RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 HHLA3Q9XRX5 114 aa9.67□□□□□ -0.86
TPM1-202ENST00000288398 TRBV7-9A0A0J9YWB2 115 aa9.66□□□□□ -0.86
TPM1-202ENST00000288398 SIX6O95475 246 aa9.66□□□□□ -0.86
TPM1-202ENST00000288398 PET100P0DJ07 73 aa9.66□□□□□ -0.86
TPM1-202ENST00000288398 TAS2R45P59539 299 aa9.66□□□□□ -0.86
TPM1-202ENST00000288398 RANP62826 216 aaKnown RBP9.66□□□□□ -0.86
TPM1-202ENST00000288398 MUC21Q5SSG8 566 aa9.66□□□□□ -0.86
TPM1-202ENST00000288398 NFE4Q86UQ8 179 aa9.66□□□□□ -0.86
TPM1-202ENST00000288398 Q8TAT8 98 aa9.66□□□□□ -0.86
TPM1-202ENST00000288398 SCGB1C1Q8TD33 95 aa9.66□□□□□ -0.86
TPM1-202ENST00000288398 FAM167A-AS1Q96KT0 104 aa9.66□□□□□ -0.86
TPM1-202ENST00000288398 C8orf49Q96NF6 230 aa9.66□□□□□ -0.86
TPM1-202ENST00000288398 WDR61Q9GZS3 305 aaKnown RBP9.66□□□□□ -0.86
TPM1-202ENST00000288398 SCRT2Q9NQ03 307 aa9.66□□□□□ -0.86
TPM1-202ENST00000288398 TRGV11A0A075B6L2 103 aa9.65□□□□□ -0.86
TPM1-202ENST00000288398 RBAKDNA6NC62 111 aa9.65□□□□□ -0.86
TPM1-202ENST00000288398 PRAF2O60831 178 aa9.65□□□□□ -0.86
TPM1-202ENST00000288398 IFNA5P01569 189 aa9.65□□□□□ -0.86
TPM1-202ENST00000288398 SRIP30626 198 aa9.65□□□□□ -0.86
TPM1-202ENST00000288398 KHDC3LQ587J8 217 aa9.65□□□□□ -0.86
TPM1-202ENST00000288398 FAM74A1Q5RGS3 127 aa9.65□□□□□ -0.86
TPM1-202ENST00000288398 FAM159AQ6UWV7 190 aa9.65□□□□□ -0.86
TPM1-202ENST00000288398 NEGR1Q7Z3B1 354 aa9.65□□□□□ -0.86
TPM1-202ENST00000288398 Q8N1X5 172 aa9.65□□□□□ -0.86
TPM1-202ENST00000288398 LYPD1Q8N2G4 141 aa9.65□□□□□ -0.86
TPM1-202ENST00000288398 CMTM2Q8TAZ6 248 aa9.65□□□□□ -0.86
TPM1-202ENST00000288398 FXYD5Q96DB9 178 aa9.65□□□□□ -0.86
TPM1-202ENST00000288398 PHYHIPLQ96FC7 376 aa9.65□□□□□ -0.86
TPM1-202ENST00000288398 OR5AC2Q9NZP5 309 aa9.65□□□□□ -0.86
TPM1-202ENST00000288398 CRYBA4P53673 196 aa9.64□□□□□ -0.87
TPM1-202ENST00000288398 KRTAP10-2P60368 255 aa9.64□□□□□ -0.87
TPM1-202ENST00000288398 FFAR4Q5NUL3 377 aa9.64□□□□□ -0.87
TPM1-202ENST00000288398 PRR9Q5T870 116 aa9.64□□□□□ -0.87
TPM1-202ENST00000288398 ATP5SQ99766 215 aa9.64□□□□□ -0.87
TPM1-202ENST00000288398 SPXQ9BT56 116 aa9.64□□□□□ -0.87
TPM1-202ENST00000288398 PGPEP1Q9NXJ5 209 aa9.64□□□□□ -0.87
TPM1-202ENST00000288398 NAGKQ9UJ70 344 aa9.64□□□□□ -0.87
TPM1-202ENST00000288398 LY96Q9Y6Y9 160 aa9.64□□□□□ -0.87
TPM1-202ENST00000288398 ABCA13Q86UQ4 5058 aa9.63□□□□□ -0.87
TPM1-202ENST00000288398 SSNA1O43805 119 aa9.63□□□□□ -0.87
TPM1-202ENST00000288398 ORM1P02763 201 aa9.63□□□□□ -0.87
TPM1-202ENST00000288398 ZNF266Q14584 549 aa9.63□□□□□ -0.87
TPM1-202ENST00000288398 HYLS1Q96M11 299 aa9.63□□□□□ -0.87
TPM1-202ENST00000288398 TXNDC17Q9BRA2 123 aa9.63□□□□□ -0.87
TPM1-202ENST00000288398 RPH3ALQ9UNE2 315 aa9.63□□□□□ -0.87
TPM1-202ENST00000288398 EVI2AP22794 236 aa9.62□□□□□ -0.87
TPM1-202ENST00000288398 FHL2Q14192 279 aa9.62□□□□□ -0.87
TPM1-202ENST00000288398 TMEM183BQ1AE95 376 aa9.62□□□□□ -0.87
TPM1-202ENST00000288398 LYPD5Q6UWN5 251 aa9.62□□□□□ -0.87
TPM1-202ENST00000288398 TMEM183AQ8IXX5 376 aa9.62□□□□□ -0.87
TPM1-202ENST00000288398 LENEPQ9Y5L5 61 aa9.62□□□□□ -0.87
TPM1-202ENST00000288398 HSPG2P98160 4391 aa9.61□□□□□ -0.87
TPM1-202ENST00000288398 C9JCJ5 164 aa9.61□□□□□ -0.87
TPM1-202ENST00000288398 INMT-MINDY4F8WBC2 141 aa9.61□□□□□ -0.87
TPM1-202ENST00000288398 K7EP13 123 aa9.61□□□□□ -0.87
TPM1-202ENST00000288398 UPK1BO75841 260 aa9.61□□□□□ -0.87
TPM1-202ENST00000288398 CDPF1Q6NVV7 123 aa9.61□□□□□ -0.87
TPM1-202ENST00000288398 Q6ZQT7 251 aa9.61□□□□□ -0.87
TPM1-202ENST00000288398 PPP1R1CQ8WVI7 109 aa9.61□□□□□ -0.87
TPM1-202ENST00000288398 MDFICQ9P1T7 246 aa9.61□□□□□ -0.87
TPM1-202ENST00000288398 A0A1W2PPV4 95 aa9.6□□□□□ -0.87
TPM1-202ENST00000288398 DIRC3C9JPN6 131 aa9.6□□□□□ -0.87
TPM1-202ENST00000288398 SFTA3P0C7M3 94 aa9.6□□□□□ -0.87
TPM1-202ENST00000288398 GYPEP15421 78 aa9.6□□□□□ -0.87
TPM1-202ENST00000288398 Q6AWC8 147 aa9.6□□□□□ -0.87
TPM1-202ENST00000288398 OR4C5Q8NGB2 326 aa9.6□□□□□ -0.87
TPM1-202ENST00000288398 OR10G4Q8NGN3 311 aa9.6□□□□□ -0.87
TPM1-202ENST00000288398 SMIM3Q9BZL3 60 aa9.6□□□□□ -0.87
TPM1-202ENST00000288398 OTORQ9NRC9 128 aa9.6□□□□□ -0.87
TPM1-202ENST00000288398 HSPB11Q9Y547 144 aa9.6□□□□□ -0.87
TPM1-202ENST00000288398 PGPA6NDG6 321 aa9.59□□□□□ -0.87
TPM1-202ENST00000288398 H0YIZ8 118 aa9.59□□□□□ -0.87
TPM1-202ENST00000288398 K7EQD1 137 aa9.59□□□□□ -0.87
TPM1-202ENST00000288398 RPL12P30050 165 aaKnown RBP9.59□□□□□ -0.87
TPM1-202ENST00000288398 DEFA1P59665 94 aa9.59□□□□□ -0.87
TPM1-202ENST00000288398 DEFA3P59666 94 aa9.59□□□□□ -0.87
TPM1-202ENST00000288398 ACOT6Q3I5F7 207 aaPredicted RBP9.59□□□□□ -0.87
TPM1-202ENST00000288398 Q6ZRN7 208 aaPredicted RBP9.59□□□□□ -0.87
TPM1-202ENST00000288398 SH2D6Q7Z4S9 175 aa9.59□□□□□ -0.87
TPM1-202ENST00000288398 IQCF2Q8IXL9 164 aa9.59□□□□□ -0.87
TPM1-202ENST00000288398 TMED6Q8WW62 240 aa9.59□□□□□ -0.87
TPM1-202ENST00000288398 RASL10AQ92737 203 aa9.59□□□□□ -0.87
TPM1-202ENST00000288398 ZNF479Q96JC4 524 aa9.59□□□□□ -0.87
TPM1-202ENST00000288398 MSRB1Q9NZV6 116 aa9.59□□□□□ -0.87
TPM1-202ENST00000288398 MBD2Q9UBB5 411 aa9.59□□□□□ -0.87
TPM1-202ENST00000288398 TRAV4A0A0B4J268 109 aa9.58□□□□□ -0.88
TPM1-202ENST00000288398 TRAV21A0A0B4J279 112 aa9.58□□□□□ -0.88
TPM1-202ENST00000288398 EPM2AB3EWF7 344 aa9.58□□□□□ -0.88
TPM1-202ENST00000288398 M0R2P5 195 aa9.58□□□□□ -0.88
TPM1-202ENST00000288398 MPC2O95563 127 aa9.58□□□□□ -0.88
TPM1-202ENST00000288398 PPT1P50897 306 aa9.58□□□□□ -0.88
TPM1-202ENST00000288398 GOLT1AQ6ZVE7 132 aa9.58□□□□□ -0.88
TPM1-202ENST00000288398 C10orf126Q8N4M7 172 aa9.58□□□□□ -0.88
TPM1-202ENST00000288398 NHLRC2Q8NBF2 726 aa9.58□□□□□ -0.88
TPM1-202ENST00000288398 NDFIP1Q9BT67 221 aa9.58□□□□□ -0.88
TPM1-202ENST00000288398 SDF2L1Q9HCN8 221 aa9.58□□□□□ -0.88
TPM1-202ENST00000288398 LRP1BQ9NZR2 4599 aa9.57□□□□□ -0.88
TPM1-202ENST00000288398 PSCAO43653 123 aa9.57□□□□□ -0.88
TPM1-202ENST00000288398 H2BFSP57053 126 aa9.57□□□□□ -0.88
TPM1-202ENST00000288398 PQLC2Q6ZP29 291 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms