RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 GFRA4Q9GZZ7 299 aa10.78□□□□□ -0.68
NPC1-201ENST00000269228 LINC01549A6NIU2 74 aa10.77□□□□□ -0.68
NPC1-201ENST00000269228 DSCAMO60469 2012 aa10.77□□□□□ -0.68
NPC1-201ENST00000269228 F6UB75 175 aa10.77□□□□□ -0.69
NPC1-201ENST00000269228 SLURP1P55000 103 aa10.77□□□□□ -0.69
NPC1-201ENST00000269228 FOXE3Q13461 319 aa10.77□□□□□ -0.69
NPC1-201ENST00000269228 TRAV9-2A0A087WT02 112 aa10.77□□□□□ -0.69
NPC1-201ENST00000269228 F5H768 121 aa10.77□□□□□ -0.69
NPC1-201ENST00000269228 DAD1P61803 113 aa10.77□□□□□ -0.69
NPC1-201ENST00000269228 C5orf56Q8N8D9 126 aa10.77□□□□□ -0.69
NPC1-201ENST00000269228 OR2K2Q8NGT1 345 aa10.77□□□□□ -0.69
NPC1-201ENST00000269228 SIRPDQ9H106 197 aa10.77□□□□□ -0.69
NPC1-201ENST00000269228 TNRC6AQ8NDV7 1962 aaKnown RBP10.77□□□□□ -0.69
NPC1-201ENST00000269228 K7EIM0 57 aa10.76□□□□□ -0.69
NPC1-201ENST00000269228 TMEM158Q8WZ71 300 aa10.76□□□□□ -0.69
NPC1-201ENST00000269228 SCGB1A1P11684 91 aa10.76□□□□□ -0.69
NPC1-201ENST00000269228 GAGE12BA1L429 117 aa10.76□□□□□ -0.69
NPC1-201ENST00000269228 GAGE7O76087 117 aa10.76□□□□□ -0.69
NPC1-201ENST00000269228 GAGE12FP0CL80 117 aa10.76□□□□□ -0.69
NPC1-201ENST00000269228 GAGE12GP0CL81 117 aa10.76□□□□□ -0.69
NPC1-201ENST00000269228 GAGE12IP0CL82 117 aa10.76□□□□□ -0.69
NPC1-201ENST00000269228 ZNF843Q8N446 348 aa10.76□□□□□ -0.69
NPC1-201ENST00000269228 TRBV7-9A0A0J9YWB2 115 aa10.76□□□□□ -0.69
NPC1-201ENST00000269228 C5orf30Q96GV9 206 aa10.76□□□□□ -0.69
NPC1-201ENST00000269228 AJUBAQ96IF1 538 aa10.76□□□□□ -0.69
NPC1-201ENST00000269228 C11orf68Q9H3H3 251 aaKnown RBP10.76□□□□□ -0.69
NPC1-201ENST00000269228 IGLV11-55A0A075B6I3 123 aa10.75□□□□□ -0.69
NPC1-201ENST00000269228 I3L2K1 104 aa10.75□□□□□ -0.69
NPC1-201ENST00000269228 TEX43Q6ZNM6 134 aa10.75□□□□□ -0.69
NPC1-201ENST00000269228 BCL6BQ8N143 479 aaPredicted RBP10.75□□□□□ -0.69
NPC1-201ENST00000269228 ANKRD11Q6UB99 2663 aaPredicted RBP10.75□□□□□ -0.69
NPC1-201ENST00000269228 ZNF815PA8K554 130 aa10.75□□□□□ -0.69
NPC1-201ENST00000269228 EREGO14944 169 aa10.75□□□□□ -0.69
NPC1-201ENST00000269228 ODF3L1Q8IXM7 274 aa10.75□□□□□ -0.69
NPC1-201ENST00000269228 LMO4P61968 165 aa10.75□□□□□ -0.69
NPC1-201ENST00000269228 SPTBN4Q9H254 2564 aa10.75□□□□□ -0.69
NPC1-201ENST00000269228 NAV3Q8IVL0 2385 aa10.75□□□□□ -0.69
NPC1-201ENST00000269228 CHD3Q12873 2000 aaKnown RBP10.75□□□□□ -0.69
NPC1-201ENST00000269228 GAGE12JA6NER3 117 aa10.75□□□□□ -0.69
NPC1-201ENST00000269228 TNFRSF6BO95407 300 aa10.75□□□□□ -0.69
NPC1-201ENST00000269228 APOC4P55056 127 aa10.75□□□□□ -0.69
NPC1-201ENST00000269228 GAGE1Q13065 139 aa10.75□□□□□ -0.69
NPC1-201ENST00000269228 GAGE4Q13068 117 aa10.75□□□□□ -0.69
NPC1-201ENST00000269228 GAGE5Q13069 117 aa10.75□□□□□ -0.69
NPC1-201ENST00000269228 GAGE13Q4V321 117 aa10.75□□□□□ -0.69
NPC1-201ENST00000269228 ASPHD1Q5U4P2 390 aa10.75□□□□□ -0.69
NPC1-201ENST00000269228 AZU1P20160 251 aa10.74□□□□□ -0.69
NPC1-201ENST00000269228 ZNF114Q8NC26 417 aa10.74□□□□□ -0.69
NPC1-201ENST00000269228 RHODO00212 210 aa10.74□□□□□ -0.69
NPC1-201ENST00000269228 IGKV1-17P01599 117 aa10.74□□□□□ -0.69
NPC1-201ENST00000269228 ZNF664Q8N3J9 261 aa10.74□□□□□ -0.69
NPC1-201ENST00000269228 ZC2HC1AQ96GY0 325 aa10.74□□□□□ -0.69
NPC1-201ENST00000269228 TRAV13-1A0A0B4J241 112 aa10.74□□□□□ -0.69
NPC1-201ENST00000269228 PRSS46E5RG02 174 aa10.74□□□□□ -0.69
NPC1-201ENST00000269228 TRAV2A0A0B4J234 112 aa10.73□□□□□ -0.69
NPC1-201ENST00000269228 H3BUT2 72 aa10.73□□□□□ -0.69
NPC1-201ENST00000269228 IGLV2-23P01705 113 aa10.73□□□□□ -0.69
NPC1-201ENST00000269228 ATP6V0BQ99437 205 aa10.73□□□□□ -0.69
NPC1-201ENST00000269228 SPCS1Q9Y6A9 102 aa10.73□□□□□ -0.69
NPC1-201ENST00000269228 FAM231BA6NCW3 169 aa10.73□□□□□ -0.69
NPC1-201ENST00000269228 CTSGP08311 255 aa10.73□□□□□ -0.69
NPC1-201ENST00000269228 CT83Q5H943 113 aa10.73□□□□□ -0.69
NPC1-201ENST00000269228 TRPT1Q86TN4 253 aaKnown RBP10.73□□□□□ -0.69
NPC1-201ENST00000269228 TNCP24821 2201 aa10.73□□□□□ -0.69
NPC1-201ENST00000269228 VWC2Q2TAL6 325 aa10.73□□□□□ -0.69
NPC1-201ENST00000269228 CKS1BP61024 79 aa10.72□□□□□ -0.69
NPC1-201ENST00000269228 DYNAPQ8N1N2 210 aa10.72□□□□□ -0.69
NPC1-201ENST00000269228 IGLV2-14P01704 120 aa10.72□□□□□ -0.69
NPC1-201ENST00000269228 LINC00158P58513 81 aa10.72□□□□□ -0.69
NPC1-201ENST00000269228 HIST2H2BCQ6DN03 193 aa10.72□□□□□ -0.69
NPC1-201ENST00000269228 AGPAT4-IT1Q9H0P7 198 aa10.72□□□□□ -0.69
NPC1-201ENST00000269228 LINC01559Q495D7 138 aa10.71□□□□□ -0.69
NPC1-201ENST00000269228 FAM104BQ5XKR9 115 aa10.71□□□□□ -0.69
NPC1-201ENST00000269228 LOXL1Q08397 574 aaPredicted RBP10.71□□□□□ -0.69
NPC1-201ENST00000269228 A8MWV9 139 aa10.71□□□□□ -0.69
NPC1-201ENST00000269228 SFTA2Q6UW10 78 aa10.71□□□□□ -0.69
NPC1-201ENST00000269228 FOXI2Q6ZQN5 318 aa10.71□□□□□ -0.69
NPC1-201ENST00000269228 A0A1B0GWB2 263 aa10.71□□□□□ -0.7
NPC1-201ENST00000269228 C11orf52Q96A22 123 aa10.71□□□□□ -0.7
NPC1-201ENST00000269228 V9GYV3 84 aa10.71□□□□□ -0.7
NPC1-201ENST00000269228 TEX22C9J3V5 150 aa10.71□□□□□ -0.7
NPC1-201ENST00000269228 E7EUB6 86 aa10.71□□□□□ -0.7
NPC1-201ENST00000269228 PLNP26678 52 aa10.71□□□□□ -0.7
NPC1-201ENST00000269228 FAM231DQ6ZW35 169 aa10.71□□□□□ -0.7
NPC1-201ENST00000269228 NHP2Q9NX24 153 aaKnown RBP10.71□□□□□ -0.7
NPC1-201ENST00000269228 RBMY1BA6NDE4 496 aaKnown RBP10.7□□□□□ -0.7
NPC1-201ENST00000269228 RBMY1EA6NEQ0 496 aaKnown RBP10.7□□□□□ -0.7
NPC1-201ENST00000269228 PSCAO43653 123 aa10.7□□□□□ -0.7
NPC1-201ENST00000269228 RBMY1DP0C7P1 496 aaKnown RBP10.7□□□□□ -0.7
NPC1-201ENST00000269228 RBMY1A1P0DJD3 496 aaKnown RBP10.7□□□□□ -0.7
NPC1-201ENST00000269228 RBMY1CP0DJD4 496 aa10.7□□□□□ -0.7
NPC1-201ENST00000269228 APRG1Q8IVJ8 170 aa10.7□□□□□ -0.7
NPC1-201ENST00000269228 WFDC11Q8NEX6 87 aa10.7□□□□□ -0.7
NPC1-201ENST00000269228 MYO9AB2RTY4 2548 aa10.7□□□□□ -0.7
NPC1-201ENST00000269228 IGHV4OR15-8A0A075B7B6 117 aa10.7□□□□□ -0.7
NPC1-201ENST00000269228 A0A087WW49 117 aa10.7□□□□□ -0.7
NPC1-201ENST00000269228 TRAV26-2A0A0B4J265 109 aa10.7□□□□□ -0.7
NPC1-201ENST00000269228 C3orf79P0CE67 100 aa10.7□□□□□ -0.7
NPC1-201ENST00000269228 KMT2EQ8IZD2 1858 aa10.69□□□□□ -0.7
NPC1-201ENST00000269228 A0A1B0GUS0 222 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms