RNA–Protein interactions for RNA: ENST00000291525.11

TFF3-201, Transcript of trefoil factor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TFF3, Length 407 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-201ENST00000291525 PRO0255Q9UI72 69 aa11.96□□□□□ -0.49
TFF3-201ENST00000291525 H0YIZ8 118 aa11.95□□□□□ -0.5
TFF3-201ENST00000291525 RANP62826 216 aaKnown RBP11.95□□□□□ -0.5
TFF3-201ENST00000291525 FFAR4Q5NUL3 377 aa11.95□□□□□ -0.5
TFF3-201ENST00000291525 Q8TAT8 98 aa11.95□□□□□ -0.5
TFF3-201ENST00000291525 SCGB1C1Q8TD33 95 aa11.95□□□□□ -0.5
TFF3-201ENST00000291525 PPP1R1CQ8WVI7 109 aa11.95□□□□□ -0.5
TFF3-201ENST00000291525 MRPL16Q9NX20 251 aaKnown RBP11.95□□□□□ -0.5
TFF3-201ENST00000291525 TP53TG3Q9ULZ0 132 aa11.95□□□□□ -0.5
TFF3-201ENST00000291525 IGHV3-53P01767 116 aa11.94□□□□□ -0.5
TFF3-201ENST00000291525 ZNF266Q14584 549 aa11.94□□□□□ -0.5
TFF3-201ENST00000291525 MRPL23Q16540 153 aaKnown RBP11.94□□□□□ -0.5
TFF3-201ENST00000291525 HSPB11Q9Y547 144 aa11.94□□□□□ -0.5
TFF3-201ENST00000291525 LENEPQ9Y5L5 61 aa11.94□□□□□ -0.5
TFF3-201ENST00000291525 SSNA1O43805 119 aa11.93□□□□□ -0.5
TFF3-201ENST00000291525 LINC00315P59091 139 aa11.93□□□□□ -0.5
TFF3-201ENST00000291525 MAPKAPK5-AS1Q8N8E1 139 aa11.93□□□□□ -0.5
TFF3-201ENST00000291525 HHLA3Q9XRX5 114 aa11.93□□□□□ -0.5
TFF3-201ENST00000291525 RYR1P21817 5038 aa11.93□□□□□ -0.5
TFF3-201ENST00000291525 TRGV11A0A075B6L2 103 aa11.92□□□□□ -0.5
TFF3-201ENST00000291525 TRGV4A0A0C4DH28 118 aa11.92□□□□□ -0.5
TFF3-201ENST00000291525 NXPH4O95158 308 aa11.92□□□□□ -0.5
TFF3-201ENST00000291525 MPC2O95563 127 aa11.92□□□□□ -0.5
TFF3-201ENST00000291525 CRYBA4P53673 196 aa11.92□□□□□ -0.5
TFF3-201ENST00000291525 H2BFSP57053 126 aa11.92□□□□□ -0.5
TFF3-201ENST00000291525 DEFA1P59665 94 aa11.92□□□□□ -0.5
TFF3-201ENST00000291525 DEFA3P59666 94 aa11.92□□□□□ -0.5
TFF3-201ENST00000291525 FAM74A1Q5RGS3 127 aa11.92□□□□□ -0.5
TFF3-201ENST00000291525 FAM159AQ6UWV7 190 aa11.92□□□□□ -0.5
TFF3-201ENST00000291525 MARVELD1Q9BSK0 173 aa11.92□□□□□ -0.5
TFF3-201ENST00000291525 SPXQ9BT56 116 aa11.92□□□□□ -0.5
TFF3-201ENST00000291525 DIRC3C9JPN6 131 aa11.91□□□□□ -0.5
TFF3-201ENST00000291525 EREGO14944 169 aa11.91□□□□□ -0.5
TFF3-201ENST00000291525 RPL12P30050 165 aaKnown RBP11.91□□□□□ -0.5
TFF3-201ENST00000291525 MUC21Q5SSG8 566 aa11.91□□□□□ -0.5
TFF3-201ENST00000291525 Q6AWC8 147 aa11.91□□□□□ -0.5
TFF3-201ENST00000291525 Q6ZQT7 251 aa11.91□□□□□ -0.5
TFF3-201ENST00000291525 NEGR1Q7Z3B1 354 aa11.91□□□□□ -0.5
TFF3-201ENST00000291525 CMTM2Q8TAZ6 248 aa11.91□□□□□ -0.5
TFF3-201ENST00000291525 PCNPQ8WW12 178 aaKnown RBP11.91□□□□□ -0.5
TFF3-201ENST00000291525 TMED6Q8WW62 240 aa11.91□□□□□ -0.5
TFF3-201ENST00000291525 C8orf49Q96NF6 230 aa11.91□□□□□ -0.5
TFF3-201ENST00000291525 OTORQ9NRC9 128 aa11.91□□□□□ -0.5
TFF3-201ENST00000291525 FHL2Q14192 279 aa11.9□□□□□ -0.5
TFF3-201ENST00000291525 ACOT6Q3I5F7 207 aaPredicted RBP11.9□□□□□ -0.5
TFF3-201ENST00000291525 SMIM3Q9BZL3 60 aa11.9□□□□□ -0.5
TFF3-201ENST00000291525 PTTG2Q9NZH5 202 aa11.9□□□□□ -0.5
TFF3-201ENST00000291525 TRAV9-2A0A087WT02 112 aa11.89□□□□□ -0.51
TFF3-201ENST00000291525 A0A1W2PPV4 95 aa11.89□□□□□ -0.51
TFF3-201ENST00000291525 SRIP30626 198 aa11.89□□□□□ -0.51
TFF3-201ENST00000291525 IFITM3Q01628 133 aa11.89□□□□□ -0.51
TFF3-201ENST00000291525 TMEM183BQ1AE95 376 aa11.89□□□□□ -0.51
TFF3-201ENST00000291525 PQLC2Q6ZP29 291 aa11.89□□□□□ -0.51
TFF3-201ENST00000291525 NFE4Q86UQ8 179 aa11.89□□□□□ -0.51
TFF3-201ENST00000291525 IQCF2Q8IXL9 164 aa11.89□□□□□ -0.51
TFF3-201ENST00000291525 TMEM183AQ8IXX5 376 aa11.89□□□□□ -0.51
TFF3-201ENST00000291525 OR10G4Q8NGN3 311 aa11.89□□□□□ -0.51
TFF3-201ENST00000291525 HYLS1Q96M11 299 aa11.89□□□□□ -0.51
TFF3-201ENST00000291525 KRTAP4-5Q9BYR2 181 aa11.89□□□□□ -0.51
TFF3-201ENST00000291525 ORM1P02763 201 aa11.88□□□□□ -0.51
TFF3-201ENST00000291525 LYPD5Q6UWN5 251 aa11.88□□□□□ -0.51
TFF3-201ENST00000291525 ARL6IP6Q8N6S5 226 aa11.88□□□□□ -0.51
TFF3-201ENST00000291525 RASL10AQ92737 203 aa11.88□□□□□ -0.51
TFF3-201ENST00000291525 MDFICQ9P1T7 246 aa11.88□□□□□ -0.51
TFF3-201ENST00000291525 MBD2Q9UBB5 411 aa11.88□□□□□ -0.51
TFF3-201ENST00000291525 NAGKQ9UJ70 344 aa11.88□□□□□ -0.51
TFF3-201ENST00000291525 RPH3ALQ9UNE2 315 aa11.88□□□□□ -0.51
TFF3-201ENST00000291525 PGPA6NDG6 321 aa11.87□□□□□ -0.51
TFF3-201ENST00000291525 KRTAP10-2P60368 255 aa11.87□□□□□ -0.51
TFF3-201ENST00000291525 ERVFC1-1P60608 527 aa11.87□□□□□ -0.51
TFF3-201ENST00000291525 LY96Q9Y6Y9 160 aa11.87□□□□□ -0.51
TFF3-201ENST00000291525 HSPG2P98160 4391 aa11.87□□□□□ -0.51
TFF3-201ENST00000291525 TRAV21A0A0B4J279 112 aa11.86□□□□□ -0.51
TFF3-201ENST00000291525 C9JCJ5 164 aa11.86□□□□□ -0.51
TFF3-201ENST00000291525 K7EP13 123 aa11.86□□□□□ -0.51
TFF3-201ENST00000291525 SFTA3P0C7M3 94 aa11.86□□□□□ -0.51
TFF3-201ENST00000291525 TDRG1Q3Y452 100 aa11.86□□□□□ -0.51
TFF3-201ENST00000291525 Q6ZRN7 208 aaPredicted RBP11.86□□□□□ -0.51
TFF3-201ENST00000291525 Q8N1X5 172 aa11.86□□□□□ -0.51
TFF3-201ENST00000291525 TXNDC17Q9BRA2 123 aa11.86□□□□□ -0.51
TFF3-201ENST00000291525 TRAV4A0A0B4J268 109 aa11.85□□□□□ -0.51
TFF3-201ENST00000291525 K7EQD1 137 aa11.85□□□□□ -0.51
TFF3-201ENST00000291525 GYPEP15421 78 aa11.85□□□□□ -0.51
TFF3-201ENST00000291525 GOLT1AQ6ZVE7 132 aa11.85□□□□□ -0.51
TFF3-201ENST00000291525 ZNF479Q96JC4 524 aa11.85□□□□□ -0.51
TFF3-201ENST00000291525 PGPEP1Q9NXJ5 209 aa11.85□□□□□ -0.51
TFF3-201ENST00000291525 LRP1BQ9NZR2 4599 aa11.84□□□□□ -0.51
TFF3-201ENST00000291525 A6NHS1 94 aa11.84□□□□□ -0.51
TFF3-201ENST00000291525 M0R2P5 195 aa11.84□□□□□ -0.51
TFF3-201ENST00000291525 EVI2AP22794 236 aa11.84□□□□□ -0.51
TFF3-201ENST00000291525 CDPF1Q6NVV7 123 aa11.84□□□□□ -0.51
TFF3-201ENST00000291525 SH2D6Q7Z4S9 175 aa11.84□□□□□ -0.51
TFF3-201ENST00000291525 OR4C5Q8NGB2 326 aa11.84□□□□□ -0.51
TFF3-201ENST00000291525 KCNS1Q96KK3 526 aa11.84□□□□□ -0.51
TFF3-201ENST00000291525 NDFIP1Q9BT67 221 aa11.84□□□□□ -0.51
TFF3-201ENST00000291525 SDF2L1Q9HCN8 221 aa11.84□□□□□ -0.51
TFF3-201ENST00000291525 SERTM2A0A1B0GWG4 89 aa11.83□□□□□ -0.52
TFF3-201ENST00000291525 TREM1Q9NP99 234 aa11.83□□□□□ -0.52
TFF3-201ENST00000291525 SCRT2Q9NQ03 307 aa11.83□□□□□ -0.52
TFF3-201ENST00000291525 RAB2AP61019 212 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms