RNA–Protein interactions for RNA: ENST00000268049.11

USP3-201, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 5,311 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-201ENST00000268049 FXYD7P58549 80 aa6.26□□□□□ -1.41
USP3-201ENST00000268049 MRPL23Q16540 153 aaKnown RBP6.26□□□□□ -1.41
USP3-201ENST00000268049 C5orf47Q569G3 176 aa6.26□□□□□ -1.41
USP3-201ENST00000268049 FAM89BQ8N5H3 189 aa6.26□□□□□ -1.41
USP3-201ENST00000268049 ANKRD29Q8N6D5 301 aa6.26□□□□□ -1.41
USP3-201ENST00000268049 FBLN5Q9UBX5 448 aa6.26□□□□□ -1.41
USP3-201ENST00000268049 PLXNB3Q9ULL4 1909 aa6.26□□□□□ -1.41
USP3-201ENST00000268049 IGHV3OR16-8A0A075B7F1 116 aa6.26□□□□□ -1.41
USP3-201ENST00000268049 IGHV1-24A0A0C4DH33 117 aa6.26□□□□□ -1.41
USP3-201ENST00000268049 PYYP10082 97 aa6.26□□□□□ -1.41
USP3-201ENST00000268049 ZNF138P52744 262 aa6.26□□□□□ -1.41
USP3-201ENST00000268049 NFE4Q86UQ8 179 aa6.26□□□□□ -1.41
USP3-201ENST00000268049 DEFB125Q8N687 156 aa6.26□□□□□ -1.41
USP3-201ENST00000268049 C18orf32Q8TCD1 76 aa6.26□□□□□ -1.41
USP3-201ENST00000268049 A0A0U1RRA0 63 aa6.26□□□□□ -1.41
USP3-201ENST00000268049 IGHV3-53P01767 116 aa6.26□□□□□ -1.41
USP3-201ENST00000268049 PSG8Q9UQ74 426 aa6.26□□□□□ -1.41
USP3-201ENST00000268049 F2Z2F3 143 aa6.26□□□□□ -1.41
USP3-201ENST00000268049 CCL1P22362 96 aa6.26□□□□□ -1.41
USP3-201ENST00000268049 C11orf45Q8TAV5 145 aa6.26□□□□□ -1.41
USP3-201ENST00000268049 CFHR4Q92496 578 aa6.26□□□□□ -1.41
USP3-201ENST00000268049 ZNF625Q96I27 306 aaPredicted RBP6.26□□□□□ -1.41
USP3-201ENST00000268049 RBMY1FQ15415 496 aaKnown RBP6.25□□□□□ -1.41
USP3-201ENST00000268049 C4orf3Q8WVX3 66 aa6.25□□□□□ -1.41
USP3-201ENST00000268049 LAMTOR3Q9UHA4 124 aa6.25□□□□□ -1.41
USP3-201ENST00000268049 IGKV2D-24A0A075B6R9 120 aa6.25□□□□□ -1.41
USP3-201ENST00000268049 PRR32B1ATL7 298 aa6.25□□□□□ -1.41
USP3-201ENST00000268049 CD28P10747 220 aa6.25□□□□□ -1.41
USP3-201ENST00000268049 ODF3L1Q8IXM7 274 aa6.25□□□□□ -1.41
USP3-201ENST00000268049 KAAG1Q9UBP8 84 aa6.25□□□□□ -1.41
USP3-201ENST00000268049 MUC22E2RYF6 1773 aaPredicted RBP6.25□□□□□ -1.41
USP3-201ENST00000268049 FER1L5A0AVI2 2057 aa6.25□□□□□ -1.41
USP3-201ENST00000268049 SOCS3O14543 225 aa6.25□□□□□ -1.41
USP3-201ENST00000268049 SPRY2O43597 315 aa6.25□□□□□ -1.41
USP3-201ENST00000268049 TMEM131Q92545 1883 aa6.25□□□□□ -1.41
USP3-201ENST00000268049 NUPR2A6NF83 97 aa6.25□□□□□ -1.41
USP3-201ENST00000268049 LY6G6CO95867 125 aa6.25□□□□□ -1.41
USP3-201ENST00000268049 HOXB4P17483 251 aaPredicted RBP6.25□□□□□ -1.41
USP3-201ENST00000268049 DUX4L9Q6RFH8 374 aaPredicted RBP6.25□□□□□ -1.41
USP3-201ENST00000268049 AMTNQ6UX39 209 aa6.25□□□□□ -1.41
USP3-201ENST00000268049 AMN1Q8IY45 258 aa6.25□□□□□ -1.41
USP3-201ENST00000268049 GFI1Q99684 422 aa6.25□□□□□ -1.41
USP3-201ENST00000268049 SPXQ9BT56 116 aa6.25□□□□□ -1.41
USP3-201ENST00000268049 NHLRC4P0CG21 123 aaPredicted RBP6.24□□□□□ -1.41
USP3-201ENST00000268049 TEX36Q5VZQ5 186 aa6.24□□□□□ -1.41
USP3-201ENST00000268049 OR11H6Q8NGC7 330 aa6.24□□□□□ -1.41
USP3-201ENST00000268049 ERCC8Q13216 396 aa6.24□□□□□ -1.41
USP3-201ENST00000268049 TRBV25-1A0A075B6N4 114 aa6.24□□□□□ -1.41
USP3-201ENST00000268049 IGLV1-44P01699 117 aa6.24□□□□□ -1.41
USP3-201ENST00000268049 LHFPL1Q86WI0 220 aa6.24□□□□□ -1.41
USP3-201ENST00000268049 IGKV1D-13A0A0B4J2D9 117 aa6.24□□□□□ -1.41
USP3-201ENST00000268049 IGKV1-13P0DP09 117 aa6.24□□□□□ -1.41
USP3-201ENST00000268049 YPEL3P61236 119 aaPredicted RBP6.24□□□□□ -1.41
USP3-201ENST00000268049 ZNF319Q9P2F9 582 aa6.24□□□□□ -1.41
USP3-201ENST00000268049 H0YJW9 148 aa6.23□□□□□ -1.41
USP3-201ENST00000268049 CEND1Q8N111 149 aa6.23□□□□□ -1.41
USP3-201ENST00000268049 WIPF2Q8TF74 440 aaPredicted RBP6.23□□□□□ -1.41
USP3-201ENST00000268049 MED13Q9UHV7 2174 aa6.23□□□□□ -1.41
USP3-201ENST00000268049 IGLV3-9A0A075B6K5 115 aa6.23□□□□□ -1.41
USP3-201ENST00000268049 K7ERJ3 54 aa6.23□□□□□ -1.41
USP3-201ENST00000268049 SIVA1O15304 175 aa6.23□□□□□ -1.41
USP3-201ENST00000268049 TAL2Q16559 108 aa6.23□□□□□ -1.41
USP3-201ENST00000268049 JPT2Q9H910 190 aa6.23□□□□□ -1.41
USP3-201ENST00000268049 PNRC2Q9NPJ4 139 aaKnown RBP6.23□□□□□ -1.41
USP3-201ENST00000268049 TRAV13-1A0A0B4J241 112 aa6.23□□□□□ -1.41
USP3-201ENST00000268049 SRRM4A7MD48 611 aaKnown RBP6.23□□□□□ -1.41
USP3-201ENST00000268049 J3QRE1 110 aa6.23□□□□□ -1.41
USP3-201ENST00000268049 FREM3P0C091 2139 aa6.23□□□□□ -1.41
USP3-201ENST00000268049 HOXD3P31249 432 aaPredicted RBP6.23□□□□□ -1.41
USP3-201ENST00000268049 PAX9P55771 341 aa6.23□□□□□ -1.41
USP3-201ENST00000268049 ZNF493Q6ZR52 646 aa6.23□□□□□ -1.41
USP3-201ENST00000268049 NEGR1Q7Z3B1 354 aa6.23□□□□□ -1.41
USP3-201ENST00000268049 CD177Q8N6Q3 437 aa6.23□□□□□ -1.41
USP3-201ENST00000268049 RNF152Q8N8N0 203 aa6.23□□□□□ -1.41
USP3-201ENST00000268049 LYZL4Q96KX0 146 aa6.23□□□□□ -1.41
USP3-201ENST00000268049 G3V4G9 280 aa6.23□□□□□ -1.41
USP3-201ENST00000268049 IGHG4P01861 327 aa6.23□□□□□ -1.41
USP3-201ENST00000268049 FOXL2NBQ6ZUU3 175 aa6.23□□□□□ -1.41
USP3-201ENST00000268049 NTN5Q8WTR8 489 aaPredicted RBP6.23□□□□□ -1.41
USP3-201ENST00000268049 UBL5Q9BZL1 73 aa6.23□□□□□ -1.41
USP3-201ENST00000268049 GTF3C1Q12789 2109 aa6.22□□□□□ -1.41
USP3-201ENST00000268049 PRSS29PA6NIE9 313 aa6.22□□□□□ -1.41
USP3-201ENST00000268049 FGF6P10767 208 aa6.22□□□□□ -1.41
USP3-201ENST00000268049 LINC00158P58513 81 aa6.22□□□□□ -1.41
USP3-201ENST00000268049 ANKRD39Q53RE8 183 aa6.22□□□□□ -1.41
USP3-201ENST00000268049 LYZL1Q6UWQ5 148 aa6.22□□□□□ -1.41
USP3-201ENST00000268049 HS3ST6Q96QI5 342 aa6.22□□□□□ -1.41
USP3-201ENST00000268049 C7orf33Q8WU49 177 aa6.22□□□□□ -1.41
USP3-201ENST00000268049 C16orf74Q96GX8 76 aa6.22□□□□□ -1.41
USP3-201ENST00000268049 IGF2BP2-AS1Q96M15 143 aa6.22□□□□□ -1.41
USP3-201ENST00000268049 SLC25A39Q9BZJ4 359 aaPredicted RBP6.22□□□□□ -1.41
USP3-201ENST00000268049 V9GYY9 64 aa6.22□□□□□ -1.41
USP3-201ENST00000268049 PCDH15Q96QU1 1955 aa6.22□□□□□ -1.41
USP3-201ENST00000268049 IGKV1OR2-108A0A075B7D4 117 aa6.22□□□□□ -1.41
USP3-201ENST00000268049 TRAV3A0A0B4J244 114 aa6.22□□□□□ -1.41
USP3-201ENST00000268049 RHOHQ15669 191 aa6.22□□□□□ -1.41
USP3-201ENST00000268049 DOCK7Q96N67 2140 aa6.22□□□□□ -1.41
USP3-201ENST00000268049 MORN5Q5VZ52 161 aa6.22□□□□□ -1.41
USP3-201ENST00000268049 LINC00311Q8N616 119 aa6.22□□□□□ -1.41
USP3-201ENST00000268049 RNF138Q8WVD3 245 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms