RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 F6UZH7 168 aa6.86□□□□□ -1.31
CCDC58-201ENST00000291458 IGHV3-53P01767 116 aa6.86□□□□□ -1.31
CCDC58-201ENST00000291458 GIPP09681 153 aaPredicted RBP6.86□□□□□ -1.31
CCDC58-201ENST00000291458 ARL14EPLP0DKL9 152 aa6.86□□□□□ -1.31
CCDC58-201ENST00000291458 ATP6V0CP27449 155 aa6.86□□□□□ -1.31
CCDC58-201ENST00000291458 CDC34P49427 236 aaPredicted RBP6.86□□□□□ -1.31
CCDC58-201ENST00000291458 ZNF138P52744 262 aa6.86□□□□□ -1.31
CCDC58-201ENST00000291458 LINC00310P59036 64 aa6.86□□□□□ -1.31
CCDC58-201ENST00000291458 RGS21Q2M5E4 152 aa6.86□□□□□ -1.31
CCDC58-201ENST00000291458 C9orf47Q6ZRZ4 202 aa6.86□□□□□ -1.31
CCDC58-201ENST00000291458 GOLT1AQ6ZVE7 132 aa6.86□□□□□ -1.31
CCDC58-201ENST00000291458 C15orf53Q8NAA6 179 aa6.86□□□□□ -1.31
CCDC58-201ENST00000291458 CMTM2Q8TAZ6 248 aa6.86□□□□□ -1.31
CCDC58-201ENST00000291458 FAM210BQ96KR6 192 aa6.86□□□□□ -1.31
CCDC58-201ENST00000291458 SGK494Q96LW2 274 aa6.86□□□□□ -1.31
CCDC58-201ENST00000291458 ARPC5LQ9BPX5 153 aa6.86□□□□□ -1.31
CCDC58-201ENST00000291458 ZNF492Q9P255 531 aa6.86□□□□□ -1.31
CCDC58-201ENST00000291458 KLF12Q9Y4X4 402 aa6.86□□□□□ -1.31
CCDC58-201ENST00000291458 PLECQ15149 4684 aaKnown RBP6.86□□□□□ -1.31
CCDC58-201ENST00000291458 TRAV26-1A0A087WT03 109 aa6.85□□□□□ -1.31
CCDC58-201ENST00000291458 TRAV8-1A0A0A6YYK1 113 aa6.85□□□□□ -1.31
CCDC58-201ENST00000291458 PGPA6NDG6 321 aa6.85□□□□□ -1.31
CCDC58-201ENST00000291458 DIRC3C9JPN6 131 aa6.85□□□□□ -1.31
CCDC58-201ENST00000291458 SMLR1H3BR10 107 aa6.85□□□□□ -1.31
CCDC58-201ENST00000291458 HOXA5P20719 270 aa6.85□□□□□ -1.31
CCDC58-201ENST00000291458 ZNF266Q14584 549 aa6.85□□□□□ -1.31
CCDC58-201ENST00000291458 EIF4E3Q8N5X7 224 aaKnown RBP6.85□□□□□ -1.31
CCDC58-201ENST00000291458 ZNF680Q8NEM1 530 aa6.85□□□□□ -1.31
CCDC58-201ENST00000291458 OR2T35Q8NGX2 323 aa6.85□□□□□ -1.31
CCDC58-201ENST00000291458 FAM19A4Q96LR4 140 aa6.85□□□□□ -1.31
CCDC58-201ENST00000291458 AQP10Q96PS8 301 aa6.85□□□□□ -1.31
CCDC58-201ENST00000291458 DNAH1Q9P2D7 4330 aa6.85□□□□□ -1.31
CCDC58-201ENST00000291458 IGHV1OR15-1A0A075B7D0 117 aa6.84□□□□□ -1.31
CCDC58-201ENST00000291458 ZNF324O75467 553 aaPredicted RBP6.84□□□□□ -1.31
CCDC58-201ENST00000291458 CRISP2P16562 243 aa6.84□□□□□ -1.31
CCDC58-201ENST00000291458 RPL7L1Q6DKI1 246 aaKnown RBP6.84□□□□□ -1.31
CCDC58-201ENST00000291458 PQLC2Q6ZP29 291 aa6.84□□□□□ -1.31
CCDC58-201ENST00000291458 C11orf72Q8NBR9 251 aa6.84□□□□□ -1.31
CCDC58-201ENST00000291458 INO80EQ8NBZ0 244 aaPredicted RBP6.84□□□□□ -1.31
CCDC58-201ENST00000291458 GNPNAT1Q96EK6 184 aaPredicted RBP6.84□□□□□ -1.31
CCDC58-201ENST00000291458 CDIP1Q9H305 208 aa6.84□□□□□ -1.31
CCDC58-201ENST00000291458 OTORQ9NRC9 128 aa6.84□□□□□ -1.31
CCDC58-201ENST00000291458 RNF222A6NCQ9 220 aa6.83□□□□□ -1.32
CCDC58-201ENST00000291458 GCHFRP30047 84 aa6.83□□□□□ -1.32
CCDC58-201ENST00000291458 TCL1AP56279 114 aa6.83□□□□□ -1.32
CCDC58-201ENST00000291458 ZNF415Q09FC8 603 aa6.83□□□□□ -1.32
CCDC58-201ENST00000291458 TMEM183BQ1AE95 376 aa6.83□□□□□ -1.32
CCDC58-201ENST00000291458 KRTAP19-4Q3LI73 84 aa6.83□□□□□ -1.32
CCDC58-201ENST00000291458 FAM74A1Q5RGS3 127 aa6.83□□□□□ -1.32
CCDC58-201ENST00000291458 SSX7Q7RTT5 188 aa6.83□□□□□ -1.32
CCDC58-201ENST00000291458 TMEM183AQ8IXX5 376 aa6.83□□□□□ -1.32
CCDC58-201ENST00000291458 LINC00612Q8N6U2 182 aa6.83□□□□□ -1.32
CCDC58-201ENST00000291458 EPPK1P58107 5090 aaKnown RBP6.82□□□□□ -1.32
CCDC58-201ENST00000291458 BORCS7-ASMTA0A0B4J1R7 106 aa6.82□□□□□ -1.32
CCDC58-201ENST00000291458 RBAKDNA6NC62 111 aa6.82□□□□□ -1.32
CCDC58-201ENST00000291458 PRSS29PA6NIE9 313 aa6.82□□□□□ -1.32
CCDC58-201ENST00000291458 RTL8CO15255 209 aa6.82□□□□□ -1.32
CCDC58-201ENST00000291458 ARPC5O15511 151 aa6.82□□□□□ -1.32
CCDC58-201ENST00000291458 UBE2G2P60604 165 aa6.82□□□□□ -1.32
CCDC58-201ENST00000291458 LYPD1Q8N2G4 141 aa6.82□□□□□ -1.32
CCDC58-201ENST00000291458 OR2G3Q8NGZ4 309 aa6.82□□□□□ -1.32
CCDC58-201ENST00000291458 RXFP4Q8TDU9 374 aa6.82□□□□□ -1.32
CCDC58-201ENST00000291458 RAB24Q969Q5 203 aa6.82□□□□□ -1.32
CCDC58-201ENST00000291458 PSMG3Q9BT73 122 aaPredicted RBP6.82□□□□□ -1.32
CCDC58-201ENST00000291458 TNFSF18Q9UNG2 199 aa6.82□□□□□ -1.32
CCDC58-201ENST00000291458 LINC00588Q9Y4M8 146 aa6.82□□□□□ -1.32
CCDC58-201ENST00000291458 KMT2AQ03164 3969 aa6.82□□□□□ -1.32
CCDC58-201ENST00000291458 A0A096LPF7 62 aa6.81□□□□□ -1.32
CCDC58-201ENST00000291458 FGF8P55075 233 aaPredicted RBP6.81□□□□□ -1.32
CCDC58-201ENST00000291458 CCL18P55774 89 aa6.81□□□□□ -1.32
CCDC58-201ENST00000291458 DAZ2Q13117 558 aaKnown RBP6.81□□□□□ -1.32
CCDC58-201ENST00000291458 ANXA2RQ3ZCQ2 193 aa6.81□□□□□ -1.32
CCDC58-201ENST00000291458 RNF212Q495C1 297 aa6.81□□□□□ -1.32
CCDC58-201ENST00000291458 C8orf49Q96NF6 230 aa6.81□□□□□ -1.32
CCDC58-201ENST00000291458 ACTR3CQ9C0K3 210 aaPredicted RBP6.81□□□□□ -1.32
CCDC58-201ENST00000291458 MDFICQ9P1T7 246 aa6.81□□□□□ -1.32
CCDC58-201ENST00000291458 PLA2G2DQ9UNK4 145 aa6.81□□□□□ -1.32
CCDC58-201ENST00000291458 TRGV11A0A075B6L2 103 aa6.8□□□□□ -1.32
CCDC58-201ENST00000291458 G3V3Q6 166 aa6.8□□□□□ -1.32
CCDC58-201ENST00000291458 SPINK4O60575 86 aa6.8□□□□□ -1.32
CCDC58-201ENST00000291458 NMBP08949 121 aa6.8□□□□□ -1.32
CCDC58-201ENST00000291458 SFTA3P0C7M3 94 aa6.8□□□□□ -1.32
CCDC58-201ENST00000291458 STAG3L2P0CL84 134 aa6.8□□□□□ -1.32
CCDC58-201ENST00000291458 STAG3L3P0CL85 134 aa6.8□□□□□ -1.32
CCDC58-201ENST00000291458 LGALS9BQ3B8N2 356 aa6.8□□□□□ -1.32
CCDC58-201ENST00000291458 AKR1C8PQ5T2L2 129 aa6.8□□□□□ -1.32
CCDC58-201ENST00000291458 FAM159AQ6UWV7 190 aa6.8□□□□□ -1.32
CCDC58-201ENST00000291458 MUC4Q99102 2169 aa6.8□□□□□ -1.32
CCDC58-201ENST00000291458 LINC00467Q9BRT7 94 aa6.8□□□□□ -1.32
CCDC58-201ENST00000291458 TREM1Q9NP99 234 aa6.8□□□□□ -1.32
CCDC58-201ENST00000291458 A0A1B0GV50 99 aa6.79□□□□□ -1.32
CCDC58-201ENST00000291458 GGTLC3B5MD39 225 aa6.79□□□□□ -1.32
CCDC58-201ENST00000291458 GNRH2O43555 120 aa6.79□□□□□ -1.32
CCDC58-201ENST00000291458 CXorf1O96002 111 aa6.79□□□□□ -1.32
CCDC58-201ENST00000291458 MBP02144 154 aa6.79□□□□□ -1.32
CCDC58-201ENST00000291458 ZNF726P1Q15940 193 aa6.79□□□□□ -1.32
CCDC58-201ENST00000291458 IBA57Q5T440 356 aaKnown RBP6.79□□□□□ -1.32
CCDC58-201ENST00000291458 C1orf134Q5TEV5 83 aa6.79□□□□□ -1.32
CCDC58-201ENST00000291458 Q6AWC8 147 aa6.79□□□□□ -1.32
CCDC58-201ENST00000291458 Q6ZR54 194 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 155.4 ms