RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 TRBV19A0A075B6N1 114 aa12.87□□□□□ -0.35
SSRP1-202ENST00000293880 J3KT08 172 aa12.87□□□□□ -0.35
SSRP1-202ENST00000293880 RNF166Q96A37 237 aaPredicted RBP12.87□□□□□ -0.35
SSRP1-202ENST00000293880 TAL2Q16559 108 aa12.87□□□□□ -0.35
SSRP1-202ENST00000293880 TRAV26-1A0A087WT03 109 aa12.87□□□□□ -0.35
SSRP1-202ENST00000293880 CT83Q5H943 113 aa12.87□□□□□ -0.35
SSRP1-202ENST00000293880 NCOR1O75376 2440 aa12.87□□□□□ -0.35
SSRP1-202ENST00000293880 C14orf132Q9NPU4 83 aa12.87□□□□□ -0.35
SSRP1-202ENST00000293880 NDUFA12Q9UI09 145 aa12.86□□□□□ -0.35
SSRP1-202ENST00000293880 IGF2BP2-AS1Q96M15 143 aa12.86□□□□□ -0.35
SSRP1-202ENST00000293880 TMEM14BQ9NUH8 114 aa12.86□□□□□ -0.35
SSRP1-202ENST00000293880 K7EN84 100 aa12.86□□□□□ -0.35
SSRP1-202ENST00000293880 FAM110DQ8TAY7 271 aaPredicted RBP12.86□□□□□ -0.35
SSRP1-202ENST00000293880 Q6ZQT7 251 aa12.86□□□□□ -0.35
SSRP1-202ENST00000293880 NDUFA4L2Q9NRX3 87 aa12.86□□□□□ -0.35
SSRP1-202ENST00000293880 GREB1LQ9C091 1923 aaPredicted RBP12.85□□□□□ -0.35
SSRP1-202ENST00000293880 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.85□□□□□ -0.35
SSRP1-202ENST00000293880 IGKV2-29A2NJV5 120 aaPredicted RBP12.85□□□□□ -0.35
SSRP1-202ENST00000293880 CACNA1BQ00975 2339 aa12.85□□□□□ -0.35
SSRP1-202ENST00000293880 BAALC-AS2P0C853 105 aa12.85□□□□□ -0.35
SSRP1-202ENST00000293880 IGHV1OR15-1A0A075B7D0 117 aa12.85□□□□□ -0.35
SSRP1-202ENST00000293880 A0A0J9YY99 117 aa12.85□□□□□ -0.35
SSRP1-202ENST00000293880 TCF20Q9UGU0 1960 aaKnown RBP12.85□□□□□ -0.35
SSRP1-202ENST00000293880 C17orf58Q2M2W7 97 aa12.85□□□□□ -0.35
SSRP1-202ENST00000293880 FHL1Q13642 323 aa12.84□□□□□ -0.35
SSRP1-202ENST00000293880 CGB7P0DN87 165 aa12.84□□□□□ -0.35
SSRP1-202ENST00000293880 ZNF503-AS2A6NEH8 195 aa12.84□□□□□ -0.35
SSRP1-202ENST00000293880 WDR86Q86TI4 376 aa12.84□□□□□ -0.35
SSRP1-202ENST00000293880 Q8NFD4 153 aa12.84□□□□□ -0.35
SSRP1-202ENST00000293880 U3KQE9 123 aa12.84□□□□□ -0.35
SSRP1-202ENST00000293880 RIF1Q5UIP0 2472 aaKnown RBP12.84□□□□□ -0.35
SSRP1-202ENST00000293880 KLF5Q13887 457 aaPredicted RBP12.84□□□□□ -0.35
SSRP1-202ENST00000293880 H3BRN7 92 aa12.84□□□□□ -0.35
SSRP1-202ENST00000293880 GNRH2O43555 120 aa12.84□□□□□ -0.35
SSRP1-202ENST00000293880 ZNF833PQ6ZTB9 187 aa12.84□□□□□ -0.35
SSRP1-202ENST00000293880 XCL1P47992 114 aa12.83□□□□□ -0.36
SSRP1-202ENST00000293880 Q96MF0 132 aa12.83□□□□□ -0.36
SSRP1-202ENST00000293880 HERV-K104P63124 156 aa12.83□□□□□ -0.36
SSRP1-202ENST00000293880 F6UB75 175 aa12.83□□□□□ -0.36
SSRP1-202ENST00000293880 IGLV2-23P01705 113 aa12.83□□□□□ -0.36
SSRP1-202ENST00000293880 PTPRDP23468 1912 aa12.83□□□□□ -0.36
SSRP1-202ENST00000293880 OOSP1A8MZH6 123 aa12.82□□□□□ -0.36
SSRP1-202ENST00000293880 NDUFS7O75251 213 aa12.82□□□□□ -0.36
SSRP1-202ENST00000293880 PCP2Q8IVA1 136 aa12.82□□□□□ -0.36
SSRP1-202ENST00000293880 CFHR4Q92496 578 aa12.82□□□□□ -0.36
SSRP1-202ENST00000293880 ANGP03950 147 aaKnown RBP12.81□□□□□ -0.36
SSRP1-202ENST00000293880 PDE6HQ13956 83 aa12.81□□□□□ -0.36
SSRP1-202ENST00000293880 C8orf31Q8N9H6 132 aa12.81□□□□□ -0.36
SSRP1-202ENST00000293880 IGLC7A0M8Q6 106 aa12.81□□□□□ -0.36
SSRP1-202ENST00000293880 INTS1Q8N201 2190 aaKnown RBP12.8□□□□□ -0.36
SSRP1-202ENST00000293880 LHBP01229 141 aa12.8□□□□□ -0.36
SSRP1-202ENST00000293880 PRR25Q96S07 402 aa12.8□□□□□ -0.36
SSRP1-202ENST00000293880 SRSF2Q01130 221 aaKnown RBP12.8□□□□□ -0.36
SSRP1-202ENST00000293880 ACYP1P07311 99 aa12.8□□□□□ -0.36
SSRP1-202ENST00000293880 FOXE3Q13461 319 aa12.8□□□□□ -0.36
SSRP1-202ENST00000293880 GATA1P15976 413 aaPredicted RBP12.8□□□□□ -0.36
SSRP1-202ENST00000293880 POU2AF1Q16633 256 aa12.8□□□□□ -0.36
SSRP1-202ENST00000293880 COL6A6A6NMZ7 2263 aa12.8□□□□□ -0.36
SSRP1-202ENST00000293880 LGALS9BQ3B8N2 356 aa12.79□□□□□ -0.36
SSRP1-202ENST00000293880 LGALS9CQ6DKI2 356 aa12.79□□□□□ -0.36
SSRP1-202ENST00000293880 MRPL55Q7Z7F7 128 aaKnown RBP12.79□□□□□ -0.36
SSRP1-202ENST00000293880 Q6ZR03 302 aa12.79□□□□□ -0.36
SSRP1-202ENST00000293880 FXYD5Q96DB9 178 aa12.79□□□□□ -0.36
SSRP1-202ENST00000293880 SDK2Q58EX2 2172 aa12.79□□□□□ -0.36
SSRP1-202ENST00000293880 IGKV1OR2-108A0A075B7D4 117 aa12.79□□□□□ -0.36
SSRP1-202ENST00000293880 ZNF134P52741 427 aa12.79□□□□□ -0.36
SSRP1-202ENST00000293880 Q6ZS49 121 aa12.79□□□□□ -0.36
SSRP1-202ENST00000293880 NOP10Q9NPE3 64 aaKnown RBP12.79□□□□□ -0.36
SSRP1-202ENST00000293880 J3QQQ9 107 aa12.79□□□□□ -0.36
SSRP1-202ENST00000293880 RPL18AQ02543 176 aaKnown RBP12.79□□□□□ -0.36
SSRP1-202ENST00000293880 MSMBP08118 114 aa12.78□□□□□ -0.36
SSRP1-202ENST00000293880 WFDC2Q14508 124 aa12.78□□□□□ -0.36
SSRP1-202ENST00000293880 RHODO00212 210 aa12.78□□□□□ -0.36
SSRP1-202ENST00000293880 IGHV2-5P01817 119 aa12.78□□□□□ -0.36
SSRP1-202ENST00000293880 PI4KAP42356 2102 aa12.78□□□□□ -0.36
SSRP1-202ENST00000293880 PSMB8P28062 276 aa12.78□□□□□ -0.36
SSRP1-202ENST00000293880 DOCK11Q5JSL3 2073 aa12.78□□□□□ -0.36
SSRP1-202ENST00000293880 ACACAQ13085 2346 aa12.78□□□□□ -0.36
SSRP1-202ENST00000293880 IGHV1-69DA0A0B4J2H0 117 aa12.78□□□□□ -0.36
SSRP1-202ENST00000293880 IGHV1-69P01742 117 aa12.78□□□□□ -0.36
SSRP1-202ENST00000293880 SP5Q6BEB4 398 aaPredicted RBP12.77□□□□□ -0.36
SSRP1-202ENST00000293880 SBF1O95248 1867 aa12.77□□□□□ -0.37
SSRP1-202ENST00000293880 MLST8Q9BVC4 326 aa12.77□□□□□ -0.37
SSRP1-202ENST00000293880 WT1-ASQ06250 92 aa12.77□□□□□ -0.37
SSRP1-202ENST00000293880 RNF183Q96D59 192 aa12.77□□□□□ -0.37
SSRP1-202ENST00000293880 UBE2E1P51965 193 aa12.76□□□□□ -0.37
SSRP1-202ENST00000293880 SMIM2Q9BVW6 85 aa12.76□□□□□ -0.37
SSRP1-202ENST00000293880 FOXL2NBQ6ZUU3 175 aa12.76□□□□□ -0.37
SSRP1-202ENST00000293880 DYNAPQ8N1N2 210 aa12.76□□□□□ -0.37
SSRP1-202ENST00000293880 VOPP1Q96AW1 172 aa12.76□□□□□ -0.37
SSRP1-202ENST00000293880 KMT2EQ8IZD2 1858 aa12.76□□□□□ -0.37
SSRP1-202ENST00000293880 TRAV13-2A0A0B4J235 113 aa12.76□□□□□ -0.37
SSRP1-202ENST00000293880 YPEL3P61236 119 aaPredicted RBP12.76□□□□□ -0.37
SSRP1-202ENST00000293880 LYPD6Q86Y78 171 aa12.76□□□□□ -0.37
SSRP1-202ENST00000293880 Q9HAA7 133 aa12.76□□□□□ -0.37
SSRP1-202ENST00000293880 RNF114Q9Y508 228 aa12.76□□□□□ -0.37
SSRP1-202ENST00000293880 YLPM1P49750 1951 aaKnown RBP12.76□□□□□ -0.37
SSRP1-202ENST00000293880 CFC1BP0CG36 223 aa12.76□□□□□ -0.37
SSRP1-202ENST00000293880 CFC1P0CG37 223 aa12.76□□□□□ -0.37
SSRP1-202ENST00000293880 MUSTN1Q8IVN3 82 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms