RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 CGB3P0DN86 165 aa14.28□□□□□ -0.12
COL5A3-201ENST00000264828 HLA-DMBP28068 263 aa14.28□□□□□ -0.12
COL5A3-201ENST00000264828 ZNF134P52741 427 aa14.28□□□□□ -0.12
COL5A3-201ENST00000264828 TMEM14CQ9P0S9 112 aa14.28□□□□□ -0.12
COL5A3-201ENST00000264828 IGF2BP2-AS1Q96M15 143 aa14.28□□□□□ -0.12
COL5A3-201ENST00000264828 Q6ZVH6 145 aa14.28□□□□□ -0.12
COL5A3-201ENST00000264828 Q8TCH9 128 aa14.28□□□□□ -0.12
COL5A3-201ENST00000264828 FANCMQ8IYD8 2048 aa14.28□□□□□ -0.12
COL5A3-201ENST00000264828 F8VRH5 84 aa14.27□□□□□ -0.12
COL5A3-201ENST00000264828 NDUFA4O00483 81 aa14.27□□□□□ -0.12
COL5A3-201ENST00000264828 LOXP28300 417 aaPredicted RBP14.27□□□□□ -0.12
COL5A3-201ENST00000264828 C1orf147Q96MC9 270 aaPredicted RBP14.27□□□□□ -0.12
COL5A3-201ENST00000264828 C10orf91Q5T1B1 145 aa14.27□□□□□ -0.12
COL5A3-201ENST00000264828 Q96MF0 132 aa14.27□□□□□ -0.12
COL5A3-201ENST00000264828 PLXNA4Q9HCM2 1894 aa14.27□□□□□ -0.12
COL5A3-201ENST00000264828 MED12Q93074 2177 aa14.27□□□□□ -0.12
COL5A3-201ENST00000264828 CRYGCP07315 174 aa14.27□□□□□ -0.13
COL5A3-201ENST00000264828 TAL2Q16559 108 aa14.27□□□□□ -0.13
COL5A3-201ENST00000264828 C15orf53Q8NAA6 179 aa14.27□□□□□ -0.13
COL5A3-201ENST00000264828 SPRY2O43597 315 aa14.26□□□□□ -0.13
COL5A3-201ENST00000264828 SP5Q6BEB4 398 aaPredicted RBP14.26□□□□□ -0.13
COL5A3-201ENST00000264828 VOPP1Q96AW1 172 aa14.26□□□□□ -0.13
COL5A3-201ENST00000264828 KLF2Q9Y5W3 355 aaPredicted RBP14.26□□□□□ -0.13
COL5A3-201ENST00000264828 PHF3Q92576 2039 aaKnown RBP14.26□□□□□ -0.13
COL5A3-201ENST00000264828 ANGP03950 147 aaKnown RBP14.26□□□□□ -0.13
COL5A3-201ENST00000264828 TRAV13-2A0A0B4J235 113 aa14.26□□□□□ -0.13
COL5A3-201ENST00000264828 CRYBA4P53673 196 aa14.26□□□□□ -0.13
COL5A3-201ENST00000264828 C12orf74Q32Q52 190 aa14.26□□□□□ -0.13
COL5A3-201ENST00000264828 ARTNQ5T4W7 220 aa14.26□□□□□ -0.13
COL5A3-201ENST00000264828 Q71RC1 249 aaPredicted RBP14.26□□□□□ -0.13
COL5A3-201ENST00000264828 DEFB105AQ8NG35 78 aa14.26□□□□□ -0.13
COL5A3-201ENST00000264828 KIAA2026Q5HYC2 2103 aa14.26□□□□□ -0.13
COL5A3-201ENST00000264828 KIAA1671Q9BY89 1806 aa14.25□□□□□ -0.13
COL5A3-201ENST00000264828 C15orf65H3BRN8 121 aa14.25□□□□□ -0.13
COL5A3-201ENST00000264828 CDPF1Q6NVV7 123 aa14.25□□□□□ -0.13
COL5A3-201ENST00000264828 ANKRD29Q8N6D5 301 aa14.25□□□□□ -0.13
COL5A3-201ENST00000264828 GNRH2O43555 120 aa14.25□□□□□ -0.13
COL5A3-201ENST00000264828 NTN5Q8WTR8 489 aaPredicted RBP14.25□□□□□ -0.13
COL5A3-201ENST00000264828 WDR81Q562E7 1941 aa14.25□□□□□ -0.13
COL5A3-201ENST00000264828 F6UB75 175 aa14.24□□□□□ -0.13
COL5A3-201ENST00000264828 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.24□□□□□ -0.13
COL5A3-201ENST00000264828 IGKV2-29A2NJV5 120 aaPredicted RBP14.24□□□□□ -0.13
COL5A3-201ENST00000264828 NDUFS5O43920 106 aa14.24□□□□□ -0.13
COL5A3-201ENST00000264828 HERVK_113P63121 156 aa14.24□□□□□ -0.13
COL5A3-201ENST00000264828 ZNF524Q96C55 264 aa14.24□□□□□ -0.13
COL5A3-201ENST00000264828 CFHR4Q92496 578 aa14.24□□□□□ -0.13
COL5A3-201ENST00000264828 IGFBPL1Q8WX77 278 aa14.23□□□□□ -0.13
COL5A3-201ENST00000264828 CCL25O15444 150 aa14.23□□□□□ -0.13
COL5A3-201ENST00000264828 XCL1P47992 114 aa14.23□□□□□ -0.13
COL5A3-201ENST00000264828 PLXNA2O75051 1894 aa14.23□□□□□ -0.13
COL5A3-201ENST00000264828 LTAP01374 205 aa14.23□□□□□ -0.13
COL5A3-201ENST00000264828 FOXE3Q13461 319 aa14.23□□□□□ -0.13
COL5A3-201ENST00000264828 SHISA9B4DS77 424 aa14.23□□□□□ -0.13
COL5A3-201ENST00000264828 CGB7P0DN87 165 aa14.22□□□□□ -0.13
COL5A3-201ENST00000264828 PLA2G2CQ5R387 149 aa14.22□□□□□ -0.13
COL5A3-201ENST00000264828 TCF20Q9UGU0 1960 aaKnown RBP14.22□□□□□ -0.13
COL5A3-201ENST00000264828 PROK2Q9HC23 129 aa14.22□□□□□ -0.13
COL5A3-201ENST00000264828 IGLV3-9A0A075B6K5 115 aa14.22□□□□□ -0.13
COL5A3-201ENST00000264828 IGLC1P0CG04 106 aa14.22□□□□□ -0.13
COL5A3-201ENST00000264828 IGHV4-4A0A075B6R2 117 aa14.22□□□□□ -0.13
COL5A3-201ENST00000264828 DYNAPQ8N1N2 210 aa14.22□□□□□ -0.13
COL5A3-201ENST00000264828 IGHV7-4-1A0A0J9YVY3 117 aa14.22□□□□□ -0.13
COL5A3-201ENST00000264828 SPANXA1Q9NS26 97 aa14.22□□□□□ -0.13
COL5A3-201ENST00000264828 A0A0J9YY99 117 aa14.21□□□□□ -0.13
COL5A3-201ENST00000264828 PCP2Q8IVA1 136 aa14.21□□□□□ -0.13
COL5A3-201ENST00000264828 E9PQ18 207 aa14.21□□□□□ -0.14
COL5A3-201ENST00000264828 GATA3P23771 443 aa14.21□□□□□ -0.14
COL5A3-201ENST00000264828 PYGO2Q9BRQ0 406 aa14.21□□□□□ -0.14
COL5A3-201ENST00000264828 Q6ZQT7 251 aa14.2□□□□□ -0.14
COL5A3-201ENST00000264828 MYO7BQ6PIF6 2116 aa14.2□□□□□ -0.14
COL5A3-201ENST00000264828 AKAP6Q13023 2319 aa14.2□□□□□ -0.14
COL5A3-201ENST00000264828 NOP10Q9NPE3 64 aaKnown RBP14.2□□□□□ -0.14
COL5A3-201ENST00000264828 GATA1P15976 413 aaPredicted RBP14.2□□□□□ -0.14
COL5A3-201ENST00000264828 SS18L2Q9UHA2 77 aa14.2□□□□□ -0.14
COL5A3-201ENST00000264828 SPTA1P02549 2419 aa14.2□□□□□ -0.14
COL5A3-201ENST00000264828 EGR2P11161 476 aaPredicted RBP14.2□□□□□ -0.14
COL5A3-201ENST00000264828 APOC4P55056 127 aa14.2□□□□□ -0.14
COL5A3-201ENST00000264828 MRPL53Q96EL3 112 aaKnown RBP14.19□□□□□ -0.14
COL5A3-201ENST00000264828 K7EM74 188 aa14.19□□□□□ -0.14
COL5A3-201ENST00000264828 C20orf78Q9BR46 151 aa14.19□□□□□ -0.14
COL5A3-201ENST00000264828 PRB2P02812 416 aaPredicted RBP14.19□□□□□ -0.14
COL5A3-201ENST00000264828 RBM3P98179 157 aaKnown RBP14.19□□□□□ -0.14
COL5A3-201ENST00000264828 CEP250Q9BV73 2442 aa14.19□□□□□ -0.14
COL5A3-201ENST00000264828 DOCK11Q5JSL3 2073 aa14.18□□□□□ -0.14
COL5A3-201ENST00000264828 IGLC7A0M8Q6 106 aa14.18□□□□□ -0.14
COL5A3-201ENST00000264828 SIVA1O15304 175 aa14.18□□□□□ -0.14
COL5A3-201ENST00000264828 NBL1P41271 181 aa14.18□□□□□ -0.14
COL5A3-201ENST00000264828 CR1LQ2VPA4 569 aa14.18□□□□□ -0.14
COL5A3-201ENST00000264828 C11orf52Q96A22 123 aa14.18□□□□□ -0.14
COL5A3-201ENST00000264828 Q9H8V8 135 aa14.18□□□□□ -0.14
COL5A3-201ENST00000264828 BAALC-AS2P0C853 105 aa14.18□□□□□ -0.14
COL5A3-201ENST00000264828 LINC00311Q8N616 119 aa14.18□□□□□ -0.14
COL5A3-201ENST00000264828 IGKV1OR2-108A0A075B7D4 117 aa14.17□□□□□ -0.14
COL5A3-201ENST00000264828 K7EMI3 77 aa14.17□□□□□ -0.14
COL5A3-201ENST00000264828 ZNF491Q8N8L2 437 aa14.17□□□□□ -0.14
COL5A3-201ENST00000264828 PRSS33Q8NF86 280 aa14.17□□□□□ -0.14
COL5A3-201ENST00000264828 CFC1BP0CG36 223 aa14.17□□□□□ -0.14
COL5A3-201ENST00000264828 CFC1P0CG37 223 aa14.17□□□□□ -0.14
COL5A3-201ENST00000264828 IGFL3Q6UXB1 125 aa14.17□□□□□ -0.14
COL5A3-201ENST00000264828 ZNF747Q9BV97 191 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms