RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 CTSDP07339 412 aaPredicted RBP1.89□□□□□ -2.11
CHD1-201ENST00000284049 NCBP2-AS2Q69YL0 99 aa1.89□□□□□ -2.11
CHD1-201ENST00000284049 DOPEY2Q9Y3R5 2298 aa1.89□□□□□ -2.11
CHD1-201ENST00000284049 DSPPQ9NZW4 1301 aa1.89□□□□□ -2.11
CHD1-201ENST00000284049 HMSDA8MTL9 139 aa1.89□□□□□ -2.11
CHD1-201ENST00000284049 GGTLC3B5MD39 225 aa1.89□□□□□ -2.11
CHD1-201ENST00000284049 K7ERJ3 54 aa1.89□□□□□ -2.11
CHD1-201ENST00000284049 M0R233 179 aa1.89□□□□□ -2.11
CHD1-201ENST00000284049 SUPT4H1P63272 117 aaKnown RBP1.89□□□□□ -2.11
CHD1-201ENST00000284049 LDLRAD2Q5SZI1 272 aa1.89□□□□□ -2.11
CHD1-201ENST00000284049 LINC01545Q5VT33 79 aa1.89□□□□□ -2.11
CHD1-201ENST00000284049 HIGD2AQ9BW72 106 aa1.89□□□□□ -2.11
CHD1-201ENST00000284049 BOKQ9UMX3 212 aaPredicted RBP1.89□□□□□ -2.11
CHD1-201ENST00000284049 TET2Q6N021 2002 aaPredicted RBP1.89□□□□□ -2.11
CHD1-201ENST00000284049 NINQ8N4C6 2090 aa1.89□□□□□ -2.11
CHD1-201ENST00000284049 PINLYPA6NC86 204 aa1.89□□□□□ -2.11
CHD1-201ENST00000284049 ASAH2BP0C7U1 165 aa1.89□□□□□ -2.11
CHD1-201ENST00000284049 LYZL1Q6UWQ5 148 aa1.89□□□□□ -2.11
CHD1-201ENST00000284049 EXOC3-AS1Q8N2X6 119 aa1.89□□□□□ -2.11
CHD1-201ENST00000284049 C10orf111Q8N326 155 aa1.89□□□□□ -2.11
CHD1-201ENST00000284049 C11orf42Q8N5U0 333 aa1.89□□□□□ -2.11
CHD1-201ENST00000284049 IGHV1-58A0A0C4DH39 117 aa1.89□□□□□ -2.11
CHD1-201ENST00000284049 UQCRQO14949 82 aa1.89□□□□□ -2.11
CHD1-201ENST00000284049 PYYP10082 97 aa1.89□□□□□ -2.11
CHD1-201ENST00000284049 ESRGQ1W209 222 aa1.89□□□□□ -2.11
CHD1-201ENST00000284049 SDIM1Q6ZPB5 146 aa1.89□□□□□ -2.11
CHD1-201ENST00000284049 RPS19BP1Q86WX3 136 aaKnown RBP1.89□□□□□ -2.11
CHD1-201ENST00000284049 RPP25LQ8N5L8 163 aaKnown RBP1.89□□□□□ -2.11
CHD1-201ENST00000284049 NAT14Q8WUY8 206 aa1.89□□□□□ -2.11
CHD1-201ENST00000284049 CHCHD1Q96BP2 118 aaKnown RBP1.89□□□□□ -2.11
CHD1-201ENST00000284049 ERG28Q9UKR5 140 aa1.89□□□□□ -2.11
CHD1-201ENST00000284049 ZFC3H1O60293 1989 aaKnown RBP1.89□□□□□ -2.11
CHD1-201ENST00000284049 ARRDC5A6NEK1 342 aa1.88□□□□□ -2.11
CHD1-201ENST00000284049 A8MWP4 228 aa1.88□□□□□ -2.11
CHD1-201ENST00000284049 FNDC10F2Z333 226 aa1.88□□□□□ -2.11
CHD1-201ENST00000284049 LINC00032P0C843 101 aa1.88□□□□□ -2.11
CHD1-201ENST00000284049 FKBP2P26885 142 aaKnown RBP1.88□□□□□ -2.11
CHD1-201ENST00000284049 RPS10P5Q9NQ39 176 aa1.88□□□□□ -2.11
CHD1-201ENST00000284049 TMEM131Q92545 1883 aa1.88□□□□□ -2.11
CHD1-201ENST00000284049 ZNF727A8MUV8 499 aa1.88□□□□□ -2.11
CHD1-201ENST00000284049 FGF12P61328 243 aa1.88□□□□□ -2.11
CHD1-201ENST00000284049 UNQ9165/PRO28630Q6UXU0 137 aa1.88□□□□□ -2.11
CHD1-201ENST00000284049 SOSTDC1Q6X4U4 206 aa1.88□□□□□ -2.11
CHD1-201ENST00000284049 RNF182Q8N6D2 247 aa1.88□□□□□ -2.11
CHD1-201ENST00000284049 ZNF433Q8N7K0 673 aaPredicted RBP1.88□□□□□ -2.11
CHD1-201ENST00000284049 CST9LQ9H4G1 147 aa1.88□□□□□ -2.11
CHD1-201ENST00000284049 TAS2R8Q9NYW2 309 aa1.88□□□□□ -2.11
CHD1-201ENST00000284049 TMEM212A6NML5 194 aa1.88□□□□□ -2.11
CHD1-201ENST00000284049 RPL28P46779 137 aaKnown RBP1.88□□□□□ -2.11
CHD1-201ENST00000284049 LCN15Q6UWW0 184 aa1.88□□□□□ -2.11
CHD1-201ENST00000284049 POP5Q969H6 163 aaKnown RBP1.88□□□□□ -2.11
CHD1-201ENST00000284049 FAM104AQ969W3 186 aa1.88□□□□□ -2.11
CHD1-201ENST00000284049 MED12LQ86YW9 2145 aa1.88□□□□□ -2.11
CHD1-201ENST00000284049 C2orf91Q6ZV80 131 aa1.88□□□□□ -2.11
CHD1-201ENST00000284049 TEN1Q86WV5 123 aa1.88□□□□□ -2.11
CHD1-201ENST00000284049 RETNLBQ9BQ08 111 aa1.88□□□□□ -2.11
CHD1-201ENST00000284049 METTL1Q9UBP6 276 aaKnown RBP1.88□□□□□ -2.11
CHD1-201ENST00000284049 IGLV3-12A0A075B6K2 115 aa1.88□□□□□ -2.11
CHD1-201ENST00000284049 A0A1B0GVX0 72 aa1.88□□□□□ -2.11
CHD1-201ENST00000284049 J3QQQ9 107 aa1.88□□□□□ -2.11
CHD1-201ENST00000284049 MAXP61244 160 aa1.88□□□□□ -2.11
CHD1-201ENST00000284049 OR5D14Q8NGL3 314 aa1.88□□□□□ -2.11
CHD1-201ENST00000284049 ZNF580Q9UK33 172 aa1.88□□□□□ -2.11
CHD1-201ENST00000284049 IGKV2D-24A0A075B6R9 120 aa1.87□□□□□ -2.11
CHD1-201ENST00000284049 TCRBV3S1A0A5B6 114 aa1.87□□□□□ -2.11
CHD1-201ENST00000284049 CSRP1P21291 193 aaKnown RBP1.87□□□□□ -2.11
CHD1-201ENST00000284049 C2orf82Q6UX34 121 aa1.87□□□□□ -2.11
CHD1-201ENST00000284049 WFDC5Q8TCV5 224 aa1.87□□□□□ -2.11
CHD1-201ENST00000284049 SMIM7Q9BQ49 75 aa1.87□□□□□ -2.11
CHD1-201ENST00000284049 SCRT1Q9BWW7 348 aa1.87□□□□□ -2.11
CHD1-201ENST00000284049 IGLV4-60A0A075B6I1 120 aa1.87□□□□□ -2.11
CHD1-201ENST00000284049 TRAV27A0A087WT01 109 aa1.87□□□□□ -2.11
CHD1-201ENST00000284049 A0A0G2JMM0 328 aa1.87□□□□□ -2.11
CHD1-201ENST00000284049 A0A1W2PPB8 328 aa1.87□□□□□ -2.11
CHD1-201ENST00000284049 KIR3DP1A8MWS1 328 aa1.87□□□□□ -2.11
CHD1-201ENST00000284049 SNCGO76070 127 aa1.87□□□□□ -2.11
CHD1-201ENST00000284049 TRGC1P0CF51 173 aa1.87□□□□□ -2.11
CHD1-201ENST00000284049 FABP4P15090 132 aa1.87□□□□□ -2.11
CHD1-201ENST00000284049 MRPL57Q9BQC6 102 aaKnown RBP1.87□□□□□ -2.11
CHD1-201ENST00000284049 MED9Q9NWA0 146 aa1.87□□□□□ -2.11
CHD1-201ENST00000284049 ZNF705FA8MVS1 300 aaPredicted RBP1.87□□□□□ -2.11
CHD1-201ENST00000284049 CRPP02741 224 aa1.87□□□□□ -2.11
CHD1-201ENST00000284049 CD2P06729 351 aa1.87□□□□□ -2.11
CHD1-201ENST00000284049 PLGLB1Q02325 96 aa1.87□□□□□ -2.11
CHD1-201ENST00000284049 LINC00483Q53H64 154 aa1.87□□□□□ -2.11
CHD1-201ENST00000284049 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.87□□□□□ -2.11
CHD1-201ENST00000284049 PP6455Q8WZ26 134 aa1.87□□□□□ -2.11
CHD1-201ENST00000284049 RNF11Q9Y3C5 154 aa1.87□□□□□ -2.11
CHD1-201ENST00000284049 TRGV5A0A0B4J1U4 118 aa1.87□□□□□ -2.11
CHD1-201ENST00000284049 A0A1W2PPR1 153 aa1.87□□□□□ -2.11
CHD1-201ENST00000284049 PSCAO43653 123 aa1.87□□□□□ -2.11
CHD1-201ENST00000284049 LHBP01229 141 aa1.87□□□□□ -2.11
CHD1-201ENST00000284049 HOXB6P17509 224 aaKnown RBP1.87□□□□□ -2.11
CHD1-201ENST00000284049 DYNLT1P63172 113 aa1.87□□□□□ -2.11
CHD1-201ENST00000284049 CCSMST1Q4G0I0 132 aa1.87□□□□□ -2.11
CHD1-201ENST00000284049 C3orf22Q8N5N4 141 aa1.87□□□□□ -2.11
CHD1-201ENST00000284049 TMEM254Q8TBM7 123 aa1.87□□□□□ -2.11
CHD1-201ENST00000284049 SPTSSAQ969W0 71 aa1.87□□□□□ -2.11
CHD1-201ENST00000284049 CEP192Q8TEP8 1941 aa1.87□□□□□ -2.11
CHD1-201ENST00000284049 ATOH7Q8N100 152 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms