RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 IGKV2-40A0A087WW87 121 aaPredicted RBP10□□□□□ -0.81
C9orf3-201ENST00000277198 OR2T8A6NH00 312 aa10□□□□□ -0.81
C9orf3-201ENST00000277198 IGKV2D-40P01614 121 aaPredicted RBP10□□□□□ -0.81
C9orf3-201ENST00000277198 SMAD5-AS1Q9Y6J3 95 aa10□□□□□ -0.81
C9orf3-201ENST00000277198 A0A096LNJ9 63 aa9.99□□□□□ -0.81
C9orf3-201ENST00000277198 TMEM213A2RRL7 107 aa9.99□□□□□ -0.81
C9orf3-201ENST00000277198 HBDP02042 147 aa9.99□□□□□ -0.81
C9orf3-201ENST00000277198 MRPL51Q4U2R6 128 aaKnown RBP9.99□□□□□ -0.81
C9orf3-201ENST00000277198 FBLN7Q53RD9 439 aa9.99□□□□□ -0.81
C9orf3-201ENST00000277198 AMN1Q8IY45 258 aa9.99□□□□□ -0.81
C9orf3-201ENST00000277198 DYNAPQ8N1N2 210 aa9.99□□□□□ -0.81
C9orf3-201ENST00000277198 Q8N9W7 124 aa9.99□□□□□ -0.81
C9orf3-201ENST00000277198 SIRPDQ9H106 197 aa9.99□□□□□ -0.81
C9orf3-201ENST00000277198 FABP5P3A8MUU1 101 aa9.99□□□□□ -0.81
C9orf3-201ENST00000277198 K7EP13 123 aa9.99□□□□□ -0.81
C9orf3-201ENST00000277198 CD5LO43866 347 aa9.99□□□□□ -0.81
C9orf3-201ENST00000277198 IGHG4P01861 327 aa9.99□□□□□ -0.81
C9orf3-201ENST00000277198 GPR183P32249 361 aa9.99□□□□□ -0.81
C9orf3-201ENST00000277198 RHOGP84095 191 aa9.99□□□□□ -0.81
C9orf3-201ENST00000277198 PAX8Q06710 450 aa9.99□□□□□ -0.81
C9orf3-201ENST00000277198 LINC01559Q495D7 138 aa9.99□□□□□ -0.81
C9orf3-201ENST00000277198 ZNF502Q8TBZ5 544 aa9.99□□□□□ -0.81
C9orf3-201ENST00000277198 ASCL2Q99929 193 aa9.99□□□□□ -0.81
C9orf3-201ENST00000277198 SLC50A1Q9BRV3 221 aa9.99□□□□□ -0.81
C9orf3-201ENST00000277198 LINC01546A6NGU7 62 aa9.98□□□□□ -0.81
C9orf3-201ENST00000277198 SLC25A16P16260 332 aa9.98□□□□□ -0.81
C9orf3-201ENST00000277198 UBE2E1P51965 193 aa9.98□□□□□ -0.81
C9orf3-201ENST00000277198 DSCR9P59020 149 aa9.98□□□□□ -0.81
C9orf3-201ENST00000277198 LOXL1Q08397 574 aaPredicted RBP9.98□□□□□ -0.81
C9orf3-201ENST00000277198 PIMREGQ9BSJ6 248 aa9.98□□□□□ -0.81
C9orf3-201ENST00000277198 TMSB15BA0A087X1C1 80 aa9.97□□□□□ -0.81
C9orf3-201ENST00000277198 A0A1W2PRD5 423 aa9.97□□□□□ -0.81
C9orf3-201ENST00000277198 A0A1W2PRF3 423 aa9.97□□□□□ -0.81
C9orf3-201ENST00000277198 A0A1W2PRM7 423 aa9.97□□□□□ -0.81
C9orf3-201ENST00000277198 TAX1BP3O14907 124 aa9.97□□□□□ -0.81
C9orf3-201ENST00000277198 BUB3O43684 328 aa9.97□□□□□ -0.81
C9orf3-201ENST00000277198 IGHV4-31P0DP07 118 aa9.97□□□□□ -0.81
C9orf3-201ENST00000277198 CKS2P33552 79 aa9.97□□□□□ -0.81
C9orf3-201ENST00000277198 TWIST1Q15672 202 aa9.97□□□□□ -0.81
C9orf3-201ENST00000277198 ATP6V0BQ99437 205 aa9.97□□□□□ -0.81
C9orf3-201ENST00000277198 VGLL1Q99990 258 aa9.97□□□□□ -0.81
C9orf3-201ENST00000277198 H0Y8G0 127 aa9.97□□□□□ -0.81
C9orf3-201ENST00000277198 SEC11AP67812 179 aa9.97□□□□□ -0.81
C9orf3-201ENST00000277198 MRPL53Q96EL3 112 aaKnown RBP9.97□□□□□ -0.81
C9orf3-201ENST00000277198 YAE1D1Q9NRH1 226 aa9.97□□□□□ -0.81
C9orf3-201ENST00000277198 HIF1ANQ9NWT6 349 aa9.97□□□□□ -0.81
C9orf3-201ENST00000277198 SIVA1O15304 175 aa9.96□□□□□ -0.81
C9orf3-201ENST00000277198 ZFP36P26651 326 aaKnown RBP9.96□□□□□ -0.81
C9orf3-201ENST00000277198 ZNF80P51504 273 aaPredicted RBP9.96□□□□□ -0.81
C9orf3-201ENST00000277198 C15orf32Q32M92 178 aa9.96□□□□□ -0.81
C9orf3-201ENST00000277198 PRIMA1Q86XR5 153 aa9.96□□□□□ -0.81
C9orf3-201ENST00000277198 ZFAND3Q9H8U3 227 aa9.96□□□□□ -0.81
C9orf3-201ENST00000277198 LOC389332A0A1B0GUA5 103 aa9.95□□□□□ -0.82
C9orf3-201ENST00000277198 NCR2O95944 276 aa9.95□□□□□ -0.82
C9orf3-201ENST00000277198 IGHV3-23P01764 117 aa9.95□□□□□ -0.82
C9orf3-201ENST00000277198 VAMP3Q15836 100 aa9.95□□□□□ -0.82
C9orf3-201ENST00000277198 FAM106AQ4KMX7 169 aa9.95□□□□□ -0.82
C9orf3-201ENST00000277198 ZNF575Q86XF7 245 aa9.95□□□□□ -0.82
C9orf3-201ENST00000277198 PIFOQ8TCI5 191 aa9.95□□□□□ -0.82
C9orf3-201ENST00000277198 MCRIP2Q9BUT9 160 aaKnown RBP9.95□□□□□ -0.82
C9orf3-201ENST00000277198 TIMM8BQ9Y5J9 83 aaPredicted RBP9.95□□□□□ -0.82
C9orf3-201ENST00000277198 MUC21A0A0G2JKD1 596 aa9.95□□□□□ -0.82
C9orf3-201ENST00000277198 MUC21A0A140T8X8 626 aa9.95□□□□□ -0.82
C9orf3-201ENST00000277198 NDUFS8O00217 210 aa9.95□□□□□ -0.82
C9orf3-201ENST00000277198 MUC21Q5SSG8 566 aa9.95□□□□□ -0.82
C9orf3-201ENST00000277198 C2orf91Q6ZV80 131 aa9.95□□□□□ -0.82
C9orf3-201ENST00000277198 OR4C5Q8NGB2 326 aa9.95□□□□□ -0.82
C9orf3-201ENST00000277198 OR8A1Q8NGG7 326 aa9.95□□□□□ -0.82
C9orf3-201ENST00000277198 OR9G4Q8NGQ1 327 aa9.95□□□□□ -0.82
C9orf3-201ENST00000277198 Q8TAT8 98 aa9.95□□□□□ -0.82
C9orf3-201ENST00000277198 IFI27L1Q96BM0 104 aa9.95□□□□□ -0.82
C9orf3-201ENST00000277198 MAP1LC3AQ9H492 121 aa9.95□□□□□ -0.82
C9orf3-201ENST00000277198 NXT2Q9NPJ8 142 aaKnown RBP9.95□□□□□ -0.82
C9orf3-201ENST00000277198 FBN1P35555 2871 aaKnown RBP9.95□□□□□ -0.82
C9orf3-201ENST00000277198 TRBV7-1A0A0A6YYK4 115 aa9.94□□□□□ -0.82
C9orf3-201ENST00000277198 NPYP01303 97 aa9.94□□□□□ -0.82
C9orf3-201ENST00000277198 ORM1P02763 201 aa9.94□□□□□ -0.82
C9orf3-201ENST00000277198 CLEC3BP05452 202 aa9.94□□□□□ -0.82
C9orf3-201ENST00000277198 FGF6P10767 208 aa9.94□□□□□ -0.82
C9orf3-201ENST00000277198 Q6ZVH6 145 aa9.94□□□□□ -0.82
C9orf3-201ENST00000277198 IL17RELQ6ZVW7 336 aa9.94□□□□□ -0.82
C9orf3-201ENST00000277198 BOD1L2Q8IYS8 172 aa9.94□□□□□ -0.82
C9orf3-201ENST00000277198 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.94□□□□□ -0.822e-6■□□□□ 8.2
C9orf3-201ENST00000277198 ATRQ13535 2644 aa9.94□□□□□ -0.82
C9orf3-201ENST00000277198 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.94□□□□□ -0.82
C9orf3-201ENST00000277198 EEF1AKMT3Q96AZ1 226 aa9.94□□□□□ -0.82
C9orf3-201ENST00000277198 RNF185Q96GF1 192 aa9.94□□□□□ -0.82
C9orf3-201ENST00000277198 AJUBAQ96IF1 538 aa9.94□□□□□ -0.82
C9orf3-201ENST00000277198 MXRA5Q9NR99 2828 aa9.93□□□□□ -0.82
C9orf3-201ENST00000277198 TMEM97Q5BJF2 176 aa9.93□□□□□ -0.82
C9orf3-201ENST00000277198 PIP4P2Q8N4L2 257 aa9.93□□□□□ -0.82
C9orf3-201ENST00000277198 PEF1Q9UBV8 284 aaKnown RBP9.93□□□□□ -0.82
C9orf3-201ENST00000277198 TP73-AS1Q9UF72 201 aa9.93□□□□□ -0.82
C9orf3-201ENST00000277198 CLPSL1A2RUU4 121 aa9.92□□□□□ -0.82
C9orf3-201ENST00000277198 ATP6V0E1O15342 81 aa9.92□□□□□ -0.82
C9orf3-201ENST00000277198 CACNG7P62955 275 aa9.92□□□□□ -0.82
C9orf3-201ENST00000277198 PRSS47A8MTI9 375 aa9.92□□□□□ -0.82
C9orf3-201ENST00000277198 CRLF1O75462 422 aa9.92□□□□□ -0.82
C9orf3-201ENST00000277198 HLA-DMBP28068 263 aa9.92□□□□□ -0.82
C9orf3-201ENST00000277198 FCER1GP30273 86 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms