-201ENST00000297792 CCDC144NLQ6NUI1 221 aa11.1□□□□□ -0.63
KDM1B-201ENST00000297792 SH2D6Q7Z4S9 175 aa11.1□□□□□ -0.63
KDM1B-201ENST00000297792 ZNF502Q8TBZ5 544 aa11.1□□□□□ -0.63
KDM1B-201ENST00000297792 UBTD1Q9HAC8 227 aa11.1□□□□□ -0.63
KDM1B-201ENST00000297792 C11orf21Q9P2W6 132 aa11.1□□□□□ -0.63
KDM1B-201ENST00000297792 ETDBQ3ZM63 59 aa11.1□□□□□ -0.63
KDM1B-201ENST00000297792 SCGB1D4Q6XE38 83 aa11.1□□□□□ -0.63
KDM1B-201ENST00000297792 IGHV7-81A0A0B4J1V7 117 aa11.1□□□□□ -0.63
KDM1B-201ENST00000297792 IGKV3D-20A0A0C4DH25 116 aa11.1□□□□□ -0.63
KDM1B-201ENST00000297792 TRBV6-1A0A0K0K1D8 114 aa11.1□□□□□ -0.63
KDM1B-201ENST00000297792 IGF1P05019 195 aa11.1□□□□□ -0.63
KDM1B-201ENST00000297792 SRD5A1P18405 259 aa11.1□□□□□ -0.63
KDM1B-201ENST00000297792 UFSP1Q6NVU6 142 aa11.1□□□□□ -0.63
KDM1B-201ENST00000297792 MAPKAPK5-AS1Q8N8E1 139 aa11.1□□□□□ -0.63
KDM1B-201ENST00000297792 ZNF479Q96JC4 524 aa11.1□□□□□ -0.63
KDM1B-201ENST00000297792 IGLC6P0CF74 106 aa11.09□□□□□ -0.63
KDM1B-201ENST00000297792 IGF2-ASQ6U949 168 aa11.09□□□□□ -0.63
KDM1B-201ENST00000297792 U3KQK5 164 aa11.09□□□□□ -0.63
KDM1B-201ENST00000297792 TMEM238C9JI98 176 aa11.09□□□□□ -0.63
KDM1B-201ENST00000297792 IGHV3-11P01762 117 aa11.09□□□□□ -0.63
KDM1B-201ENST00000297792 WFDC2Q14508 124 aa11.09□□□□□ -0.63
KDM1B-201ENST00000297792 C14orf178Q8N769 122 aaPredicted RBP11.09□□□□□ -0.63
KDM1B-201ENST00000297792 VKORC1Q9BQB6 163 aa11.09□□□□□ -0.63
KDM1B-201ENST00000297792 IGHG4P01861 327 aa11.08□□□□□ -0.64
KDM1B-201ENST00000297792 PRTN3P24158 256 aa11.08□□□□□ -0.64
KDM1B-201ENST00000297792 LAGE3Q14657 143 aa11.08□□□□□ -0.64
KDM1B-201ENST00000297792 OR5A1Q8NGJ0 315 aa11.08□□□□□ -0.64
KDM1B-201ENST00000297792 METTL26Q96S19 204 aa11.08□□□□□ -0.64
KDM1B-201ENST00000297792 UTP20O75691 2785 aaKnown RBP11.08□□□□□ -0.64
KDM1B-201ENST00000297792 CSMD2Q7Z408 3487 aa11.08□□□□□ -0.64
KDM1B-201ENST00000297792 LOC107984156A0A0G2JMH3 177 aa11.08□□□□□ -0.64
KDM1B-201ENST00000297792 ARL17AQ8IVW1 177 aa11.08□□□□□ -0.64
KDM1B-201ENST00000297792 SCGB3A1Q96QR1 104 aa11.08□□□□□ -0.64
KDM1B-201ENST00000297792 G3V4G9 280 aa11.07□□□□□ -0.64
KDM1B-201ENST00000297792 ZFP36P26651 326 aaKnown RBP11.07□□□□□ -0.64
KDM1B-201ENST00000297792 TTC9CQ8N5M4 171 aa11.07□□□□□ -0.64
KDM1B-201ENST00000297792 SRSF8Q9BRL6 282 aaKnown RBP11.07□□□□□ -0.64
KDM1B-201ENST00000297792 OR11H12B2RN74 326 aa11.07□□□□□ -0.64
KDM1B-201ENST00000297792 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.07□□□□□ -0.64
KDM1B-201ENST00000297792 SRSF9Q13242 221 aaKnown RBP eCLIP11.07□□□□□ -0.64
KDM1B-201ENST00000297792 SAMD13Q5VXD3 122 aa11.07□□□□□ -0.64
KDM1B-201ENST00000297792 OR11H1Q8NG94 326 aa11.07□□□□□ -0.64
KDM1B-201ENST00000297792 OR11H6Q8NGC7 330 aa11.07□□□□□ -0.64
KDM1B-201ENST00000297792 OR11H2Q8NH07 326 aa11.07□□□□□ -0.64
KDM1B-201ENST00000297792 HHLA3Q9XRX5 114 aa11.07□□□□□ -0.64
KDM1B-201ENST00000297792 F6UB75 175 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms