RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 AAMDCQ9H7C9 122 aa6.75□□□□□ -1.33
VPS41-201ENST00000265745 Q9H8V8 135 aa6.75□□□□□ -1.33
VPS41-201ENST00000265745 FAM30AQ9NZY2 134 aa6.75□□□□□ -1.33
VPS41-201ENST00000265745 PCLOQ9Y6V0 5065 aa6.75□□□□□ -1.33
VPS41-201ENST00000265745 PKD1P98161 4303 aa6.74□□□□□ -1.33
VPS41-201ENST00000265745 IGKV2-40A0A087WW87 121 aaPredicted RBP6.74□□□□□ -1.33
VPS41-201ENST00000265745 IGKV2D-40P01614 121 aaPredicted RBP6.74□□□□□ -1.33
VPS41-201ENST00000265745 GPX1P07203 203 aa6.74□□□□□ -1.33
VPS41-201ENST00000265745 BTN1A1Q13410 526 aa6.74□□□□□ -1.33
VPS41-201ENST00000265745 ESRGQ1W209 222 aa6.74□□□□□ -1.33
VPS41-201ENST00000265745 FAM122CQ6P4D5 195 aa6.74□□□□□ -1.33
VPS41-201ENST00000265745 ZNF575Q86XF7 245 aa6.74□□□□□ -1.33
VPS41-201ENST00000265745 EIF4E3Q8N5X7 224 aaKnown RBP6.74□□□□□ -1.33
VPS41-201ENST00000265745 ZNF680Q8NEM1 530 aa6.74□□□□□ -1.33
VPS41-201ENST00000265745 FXYD5Q96DB9 178 aa6.74□□□□□ -1.33
VPS41-201ENST00000265745 MARVELD1Q9BSK0 173 aa6.74□□□□□ -1.33
VPS41-201ENST00000265745 PAXXQ9BUH6 204 aa6.74□□□□□ -1.33
VPS41-201ENST00000265745 TMPRSS5Q9H3S3 457 aa6.74□□□□□ -1.33
VPS41-201ENST00000265745 KCNIP2Q9NS61 270 aa6.74□□□□□ -1.33
VPS41-201ENST00000265745 ZNF492Q9P255 531 aa6.74□□□□□ -1.33
VPS41-201ENST00000265745 TRGV2A0A075B6R0 118 aa6.73□□□□□ -1.33
VPS41-201ENST00000265745 OR10J4P0C629 311 aa6.73□□□□□ -1.33
VPS41-201ENST00000265745 TMEM78Q5T7P6 136 aa6.73□□□□□ -1.33
VPS41-201ENST00000265745 Q6ZQT7 251 aa6.73□□□□□ -1.33
VPS41-201ENST00000265745 PPP1R1CQ8WVI7 109 aa6.73□□□□□ -1.33
VPS41-201ENST00000265745 VSIG2Q96IQ7 327 aa6.73□□□□□ -1.33
VPS41-201ENST00000265745 UPK3BQ9BT76 320 aa6.73□□□□□ -1.33
VPS41-201ENST00000265745 MRPL32Q9BYC8 188 aaKnown RBP6.73□□□□□ -1.33
VPS41-201ENST00000265745 FUT9Q9Y231 359 aa6.73□□□□□ -1.33
VPS41-201ENST00000265745 KLF12Q9Y4X4 402 aa6.73□□□□□ -1.33
VPS41-201ENST00000265745 TRGV1A0A0A0MS02 117 aa6.72□□□□□ -1.33
VPS41-201ENST00000265745 TRBV7-9A0A0J9YWB2 115 aa6.72□□□□□ -1.33
VPS41-201ENST00000265745 C17orf112F2Z3M2 114 aa6.72□□□□□ -1.33
VPS41-201ENST00000265745 SPINK4O60575 86 aa6.72□□□□□ -1.33
VPS41-201ENST00000265745 ZNF138P52744 262 aa6.72□□□□□ -1.33
VPS41-201ENST00000265745 TCL1AP56279 114 aa6.72□□□□□ -1.33
VPS41-201ENST00000265745 RANP62826 216 aaKnown RBP6.72□□□□□ -1.33
VPS41-201ENST00000265745 PRR9Q5T870 116 aa6.72□□□□□ -1.33
VPS41-201ENST00000265745 LYPD1Q8N2G4 141 aa6.72□□□□□ -1.33
VPS41-201ENST00000265745 PHYHIPLQ96FC7 376 aa6.72□□□□□ -1.33
VPS41-201ENST00000265745 ATP5SQ99766 215 aa6.72□□□□□ -1.33
VPS41-201ENST00000265745 KRTAP1-5Q9BYS1 174 aa6.72□□□□□ -1.33
VPS41-201ENST00000265745 PTTG2Q9NZH5 202 aa6.72□□□□□ -1.33
VPS41-201ENST00000265745 TP53TG3Q9ULZ0 132 aa6.72□□□□□ -1.33
VPS41-201ENST00000265745 IGHV1OR15-1A0A075B7D0 117 aa6.71□□□□□ -1.34
VPS41-201ENST00000265745 A0A096LPF7 62 aa6.71□□□□□ -1.34
VPS41-201ENST00000265745 SSNA1O43805 119 aa6.71□□□□□ -1.34
VPS41-201ENST00000265745 OR7C2O60412 319 aa6.71□□□□□ -1.34
VPS41-201ENST00000265745 MPC2O95563 127 aa6.71□□□□□ -1.34
VPS41-201ENST00000265745 IBA57Q5T440 356 aaKnown RBP6.71□□□□□ -1.34
VPS41-201ENST00000265745 Q9H3A6 140 aa6.71□□□□□ -1.34
VPS41-201ENST00000265745 MRPS16Q9Y3D3 137 aaKnown RBP6.71□□□□□ -1.34
VPS41-201ENST00000265745 HSPB11Q9Y547 144 aa6.71□□□□□ -1.34
VPS41-201ENST00000265745 A0A1W2PPQ1 181 aa6.7□□□□□ -1.34
VPS41-201ENST00000265745 RBAKDNA6NC62 111 aa6.7□□□□□ -1.34
VPS41-201ENST00000265745 IFNA5P01569 189 aa6.7□□□□□ -1.34
VPS41-201ENST00000265745 PET100P0DJ07 73 aa6.7□□□□□ -1.34
VPS41-201ENST00000265745 RPL12P30050 165 aaKnown RBP6.7□□□□□ -1.34
VPS41-201ENST00000265745 CSN1S1P47710 185 aa6.7□□□□□ -1.34
VPS41-201ENST00000265745 ZNF266Q14584 549 aa6.7□□□□□ -1.34
VPS41-201ENST00000265745 TTC32Q5I0X7 151 aa6.7□□□□□ -1.34
VPS41-201ENST00000265745 FFAR4Q5NUL3 377 aa6.7□□□□□ -1.34
VPS41-201ENST00000265745 Q8TAT8 98 aa6.7□□□□□ -1.34
VPS41-201ENST00000265745 SCGB1C1Q8TD33 95 aa6.7□□□□□ -1.34
VPS41-201ENST00000265745 ST6GAL2Q96JF0 529 aa6.7□□□□□ -1.34
VPS41-201ENST00000265745 NACAE9PAV3 2078 aa6.7□□□□□ -1.34
VPS41-201ENST00000265745 C16orf90A8MZG2 172 aa6.69□□□□□ -1.34
VPS41-201ENST00000265745 TAS2R45P59539 299 aa6.69□□□□□ -1.34
VPS41-201ENST00000265745 DEFA1P59665 94 aa6.69□□□□□ -1.34
VPS41-201ENST00000265745 DEFA3P59666 94 aa6.69□□□□□ -1.34
VPS41-201ENST00000265745 UBE2L3P68036 154 aaKnown RBP6.69□□□□□ -1.34
VPS41-201ENST00000265745 SMIM3Q9BZL3 60 aa6.69□□□□□ -1.34
VPS41-201ENST00000265745 WFDC1Q9HC57 220 aa6.69□□□□□ -1.34
VPS41-201ENST00000265745 MDFICQ9P1T7 246 aa6.69□□□□□ -1.34
VPS41-201ENST00000265745 MBD2Q9UBB5 411 aa6.69□□□□□ -1.34
VPS41-201ENST00000265745 LENEPQ9Y5L5 61 aa6.69□□□□□ -1.34
VPS41-201ENST00000265745 RYR1P21817 5038 aa6.69□□□□□ -1.34
VPS41-201ENST00000265745 DIRC3C9JPN6 131 aa6.68□□□□□ -1.34
VPS41-201ENST00000265745 PAX4O43316 350 aa6.68□□□□□ -1.34
VPS41-201ENST00000265745 EIF3GO75821 320 aaKnown RBP eCLIP6.68□□□□□ -1.34
VPS41-201ENST00000265745 IGHV3-53P01767 116 aa6.68□□□□□ -1.34
VPS41-201ENST00000265745 SLAQ13239 276 aa6.68□□□□□ -1.34
VPS41-201ENST00000265745 FHL2Q14192 279 aa6.68□□□□□ -1.34
VPS41-201ENST00000265745 KHDC3LQ587J8 217 aa6.68□□□□□ -1.34
VPS41-201ENST00000265745 Q6AWC8 147 aa6.68□□□□□ -1.34
VPS41-201ENST00000265745 OTORQ9NRC9 128 aa6.68□□□□□ -1.34
VPS41-201ENST00000265745 MRPL16Q9NX20 251 aaKnown RBP6.68□□□□□ -1.34
VPS41-201ENST00000265745 PRO0255Q9UI72 69 aa6.68□□□□□ -1.34
VPS41-201ENST00000265745 HHLA3Q9XRX5 114 aa6.68□□□□□ -1.34
VPS41-201ENST00000265745 LRP1BQ9NZR2 4599 aa6.67□□□□□ -1.34
VPS41-201ENST00000265745 PGPA6NDG6 321 aa6.67□□□□□ -1.34
VPS41-201ENST00000265745 CRYBA4P53673 196 aa6.67□□□□□ -1.34
VPS41-201ENST00000265745 ZNF415Q09FC8 603 aa6.67□□□□□ -1.34
VPS41-201ENST00000265745 MUC21Q5SSG8 566 aa6.67□□□□□ -1.34
VPS41-201ENST00000265745 TMED6Q8WW62 240 aa6.67□□□□□ -1.34
VPS41-201ENST00000265745 RASL10AQ92737 203 aa6.67□□□□□ -1.34
VPS41-201ENST00000265745 HYLS1Q96M11 299 aa6.67□□□□□ -1.34
VPS41-201ENST00000265745 KRTAP4-5Q9BYR2 181 aa6.67□□□□□ -1.34
VPS41-201ENST00000265745 ICOSQ9Y6W8 199 aa6.67□□□□□ -1.34
VPS41-201ENST00000265745 SIVA1O15304 175 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms