RNA–Protein interactions for RNA: ENST00000295688.7

CCT3-201, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT3, Length 2,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-201ENST00000295688 ATP6V0BQ99437 205 aa11.41□□□□□ -0.58
CCT3-201ENST00000295688 TTC28Q96AY4 2481 aa11.41□□□□□ -0.58
CCT3-201ENST00000295688 SMG1Q96Q15 3661 aaKnown RBP11.4□□□□□ -0.58
CCT3-201ENST00000295688 CLPSL1A2RUU4 121 aa11.4□□□□□ -0.58
CCT3-201ENST00000295688 RIPPLY3P57055 190 aa11.4□□□□□ -0.58
CCT3-201ENST00000295688 TAL2Q16559 108 aa11.4□□□□□ -0.58
CCT3-201ENST00000295688 ZC2HC1BQ5TFG8 222 aa11.4□□□□□ -0.58
CCT3-201ENST00000295688 CLEC19AQ6UXS0 136 aa11.4□□□□□ -0.58
CCT3-201ENST00000295688 LENEPQ9Y5L5 61 aa11.4□□□□□ -0.58
CCT3-201ENST00000295688 IGKV2D-26A0A0A0MRZ7 120 aa11.4□□□□□ -0.59
CCT3-201ENST00000295688 TMEM8BA6NDV4 472 aa11.4□□□□□ -0.59
CCT3-201ENST00000295688 ATP6V0E1O15342 81 aa11.4□□□□□ -0.59
CCT3-201ENST00000295688 GATA1P15976 413 aaPredicted RBP11.4□□□□□ -0.59
CCT3-201ENST00000295688 TM2D2Q9BX73 214 aa11.4□□□□□ -0.59
CCT3-201ENST00000295688 ASPMQ8IZT6 3477 aa11.4□□□□□ -0.59
CCT3-201ENST00000295688 ZNF292O60281 2723 aa11.39□□□□□ -0.59
CCT3-201ENST00000295688 ZZEF1O43149 2961 aa11.39□□□□□ -0.59
CCT3-201ENST00000295688 TRBV25-1A0A075B6N4 114 aa11.39□□□□□ -0.59
CCT3-201ENST00000295688 ZFP36P26651 326 aaKnown RBP11.39□□□□□ -0.59
CCT3-201ENST00000295688 GTSCR1Q86UQ5 136 aa11.39□□□□□ -0.59
CCT3-201ENST00000295688 NRACQ8N912 160 aa11.39□□□□□ -0.59
CCT3-201ENST00000295688 MRAP2Q96G30 205 aa11.39□□□□□ -0.59
CCT3-201ENST00000295688 C11orf21Q9P2W6 132 aa11.39□□□□□ -0.59
CCT3-201ENST00000295688 CHTOPQ9Y3Y2 248 aaKnown RBP11.39□□□□□ -0.59
CCT3-201ENST00000295688 AKAP13Q12802 2813 aa11.39□□□□□ -0.59
CCT3-201ENST00000295688 TRAV8-2A0A0B4J237 113 aa11.38□□□□□ -0.59
CCT3-201ENST00000295688 IGHV7-4-1A0A0J9YVY3 117 aa11.38□□□□□ -0.59
CCT3-201ENST00000295688 SPANXN1Q5VSR9 72 aa11.38□□□□□ -0.59
CCT3-201ENST00000295688 C8orf86Q6ZUL3 223 aa11.38□□□□□ -0.59
CCT3-201ENST00000295688 CCDC140Q96MF4 163 aa11.38□□□□□ -0.59
CCT3-201ENST00000295688 NAA38Q9BRA0 125 aaKnown RBP11.38□□□□□ -0.59
CCT3-201ENST00000295688 U3KQE9 123 aa11.38□□□□□ -0.59
CCT3-201ENST00000295688 ANKHD1Q8IWZ3 2542 aaKnown RBP11.38□□□□□ -0.59
CCT3-201ENST00000295688 A0A087WX48 190 aa11.38□□□□□ -0.59
CCT3-201ENST00000295688 PLNP26678 52 aa11.38□□□□□ -0.59
CCT3-201ENST00000295688 FXYD2P54710 66 aa11.38□□□□□ -0.59
CCT3-201ENST00000295688 FOXC1Q12948 553 aa11.38□□□□□ -0.59
CCT3-201ENST00000295688 CEND1Q8N111 149 aa11.38□□□□□ -0.59
CCT3-201ENST00000295688 TMEM160Q9NX00 188 aa11.38□□□□□ -0.59
CCT3-201ENST00000295688 TRGV3P03979 118 aa11.37□□□□□ -0.59
CCT3-201ENST00000295688 ADORA2A-AS1P86434 159 aa11.37□□□□□ -0.59
CCT3-201ENST00000295688 UFC1Q9Y3C8 167 aa11.37□□□□□ -0.59
CCT3-201ENST00000295688 IGHV3-66A0A0C4DH42 116 aa11.37□□□□□ -0.59
CCT3-201ENST00000295688 MRPL35Q9NZE8 188 aaKnown RBP11.37□□□□□ -0.59
CCT3-201ENST00000295688 TRAV12-1A0A0B4J245 112 aa11.36□□□□□ -0.59
CCT3-201ENST00000295688 TRAV40A0A0B4J280 105 aa11.36□□□□□ -0.59
CCT3-201ENST00000295688 K7EMI3 77 aa11.36□□□□□ -0.59
CCT3-201ENST00000295688 SCGB1A1P11684 91 aa11.36□□□□□ -0.59
CCT3-201ENST00000295688 ATP5G2Q06055 141 aa11.36□□□□□ -0.59
CCT3-201ENST00000295688 C9orf139Q6ZV77 190 aa11.36□□□□□ -0.59
CCT3-201ENST00000295688 DMXL1Q9Y485 3027 aa11.36□□□□□ -0.59
CCT3-201ENST00000295688 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.35□□□□□ -0.59
CCT3-201ENST00000295688 ORMDL2Q53FV1 153 aa11.35□□□□□ -0.59
CCT3-201ENST00000295688 TM4SF20Q53R12 229 aa11.35□□□□□ -0.59
CCT3-201ENST00000295688 C16orf92Q96LL3 132 aa11.35□□□□□ -0.59
CCT3-201ENST00000295688 LINC00477Q96M19 166 aa11.35□□□□□ -0.59
CCT3-201ENST00000295688 CENPVL3A0A0U1RRI6 287 aa11.35□□□□□ -0.59
CCT3-201ENST00000295688 AJUBAQ96IF1 538 aa11.35□□□□□ -0.59
CCT3-201ENST00000295688 PIEZO2Q9H5I5 2752 aa11.35□□□□□ -0.59
CCT3-201ENST00000295688 ABCA4P78363 2273 aa11.34□□□□□ -0.59
CCT3-201ENST00000295688 E9PLD3 99 aa11.34□□□□□ -0.59
CCT3-201ENST00000295688 H7C1H1 209 aa11.34□□□□□ -0.59
CCT3-201ENST00000295688 SLC25A16P16260 332 aa11.34□□□□□ -0.59
CCT3-201ENST00000295688 SAA4P35542 130 aa11.34□□□□□ -0.59
CCT3-201ENST00000295688 KLRB1Q12918 225 aa11.34□□□□□ -0.59
CCT3-201ENST00000295688 BSNQ9UPA5 3926 aa11.34□□□□□ -0.59
CCT3-201ENST00000295688 IGHV3OR16-13A0A075B7E8 117 aa11.34□□□□□ -0.59
CCT3-201ENST00000295688 IGHV3-74A0A0B4J1X5 117 aa11.34□□□□□ -0.59
CCT3-201ENST00000295688 FAM223BA6NKX1 122 aa11.34□□□□□ -0.59
CCT3-201ENST00000295688 LINC01619G3V211 115 aa11.34□□□□□ -0.59
CCT3-201ENST00000295688 G3V318 75 aa11.34□□□□□ -0.59
CCT3-201ENST00000295688 FAM223AQ8IWN6 122 aa11.34□□□□□ -0.59
CCT3-201ENST00000295688 SMIM2Q9BVW6 85 aa11.34□□□□□ -0.59
CCT3-201ENST00000295688 RIF1Q5UIP0 2472 aaKnown RBP11.33□□□□□ -0.6
CCT3-201ENST00000295688 CIDEAO60543 219 aa11.33□□□□□ -0.6
CCT3-201ENST00000295688 CDSNQ15517 529 aa11.33□□□□□ -0.6
CCT3-201ENST00000295688 FOXI2Q6ZQN5 318 aa11.33□□□□□ -0.6
CCT3-201ENST00000295688 C20orf78Q9BR46 151 aa11.33□□□□□ -0.6
CCT3-201ENST00000295688 TTTY13Q9BZ97 58 aa11.33□□□□□ -0.6
CCT3-201ENST00000295688 NHP2Q9NX24 153 aaKnown RBP11.33□□□□□ -0.6
CCT3-201ENST00000295688 ADGRG4Q8IZF6 3080 aa11.33□□□□□ -0.6
CCT3-201ENST00000295688 F8VRH5 84 aa11.33□□□□□ -0.6
CCT3-201ENST00000295688 OVOL1O14753 267 aa11.33□□□□□ -0.6
CCT3-201ENST00000295688 KALRNO60229 2985 aa11.33□□□□□ -0.6
CCT3-201ENST00000295688 TRAV26-2A0A0B4J265 109 aa11.32□□□□□ -0.6
CCT3-201ENST00000295688 TRAV21A0A0B4J279 112 aa11.32□□□□□ -0.6
CCT3-201ENST00000295688 H3BVH4 76 aa11.32□□□□□ -0.6
CCT3-201ENST00000295688 NPFFO15130 113 aa11.32□□□□□ -0.6
CCT3-201ENST00000295688 ZNF207O43670 478 aaKnown RBP11.32□□□□□ -0.6
CCT3-201ENST00000295688 UCNP55089 124 aa11.32□□□□□ -0.6
CCT3-201ENST00000295688 C5orf56Q8N8D9 126 aa11.32□□□□□ -0.6
CCT3-201ENST00000295688 GLMPQ8WWB7 406 aa11.32□□□□□ -0.6
CCT3-201ENST00000295688 GVINP1Q7Z2Y8 2422 aa11.32□□□□□ -0.6
CCT3-201ENST00000295688 IGHV3-49A0A0A0MS15 119 aa11.31□□□□□ -0.6
CCT3-201ENST00000295688 TEX48A0A1B0GUV7 120 aa11.31□□□□□ -0.6
CCT3-201ENST00000295688 PPP1R17O96001 155 aa11.31□□□□□ -0.6
CCT3-201ENST00000295688 MED14OSP0DP75 135 aa11.31□□□□□ -0.6
CCT3-201ENST00000295688 OR10J6PQ8NGY7 276 aa11.31□□□□□ -0.6
CCT3-201ENST00000295688 ITLN2Q8WWU7 325 aaPredicted RBP11.31□□□□□ -0.6
CCT3-201ENST00000295688 DMXL2Q8TDJ6 3036 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms