RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 PAX2Q02962 417 aa11.04□□□□□ -0.64
CDH3-201ENST00000264012 MSMPQ1L6U9 139 aa11.04□□□□□ -0.64
CDH3-201ENST00000264012 ANXA2RQ3ZCQ2 193 aa11.04□□□□□ -0.64
CDH3-201ENST00000264012 ASPHD1Q5U4P2 390 aa11.04□□□□□ -0.64
CDH3-201ENST00000264012 C17orf77Q96MU5 243 aa11.04□□□□□ -0.64
CDH3-201ENST00000264012 PRR14LQ5THK1 2151 aa11.04□□□□□ -0.64
CDH3-201ENST00000264012 IGHV4-39P01824 125 aa11.04□□□□□ -0.64
CDH3-201ENST00000264012 IGHV4-59P01825 116 aa11.04□□□□□ -0.64
CDH3-201ENST00000264012 IGHV1OR15-1A0A075B7D0 117 aa11.04□□□□□ -0.64
CDH3-201ENST00000264012 IGLC2P0DOY2 106 aa11.04□□□□□ -0.64
CDH3-201ENST00000264012 IGLC3P0DOY3 106 aa11.04□□□□□ -0.64
CDH3-201ENST00000264012 PRSS57Q6UWY2 283 aa11.03□□□□□ -0.64
CDH3-201ENST00000264012 RHODO00212 210 aa11.03□□□□□ -0.64
CDH3-201ENST00000264012 CDKN1BP46527 198 aa11.03□□□□□ -0.64
CDH3-201ENST00000264012 MRPL51Q4U2R6 128 aaKnown RBP11.03□□□□□ -0.64
CDH3-201ENST00000264012 TMEM86BQ8N661 226 aa11.03□□□□□ -0.64
CDH3-201ENST00000264012 EML6Q6ZMW3 1958 aa11.03□□□□□ -0.64
CDH3-201ENST00000264012 TRAV12-2A0A075B6T6 113 aa11.03□□□□□ -0.64
CDH3-201ENST00000264012 H3BUA1 57 aa11.03□□□□□ -0.64
CDH3-201ENST00000264012 NAA38Q9BRA0 125 aaKnown RBP11.03□□□□□ -0.64
CDH3-201ENST00000264012 TRAV13-1A0A0B4J241 112 aa11.02□□□□□ -0.64
CDH3-201ENST00000264012 Q6ZWC4 215 aa11.02□□□□□ -0.64
CDH3-201ENST00000264012 RITA1Q96K30 269 aa11.02□□□□□ -0.64
CDH3-201ENST00000264012 ERG28Q9UKR5 140 aa11.02□□□□□ -0.64
CDH3-201ENST00000264012 STPG4Q8N801 248 aa11.02□□□□□ -0.65
CDH3-201ENST00000264012 SONP18583 2426 aaKnown RBP11.02□□□□□ -0.65
CDH3-201ENST00000264012 IGHV4-30-2A0A087WSY4 118 aa11.02□□□□□ -0.65
CDH3-201ENST00000264012 CKS1BP61024 79 aa11.02□□□□□ -0.65
CDH3-201ENST00000264012 RASL10AQ92737 203 aa11.02□□□□□ -0.65
CDH3-201ENST00000264012 C2orf66Q6UXQ4 117 aa11.02□□□□□ -0.65
CDH3-201ENST00000264012 Q8NA96 180 aa11.02□□□□□ -0.65
CDH3-201ENST00000264012 PYGO2Q9BRQ0 406 aa11.02□□□□□ -0.65
CDH3-201ENST00000264012 IGHV7-81A0A0B4J1V7 117 aa11.01□□□□□ -0.65
CDH3-201ENST00000264012 K7EN84 100 aa11.01□□□□□ -0.65
CDH3-201ENST00000264012 HLA-DMBP28068 263 aa11.01□□□□□ -0.65
CDH3-201ENST00000264012 LY6G5BQ8NDX9 201 aa11.01□□□□□ -0.65
CDH3-201ENST00000264012 VPREB3Q9UKI3 123 aa11.01□□□□□ -0.65
CDH3-201ENST00000264012 GAGE12BA1L429 117 aa11.01□□□□□ -0.65
CDH3-201ENST00000264012 LTAP01374 205 aa11.01□□□□□ -0.65
CDH3-201ENST00000264012 Q8N8P6 123 aa11.01□□□□□ -0.65
CDH3-201ENST00000264012 NPBQ8NG41 125 aa11.01□□□□□ -0.65
CDH3-201ENST00000264012 PRB1P04280 392 aa11.01□□□□□ -0.65
CDH3-201ENST00000264012 NPC2P61916 151 aa11.01□□□□□ -0.65
CDH3-201ENST00000264012 C11orf68Q9H3H3 251 aaKnown RBP11.01□□□□□ -0.65
CDH3-201ENST00000264012 TP53TG1Q9Y2A0 90 aa11.01□□□□□ -0.65
CDH3-201ENST00000264012 M0R2P5 195 aa11.01□□□□□ -0.65
CDH3-201ENST00000264012 TSPAN13O95857 204 aa11.01□□□□□ -0.65
CDH3-201ENST00000264012 GAGE13Q4V321 117 aa11.01□□□□□ -0.65
CDH3-201ENST00000264012 DENND4AQ7Z401 1863 aa11□□□□□ -0.65
CDH3-201ENST00000264012 K7EIM0 57 aa11□□□□□ -0.65
CDH3-201ENST00000264012 IGKV1-17P01599 117 aa11□□□□□ -0.65
CDH3-201ENST00000264012 IGHV4-38-2P0DP08 117 aa11□□□□□ -0.65
CDH3-201ENST00000264012 Q71RC1 249 aaPredicted RBP11□□□□□ -0.65
CDH3-201ENST00000264012 TRAV16A0A0A6YYK6 109 aaPredicted RBP11□□□□□ -0.65
CDH3-201ENST00000264012 TRAV26-2A0A0B4J265 109 aa11□□□□□ -0.65
CDH3-201ENST00000264012 I3L2K1 104 aa11□□□□□ -0.65
CDH3-201ENST00000264012 SPXQ9BT56 116 aa11□□□□□ -0.65
CDH3-201ENST00000264012 IGF2RP11717 2491 aa10.99□□□□□ -0.65
CDH3-201ENST00000264012 TMEM131Q92545 1883 aa10.99□□□□□ -0.65
CDH3-201ENST00000264012 IGHV3-16A0A0C4DH30 117 aa10.99□□□□□ -0.65
CDH3-201ENST00000264012 SDHAF1A6NFY7 115 aa10.99□□□□□ -0.65
CDH3-201ENST00000264012 SLC25A20O43772 301 aa10.99□□□□□ -0.65
CDH3-201ENST00000264012 NPSP0C0P6 89 aa10.99□□□□□ -0.65
CDH3-201ENST00000264012 DYNAPQ8N1N2 210 aa10.99□□□□□ -0.65
CDH3-201ENST00000264012 PLA2G2EQ9NZK7 142 aa10.99□□□□□ -0.65
CDH3-201ENST00000264012 COL4A4P53420 1690 aaPredicted RBP10.99□□□□□ -0.65
CDH3-201ENST00000264012 TRAV8-2A0A0B4J237 113 aa10.99□□□□□ -0.65
CDH3-201ENST00000264012 TIMM21Q9BVV7 248 aa10.99□□□□□ -0.65
CDH3-201ENST00000264012 A8MWV9 139 aa10.98□□□□□ -0.65
CDH3-201ENST00000264012 IGLV2-14P01704 120 aa10.98□□□□□ -0.65
CDH3-201ENST00000264012 AGPAT4-IT1Q9H0P7 198 aa10.98□□□□□ -0.65
CDH3-201ENST00000264012 DYSFO75923 2080 aa10.98□□□□□ -0.65
CDH3-201ENST00000264012 IGLV1-47P01700 117 aa10.98□□□□□ -0.65
CDH3-201ENST00000264012 TMEM95Q3KNT9 176 aa10.98□□□□□ -0.65
CDH3-201ENST00000264012 IGLV11-55A0A075B6I3 123 aa10.98□□□□□ -0.65
CDH3-201ENST00000264012 GAGE12JA6NER3 117 aa10.98□□□□□ -0.65
CDH3-201ENST00000264012 ESDP10768 282 aa10.98□□□□□ -0.65
CDH3-201ENST00000264012 CFHR3Q02985 330 aa10.98□□□□□ -0.65
CDH3-201ENST00000264012 GAGE4Q13068 117 aa10.98□□□□□ -0.65
CDH3-201ENST00000264012 GAGE5Q13069 117 aa10.98□□□□□ -0.65
CDH3-201ENST00000264012 FBXL19-AS1Q494R0 122 aa10.98□□□□□ -0.65
CDH3-201ENST00000264012 C6orf226Q5I0X4 101 aa10.98□□□□□ -0.65
CDH3-201ENST00000264012 C10orf105Q8TEF2 133 aa10.98□□□□□ -0.65
CDH3-201ENST00000264012 MYO18BQ8IUG5 2567 aa10.98□□□□□ -0.65
CDH3-201ENST00000264012 F6UB75 175 aa10.97□□□□□ -0.65
CDH3-201ENST00000264012 NPYP01303 97 aa10.97□□□□□ -0.65
CDH3-201ENST00000264012 PAX4O43316 350 aa10.97□□□□□ -0.65
CDH3-201ENST00000264012 KIR3DS1Q14943 382 aa10.97□□□□□ -0.65
CDH3-201ENST00000264012 CHAC1Q9BUX1 264 aa10.97□□□□□ -0.65
CDH3-201ENST00000264012 SIGLEC8Q9NYZ4 499 aa10.97□□□□□ -0.65
CDH3-201ENST00000264012 KIAA1549LQ6ZVL6 1849 aa10.97□□□□□ -0.65
CDH3-201ENST00000264012 IGHV1-24A0A0C4DH33 117 aa10.97□□□□□ -0.65
CDH3-201ENST00000264012 BLCAPP62952 87 aa10.97□□□□□ -0.65
CDH3-201ENST00000264012 DEFB113Q30KQ7 82 aa10.97□□□□□ -0.65
CDH3-201ENST00000264012 OCIAD2Q56VL3 154 aa10.97□□□□□ -0.65
CDH3-201ENST00000264012 PATE2Q6UY27 113 aa10.97□□□□□ -0.65
CDH3-201ENST00000264012 KIR2DL5BA0A0G2JN68 375 aa10.96□□□□□ -0.65
CDH3-201ENST00000264012 KIR2DL5BA0A0G2JPC4 375 aa10.96□□□□□ -0.65
CDH3-201ENST00000264012 HOXD3P31249 432 aaPredicted RBP10.96□□□□□ -0.65
CDH3-201ENST00000264012 DAZAP2Q15038 168 aaPredicted RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms