RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 MPC2O95563 127 aa17.35■□□□□ 0.37
U2AF1-201ENST00000291552 ST6GAL2Q96JF0 529 aa17.35■□□□□ 0.37
U2AF1-201ENST00000291552 TRBV7-9A0A0J9YWB2 115 aa17.34■□□□□ 0.37
U2AF1-201ENST00000291552 A0A1W2PPQ1 181 aa17.34■□□□□ 0.37
U2AF1-201ENST00000291552 EIF3GO75821 320 aaKnown RBP eCLIP17.34■□□□□ 0.37
U2AF1-201ENST00000291552 UBE2L3P68036 154 aaKnown RBP17.34■□□□□ 0.37
U2AF1-201ENST00000291552 FFAR4Q5NUL3 377 aa17.34■□□□□ 0.37
U2AF1-201ENST00000291552 IGHV3-53P01767 116 aa17.33■□□□□ 0.36
U2AF1-201ENST00000291552 RANP62826 216 aaKnown RBP17.33■□□□□ 0.36
U2AF1-201ENST00000291552 SMIM3Q9BZL3 60 aa17.33■□□□□ 0.36
U2AF1-201ENST00000291552 RBAKDNA6NC62 111 aa17.32■□□□□ 0.36
U2AF1-201ENST00000291552 ZNF266Q14584 549 aa17.32■□□□□ 0.36
U2AF1-201ENST00000291552 SPATA12Q7Z6I5 190 aa17.32■□□□□ 0.36
U2AF1-201ENST00000291552 ARPC5LQ9BPX5 153 aa17.32■□□□□ 0.36
U2AF1-201ENST00000291552 WFDC1Q9HC57 220 aa17.32■□□□□ 0.36
U2AF1-201ENST00000291552 CDK2AP2O75956 126 aa17.31■□□□□ 0.36
U2AF1-201ENST00000291552 MUC21Q5SSG8 566 aa17.31■□□□□ 0.36
U2AF1-201ENST00000291552 LYPD1Q8N2G4 141 aa17.31■□□□□ 0.36
U2AF1-201ENST00000291552 MBD2Q9UBB5 411 aa17.31■□□□□ 0.36
U2AF1-201ENST00000291552 PAX4O43316 350 aa17.3■□□□□ 0.36
U2AF1-201ENST00000291552 SSNA1O43805 119 aa17.3■□□□□ 0.36
U2AF1-201ENST00000291552 RPL12P30050 165 aaKnown RBP17.3■□□□□ 0.36
U2AF1-201ENST00000291552 MDFICQ9P1T7 246 aa17.3■□□□□ 0.36
U2AF1-201ENST00000291552 DIRC3C9JPN6 131 aa17.29■□□□□ 0.36
U2AF1-201ENST00000291552 CSN1S1P47710 185 aa17.29■□□□□ 0.36
U2AF1-201ENST00000291552 KRTAP10-2P60368 255 aa17.29■□□□□ 0.36
U2AF1-201ENST00000291552 ZNF415Q09FC8 603 aa17.29■□□□□ 0.36
U2AF1-201ENST00000291552 FHL2Q14192 279 aa17.29■□□□□ 0.36
U2AF1-201ENST00000291552 KHDC3LQ587J8 217 aa17.29■□□□□ 0.36
U2AF1-201ENST00000291552 ICOSQ9Y6W8 199 aa17.29■□□□□ 0.36
U2AF1-201ENST00000291552 PET100P0DJ07 73 aa17.28■□□□□ 0.36
U2AF1-201ENST00000291552 BTF3P20290 206 aaKnown RBP17.28■□□□□ 0.36
U2AF1-201ENST00000291552 CRYBA4P53673 196 aa17.28■□□□□ 0.36
U2AF1-201ENST00000291552 LINC00315P59091 139 aa17.28■□□□□ 0.36
U2AF1-201ENST00000291552 Q6AWC8 147 aa17.28■□□□□ 0.36
U2AF1-201ENST00000291552 Q6ZRN7 208 aaPredicted RBP17.28■□□□□ 0.36
U2AF1-201ENST00000291552 C8orf49Q96NF6 230 aa17.28■□□□□ 0.36
U2AF1-201ENST00000291552 PRO0255Q9UI72 69 aa17.27■□□□□ 0.36
U2AF1-201ENST00000291552 NXPH4O95158 308 aa17.26■□□□□ 0.35
U2AF1-201ENST00000291552 IFNA5P01569 189 aa17.26■□□□□ 0.35
U2AF1-201ENST00000291552 SCGB1C1Q8TD33 95 aa17.26■□□□□ 0.35
U2AF1-201ENST00000291552 LENEPQ9Y5L5 61 aa17.26■□□□□ 0.35
U2AF1-201ENST00000291552 SIVA1O15304 175 aa17.25■□□□□ 0.35
U2AF1-201ENST00000291552 TAS2R45P59539 299 aa17.25■□□□□ 0.35
U2AF1-201ENST00000291552 TMEM183BQ1AE95 376 aa17.25■□□□□ 0.35
U2AF1-201ENST00000291552 TMEM183AQ8IXX5 376 aa17.25■□□□□ 0.35
U2AF1-201ENST00000291552 OTORQ9NRC9 128 aa17.25■□□□□ 0.35
U2AF1-201ENST00000291552 HHLA3Q9XRX5 114 aa17.25■□□□□ 0.35
U2AF1-201ENST00000291552 SFTA3P0C7M3 94 aa17.24■□□□□ 0.35
U2AF1-201ENST00000291552 RAB2AP61019 212 aa17.24■□□□□ 0.35
U2AF1-201ENST00000291552 ZNF479Q96JC4 524 aa17.24■□□□□ 0.35
U2AF1-201ENST00000291552 HYLS1Q96M11 299 aa17.24■□□□□ 0.35
U2AF1-201ENST00000291552 DEFA1P59665 94 aa17.23■□□□□ 0.35
U2AF1-201ENST00000291552 DEFA3P59666 94 aa17.23■□□□□ 0.35
U2AF1-201ENST00000291552 TMED6Q8WW62 240 aa17.23■□□□□ 0.35
U2AF1-201ENST00000291552 RPH3ALQ9UNE2 315 aa17.23■□□□□ 0.35
U2AF1-201ENST00000291552 PGPA6NDG6 321 aa17.22■□□□□ 0.35
U2AF1-201ENST00000291552 SLAQ13239 276 aa17.22■□□□□ 0.35
U2AF1-201ENST00000291552 LYPD5Q6UWN5 251 aa17.22■□□□□ 0.35
U2AF1-201ENST00000291552 OR10G4Q8NGN3 311 aa17.22■□□□□ 0.35
U2AF1-201ENST00000291552 RASL10AQ92737 203 aa17.22■□□□□ 0.35
U2AF1-201ENST00000291552 TVP23CQ96ET8 276 aa17.22■□□□□ 0.35
U2AF1-201ENST00000291552 GOLT1AQ6ZVE7 132 aa17.21■□□□□ 0.35
U2AF1-201ENST00000291552 MAPKAPK5-AS1Q8N8E1 139 aa17.21■□□□□ 0.35
U2AF1-201ENST00000291552 TRGV11A0A075B6L2 103 aa17.2■□□□□ 0.34
U2AF1-201ENST00000291552 MRPL23Q16540 153 aaKnown RBP17.2■□□□□ 0.34
U2AF1-201ENST00000291552 ACOT6Q3I5F7 207 aaPredicted RBP17.2■□□□□ 0.34
U2AF1-201ENST00000291552 TDRG1Q3Y452 100 aa17.2■□□□□ 0.34
U2AF1-201ENST00000291552 SPXQ9BT56 116 aa17.2■□□□□ 0.34
U2AF1-201ENST00000291552 TRAV8-1A0A0A6YYK1 113 aa17.19■□□□□ 0.34
U2AF1-201ENST00000291552 HMGB3O15347 200 aaKnown RBP17.19■□□□□ 0.34
U2AF1-201ENST00000291552 GNG5P63218 68 aa17.19■□□□□ 0.34
U2AF1-201ENST00000291552 FAM159AQ6UWV7 190 aa17.19■□□□□ 0.34
U2AF1-201ENST00000291552 PQLC2Q6ZP29 291 aa17.19■□□□□ 0.34
U2AF1-201ENST00000291552 IQCF2Q8IXL9 164 aa17.19■□□□□ 0.34
U2AF1-201ENST00000291552 NAGKQ9UJ70 344 aa17.19■□□□□ 0.34
U2AF1-201ENST00000291552 TNFRSF18Q9Y5U5 241 aa17.19■□□□□ 0.34
U2AF1-201ENST00000291552 TRGV4A0A0C4DH28 118 aa17.18■□□□□ 0.34
U2AF1-201ENST00000291552 F6UZH7 168 aa17.18■□□□□ 0.34
U2AF1-201ENST00000291552 K7EQD1 137 aa17.18■□□□□ 0.34
U2AF1-201ENST00000291552 NEGR1Q7Z3B1 354 aa17.18■□□□□ 0.34
U2AF1-201ENST00000291552 CMTM2Q8TAZ6 248 aa17.18■□□□□ 0.34
U2AF1-201ENST00000291552 ALG5Q9Y673 324 aa17.18■□□□□ 0.34
U2AF1-201ENST00000291552 IGHV3-16A0A0C4DH30 117 aa17.17■□□□□ 0.34
U2AF1-201ENST00000291552 GNRH2O43555 120 aa17.17■□□□□ 0.34
U2AF1-201ENST00000291552 A0A1W2PPV4 95 aa17.16■□□□□ 0.34
U2AF1-201ENST00000291552 ARL6IP6Q8N6S5 226 aa17.16■□□□□ 0.34
U2AF1-201ENST00000291552 OR10G9Q8NGN4 311 aa17.16■□□□□ 0.34
U2AF1-201ENST00000291552 OR10G7Q8NGN6 311 aa17.16■□□□□ 0.34
U2AF1-201ENST00000291552 TRAV4A0A0B4J268 109 aa17.15■□□□□ 0.34
U2AF1-201ENST00000291552 TYMSP04818 313 aa17.15■□□□□ 0.34
U2AF1-201ENST00000291552 ARL14EPLP0DKL9 152 aa17.15■□□□□ 0.34
U2AF1-201ENST00000291552 GYPEP15421 78 aa17.15■□□□□ 0.34
U2AF1-201ENST00000291552 WFDC10BQ8IUB3 73 aa17.15■□□□□ 0.34
U2AF1-201ENST00000291552 SRIP30626 198 aa17.14■□□□□ 0.33
U2AF1-201ENST00000291552 FUSP35637 526 aaKnown RBP eCLIP17.14■□□□□ 0.33
U2AF1-201ENST00000291552 FAM74A1Q5RGS3 127 aa17.14■□□□□ 0.33
U2AF1-201ENST00000291552 Q8N1X5 172 aa17.14■□□□□ 0.33
U2AF1-201ENST00000291552 TREM1Q9NP99 234 aa17.14■□□□□ 0.33
U2AF1-201ENST00000291552 TRAV21A0A0B4J279 112 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms