RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 GAFA1Q96PS6 74 aa8.63□□□□□ -1.03
PKNOX1-201ENST00000291547 TECTAO75443 2155 aa8.63□□□□□ -1.03
PKNOX1-201ENST00000291547 IGKV1D-17A0A075B6S4 117 aa8.63□□□□□ -1.03
PKNOX1-201ENST00000291547 EFNA4P52798 201 aa8.63□□□□□ -1.03
PKNOX1-201ENST00000291547 TMEM75Q8N9X5 138 aa8.63□□□□□ -1.03
PKNOX1-201ENST00000291547 C8orf49Q96NF6 230 aa8.63□□□□□ -1.03
PKNOX1-201ENST00000291547 PCNX2A6NKB5 2137 aa8.63□□□□□ -1.03
PKNOX1-201ENST00000291547 IL17RELQ6ZVW7 336 aa8.63□□□□□ -1.03
PKNOX1-201ENST00000291547 SCRT2Q9NQ03 307 aa8.63□□□□□ -1.03
PKNOX1-201ENST00000291547 IGHV3-16A0A0C4DH30 117 aa8.62□□□□□ -1.03
PKNOX1-201ENST00000291547 I3L3M4 83 aa8.62□□□□□ -1.03
PKNOX1-201ENST00000291547 TDRG1Q3Y452 100 aa8.62□□□□□ -1.03
PKNOX1-201ENST00000291547 CEND1Q8N111 149 aa8.62□□□□□ -1.03
PKNOX1-201ENST00000291547 SYNJ2BPP57105 145 aa8.62□□□□□ -1.03
PKNOX1-201ENST00000291547 KLF5Q13887 457 aaPredicted RBP8.62□□□□□ -1.03
PKNOX1-201ENST00000291547 KLHL30-AS1Q8NEE0 82 aa8.62□□□□□ -1.03
PKNOX1-201ENST00000291547 DSCR8Q96T75 97 aa8.62□□□□□ -1.03
PKNOX1-201ENST00000291547 FAM223BA6NKX1 122 aa8.61□□□□□ -1.03
PKNOX1-201ENST00000291547 F8VRH5 84 aa8.61□□□□□ -1.03
PKNOX1-201ENST00000291547 ANXA2RQ3ZCQ2 193 aa8.61□□□□□ -1.03
PKNOX1-201ENST00000291547 FAM223AQ8IWN6 122 aa8.61□□□□□ -1.03
PKNOX1-201ENST00000291547 V9GYV3 84 aa8.61□□□□□ -1.03
PKNOX1-201ENST00000291547 TRAV26-2A0A0B4J265 109 aa8.61□□□□□ -1.03
PKNOX1-201ENST00000291547 IGHG4P01861 327 aa8.61□□□□□ -1.03
PKNOX1-201ENST00000291547 HLA-DRB4P13762 266 aa8.61□□□□□ -1.03
PKNOX1-201ENST00000291547 HERV-K104P63124 156 aa8.61□□□□□ -1.03
PKNOX1-201ENST00000291547 SPINK13Q1W4C9 94 aa8.61□□□□□ -1.03
PKNOX1-201ENST00000291547 NKAPP1Q8N9T2 125 aa8.61□□□□□ -1.03
PKNOX1-201ENST00000291547 HS3ST6Q96QI5 342 aa8.61□□□□□ -1.03
PKNOX1-201ENST00000291547 SIGLEC8Q9NYZ4 499 aa8.61□□□□□ -1.03
PKNOX1-201ENST00000291547 XCL2Q9UBD3 114 aa8.61□□□□□ -1.03
PKNOX1-201ENST00000291547 HLA-DRB4X5D2U9 266 aa8.61□□□□□ -1.03
PKNOX1-201ENST00000291547 WNK1Q9H4A3 2382 aa8.61□□□□□ -1.03
PKNOX1-201ENST00000291547 M0R1W7 72 aa8.61□□□□□ -1.03
PKNOX1-201ENST00000291547 TRBV25-1A0A075B6N4 114 aa8.61□□□□□ -1.03
PKNOX1-201ENST00000291547 HLA-DMBP28068 263 aa8.61□□□□□ -1.03
PKNOX1-201ENST00000291547 TAL2Q16559 108 aa8.61□□□□□ -1.03
PKNOX1-201ENST00000291547 C1orf43Q9BWL3 253 aa8.61□□□□□ -1.03
PKNOX1-201ENST00000291547 COL4A3Q01955 1670 aa8.61□□□□□ -1.03
PKNOX1-201ENST00000291547 KIAA1549LQ6ZVL6 1849 aa8.6□□□□□ -1.03
PKNOX1-201ENST00000291547 TRBV19A0A075B6N1 114 aa8.6□□□□□ -1.03
PKNOX1-201ENST00000291547 TEX48A0A1B0GUV7 120 aa8.6□□□□□ -1.03
PKNOX1-201ENST00000291547 B4DSR2 109 aa8.6□□□□□ -1.03
PKNOX1-201ENST00000291547 J3QQQ9 107 aa8.6□□□□□ -1.03
PKNOX1-201ENST00000291547 C5orf47Q569G3 176 aa8.6□□□□□ -1.03
PKNOX1-201ENST00000291547 FAM231DQ6ZW35 169 aa8.6□□□□□ -1.03
PKNOX1-201ENST00000291547 SPACA3Q8IXA5 215 aa8.6□□□□□ -1.03
PKNOX1-201ENST00000291547 IGKV1-6A0A0C4DH72 117 aa8.6□□□□□ -1.03
PKNOX1-201ENST00000291547 hADV29S1A0JD25 119 aa8.6□□□□□ -1.03
PKNOX1-201ENST00000291547 NPYP01303 97 aa8.6□□□□□ -1.03
PKNOX1-201ENST00000291547 CFHR3Q02985 330 aa8.6□□□□□ -1.03
PKNOX1-201ENST00000291547 KLK9Q9UKQ9 250 aa8.6□□□□□ -1.03
PKNOX1-201ENST00000291547 C12orf74Q32Q52 190 aa8.59□□□□□ -1.03
PKNOX1-201ENST00000291547 LYPD2Q6UXB3 125 aa8.59□□□□□ -1.03
PKNOX1-201ENST00000291547 IGHV3-38A0A0C4DH36 116 aa8.59□□□□□ -1.03
PKNOX1-201ENST00000291547 WIPF3A6NGB9 483 aa8.59□□□□□ -1.03
PKNOX1-201ENST00000291547 DEFB121Q5J5C9 76 aa8.59□□□□□ -1.03
PKNOX1-201ENST00000291547 SMIM2Q9BVW6 85 aa8.59□□□□□ -1.03
PKNOX1-201ENST00000291547 ZNF726P1Q15940 193 aa8.59□□□□□ -1.03
PKNOX1-201ENST00000291547 PRSS33Q8NF86 280 aa8.59□□□□□ -1.03
PKNOX1-201ENST00000291547 PRR25Q96S07 402 aa8.59□□□□□ -1.03
PKNOX1-201ENST00000291547 CTRLP40313 264 aa8.59□□□□□ -1.03
PKNOX1-201ENST00000291547 PAX9P55771 341 aa8.59□□□□□ -1.03
PKNOX1-201ENST00000291547 ZNRF2Q8NHG8 242 aa8.59□□□□□ -1.03
PKNOX1-201ENST00000291547 ZNRD1Q9P1U0 126 aa8.59□□□□□ -1.03
PKNOX1-201ENST00000291547 TRAV13-2A0A0B4J235 113 aa8.58□□□□□ -1.04
PKNOX1-201ENST00000291547 DSCR9P59020 149 aa8.58□□□□□ -1.04
PKNOX1-201ENST00000291547 C8orf86Q6ZUL3 223 aa8.58□□□□□ -1.04
PKNOX1-201ENST00000291547 SMIM27A0A1W2PRY6 76 aa8.58□□□□□ -1.04
PKNOX1-201ENST00000291547 NUPR1O60356 82 aa8.58□□□□□ -1.04
PKNOX1-201ENST00000291547 NBL1P41271 181 aa8.58□□□□□ -1.04
PKNOX1-201ENST00000291547 RNF166Q96A37 237 aaPredicted RBP8.58□□□□□ -1.04
PKNOX1-201ENST00000291547 TMEM243Q9BU79 118 aa8.58□□□□□ -1.04
PKNOX1-201ENST00000291547 DKK2Q9UBU2 259 aa8.58□□□□□ -1.04
PKNOX1-201ENST00000291547 LMO1P25800 156 aa8.58□□□□□ -1.04
PKNOX1-201ENST00000291547 SAA4P35542 130 aa8.58□□□□□ -1.04
PKNOX1-201ENST00000291547 TMEM14BQ9NUH8 114 aa8.58□□□□□ -1.04
PKNOX1-201ENST00000291547 IGHV1OR15-1A0A075B7D0 117 aa8.57□□□□□ -1.04
PKNOX1-201ENST00000291547 F5H768 121 aa8.57□□□□□ -1.04
PKNOX1-201ENST00000291547 LY6HO94772 140 aa8.57□□□□□ -1.04
PKNOX1-201ENST00000291547 ZNF106Q9H2Y7 1883 aaKnown RBP8.57□□□□□ -1.04
PKNOX1-201ENST00000291547 CLPSP04118 112 aa8.57□□□□□ -1.04
PKNOX1-201ENST00000291547 CRYGCP07315 174 aa8.57□□□□□ -1.04
PKNOX1-201ENST00000291547 ATP6V0E2Q8NHE4 81 aa8.57□□□□□ -1.04
PKNOX1-201ENST00000291547 YLPM1P49750 1951 aaKnown RBP8.57□□□□□ -1.04
PKNOX1-201ENST00000291547 MUC22E2RYF6 1773 aaPredicted RBP8.57□□□□□ -1.04
PKNOX1-201ENST00000291547 NDUFS7O75251 213 aa8.57□□□□□ -1.04
PKNOX1-201ENST00000291547 CFC1BP0CG36 223 aa8.57□□□□□ -1.04
PKNOX1-201ENST00000291547 CFC1P0CG37 223 aa8.57□□□□□ -1.04
PKNOX1-201ENST00000291547 PRB1P04280 392 aa8.56□□□□□ -1.04
PKNOX1-201ENST00000291547 NDUFA4L2Q9NRX3 87 aa8.56□□□□□ -1.04
PKNOX1-201ENST00000291547 COL8A2P25067 703 aa8.56□□□□□ -1.04
PKNOX1-201ENST00000291547 DNAH12Q6ZR08 3092 aa8.56□□□□□ -1.04
PKNOX1-201ENST00000291547 ATP6V0E1O15342 81 aa8.56□□□□□ -1.04
PKNOX1-201ENST00000291547 LY6DQ14210 128 aa8.56□□□□□ -1.04
PKNOX1-201ENST00000291547 WIPF2Q8TF74 440 aaPredicted RBP8.56□□□□□ -1.04
PKNOX1-201ENST00000291547 PRSS29PA6NIE9 313 aa8.55□□□□□ -1.04
PKNOX1-201ENST00000291547 EGR2P11161 476 aaPredicted RBP8.55□□□□□ -1.04
PKNOX1-201ENST00000291547 THAP8Q8NA92 274 aa8.55□□□□□ -1.04
PKNOX1-201ENST00000291547 FAM110DQ8TAY7 271 aaPredicted RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms