RNA–Protein interactions for RNA: ENST00000263351.9

ZNF541-201, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-201ENST00000263351 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.73□□□□□ -0.37
ZNF541-201ENST00000263351 SRSF8Q9BRL6 282 aaKnown RBP12.73□□□□□ -0.37
ZNF541-201ENST00000263351 KLK15Q9H2R5 256 aa12.73□□□□□ -0.37
ZNF541-201ENST00000263351 CEACAM3P40198 252 aa12.72□□□□□ -0.37
ZNF541-201ENST00000263351 PRR9Q5T870 116 aa12.72□□□□□ -0.37
ZNF541-201ENST00000263351 TMEM219Q86XT9 240 aa12.72□□□□□ -0.37
ZNF541-201ENST00000263351 ABCA2Q9BZC7 2435 aa12.72□□□□□ -0.37
ZNF541-201ENST00000263351 ITPR1Q14643 2758 aa12.72□□□□□ -0.37
ZNF541-201ENST00000263351 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.72□□□□□ -0.37
ZNF541-201ENST00000263351 SEC11AP67812 179 aa12.72□□□□□ -0.37
ZNF541-201ENST00000263351 MTURNQ8N3F0 131 aa12.72□□□□□ -0.37
ZNF541-201ENST00000263351 Q8N6K4 173 aa12.72□□□□□ -0.37
ZNF541-201ENST00000263351 CCDC140Q96MF4 163 aa12.72□□□□□ -0.37
ZNF541-201ENST00000263351 AP1S3Q96PC3 154 aa12.72□□□□□ -0.37
ZNF541-201ENST00000263351 MAP1LC3AQ9H492 121 aa12.72□□□□□ -0.37
ZNF541-201ENST00000263351 ZFAND3Q9H8U3 227 aa12.72□□□□□ -0.37
ZNF541-201ENST00000263351 TMEM160Q9NX00 188 aa12.72□□□□□ -0.37
ZNF541-201ENST00000263351 PPBPP02775 128 aa12.71□□□□□ -0.37
ZNF541-201ENST00000263351 ADORA2A-AS1P86434 159 aa12.71□□□□□ -0.37
ZNF541-201ENST00000263351 LCNL1Q6ZST4 164 aa12.71□□□□□ -0.37
ZNF541-201ENST00000263351 MAPKAPK5-AS1Q8N8E1 139 aa12.71□□□□□ -0.37
ZNF541-201ENST00000263351 TRAV40A0A0B4J280 105 aa12.71□□□□□ -0.38
ZNF541-201ENST00000263351 BUB3O43684 328 aa12.71□□□□□ -0.38
ZNF541-201ENST00000263351 TRAV8-2A0A0B4J237 113 aa12.7□□□□□ -0.38
ZNF541-201ENST00000263351 FABP5P3A8MUU1 101 aa12.7□□□□□ -0.38
ZNF541-201ENST00000263351 HSD52Q0P140 79 aa12.7□□□□□ -0.38
ZNF541-201ENST00000263351 ZC2HC1BQ5TFG8 222 aa12.7□□□□□ -0.38
ZNF541-201ENST00000263351 TMEM8BA6NDV4 472 aa12.7□□□□□ -0.38
ZNF541-201ENST00000263351 H3BRM9 83 aa12.7□□□□□ -0.38
ZNF541-201ENST00000263351 OR2K2Q8NGT1 345 aa12.7□□□□□ -0.38
ZNF541-201ENST00000263351 IGKV3-7A0A075B6H7 116 aa12.69□□□□□ -0.38
ZNF541-201ENST00000263351 BMI1P35226 326 aa12.69□□□□□ -0.38
ZNF541-201ENST00000263351 MRPL35Q9NZE8 188 aaKnown RBP12.69□□□□□ -0.38
ZNF541-201ENST00000263351 COTL1Q14019 142 aa12.69□□□□□ -0.38
ZNF541-201ENST00000263351 ZNF502Q8TBZ5 544 aa12.69□□□□□ -0.38
ZNF541-201ENST00000263351 TIMD4Q96H15 378 aa12.69□□□□□ -0.38
ZNF541-201ENST00000263351 AJUBAQ96IF1 538 aa12.69□□□□□ -0.38
ZNF541-201ENST00000263351 SPCS1Q9Y6A9 102 aa12.69□□□□□ -0.38
ZNF541-201ENST00000263351 CSPG4Q6UVK1 2322 aa12.68□□□□□ -0.38
ZNF541-201ENST00000263351 K7EP34 96 aa12.68□□□□□ -0.38
ZNF541-201ENST00000263351 OR1N2Q8NGR9 330 aa12.68□□□□□ -0.38
ZNF541-201ENST00000263351 SORL1Q92673 2214 aa12.68□□□□□ -0.38
ZNF541-201ENST00000263351 A6NDN8 102 aa12.68□□□□□ -0.38
ZNF541-201ENST00000263351 H3BVH4 76 aa12.68□□□□□ -0.38
ZNF541-201ENST00000263351 IGHV7-4-1A0A0J9YVY3 117 aa12.67□□□□□ -0.38
ZNF541-201ENST00000263351 FCER1GP30273 86 aa12.67□□□□□ -0.38
ZNF541-201ENST00000263351 CHAC1Q9BUX1 264 aa12.67□□□□□ -0.38
ZNF541-201ENST00000263351 NHP2Q9NX24 153 aaKnown RBP12.67□□□□□ -0.38
ZNF541-201ENST00000263351 IGLV2-18A0A075B6J9 118 aa12.67□□□□□ -0.38
ZNF541-201ENST00000263351 TRBV25-1A0A075B6N4 114 aa12.67□□□□□ -0.38
ZNF541-201ENST00000263351 A0A1W2PPM0 123 aa12.67□□□□□ -0.38
ZNF541-201ENST00000263351 GOSR1O95249 250 aa12.67□□□□□ -0.38
ZNF541-201ENST00000263351 TRBV12-3P01733 135 aa12.67□□□□□ -0.38
ZNF541-201ENST00000263351 SMIM17P0DL12 118 aa12.67□□□□□ -0.38
ZNF541-201ENST00000263351 COX8CQ7Z4L0 72 aa12.67□□□□□ -0.38
ZNF541-201ENST00000263351 DOPEY2Q9Y3R5 2298 aa12.66□□□□□ -0.38
ZNF541-201ENST00000263351 ZANQ9Y493 2812 aa12.66□□□□□ -0.38
ZNF541-201ENST00000263351 SAA4P35542 130 aa12.66□□□□□ -0.38
ZNF541-201ENST00000263351 C20orf173Q96LM9 149 aa12.66□□□□□ -0.38
ZNF541-201ENST00000263351 K7ENP7 123 aa12.66□□□□□ -0.38
ZNF541-201ENST00000263351 M0R1W7 72 aa12.66□□□□□ -0.38
ZNF541-201ENST00000263351 IGKCP01834 107 aa12.66□□□□□ -0.38
ZNF541-201ENST00000263351 C11orf71Q6IPW1 123 aa12.66□□□□□ -0.38
ZNF541-201ENST00000263351 GLMPQ8WWB7 406 aa12.66□□□□□ -0.38
ZNF541-201ENST00000263351 ZNF48Q96MX3 618 aaPredicted RBP12.66□□□□□ -0.38
ZNF541-201ENST00000263351 C8orf86Q6ZUL3 223 aa12.65□□□□□ -0.38
ZNF541-201ENST00000263351 OR9G4Q8NGQ1 327 aa12.65□□□□□ -0.38
ZNF541-201ENST00000263351 F6UB75 175 aa12.65□□□□□ -0.39
ZNF541-201ENST00000263351 LINC01559Q495D7 138 aa12.65□□□□□ -0.39
ZNF541-201ENST00000263351 NRACQ8N912 160 aa12.65□□□□□ -0.39
ZNF541-201ENST00000263351 WFDC12Q8WWY7 111 aa12.65□□□□□ -0.39
ZNF541-201ENST00000263351 NEGR1Q7Z3B1 354 aa12.64□□□□□ -0.39
ZNF541-201ENST00000263351 DPF1Q92782 380 aa12.64□□□□□ -0.39
ZNF541-201ENST00000263351 M0R381 172 aa12.64□□□□□ -0.39
ZNF541-201ENST00000263351 SAMD5Q5TGI4 173 aa12.64□□□□□ -0.39
ZNF541-201ENST00000263351 RPL39LQ96EH5 51 aaKnown RBP12.64□□□□□ -0.39
ZNF541-201ENST00000263351 CNFNQ9BYD5 112 aa12.64□□□□□ -0.39
ZNF541-201ENST00000263351 SIRPDQ9H106 197 aa12.64□□□□□ -0.39
ZNF541-201ENST00000263351 CSTL1Q9H114 145 aa12.64□□□□□ -0.39
ZNF541-201ENST00000263351 CENPEQ02224 2701 aa12.63□□□□□ -0.39
ZNF541-201ENST00000263351 K7ERU9 68 aa12.63□□□□□ -0.39
ZNF541-201ENST00000263351 RPS20P60866 119 aaKnown RBP12.63□□□□□ -0.39
ZNF541-201ENST00000263351 AMTNQ6UX39 209 aa12.63□□□□□ -0.39
ZNF541-201ENST00000263351 UNQ9165/PRO28630Q6UXU0 137 aa12.63□□□□□ -0.39
ZNF541-201ENST00000263351 ZMAT4Q9H898 229 aa12.63□□□□□ -0.39
ZNF541-201ENST00000263351 EDN2P20800 178 aa12.63□□□□□ -0.39
ZNF541-201ENST00000263351 GTF2H5Q6ZYL4 71 aa12.63□□□□□ -0.39
ZNF541-201ENST00000263351 OR4X2Q8NGF9 303 aa12.63□□□□□ -0.39
ZNF541-201ENST00000263351 SPANXN1Q5VSR9 72 aa12.62□□□□□ -0.39
ZNF541-201ENST00000263351 FLNCQ14315 2725 aa12.62□□□□□ -0.39
ZNF541-201ENST00000263351 RPL24P83731 157 aaKnown RBP12.62□□□□□ -0.39
ZNF541-201ENST00000263351 BRD3OSQ6XYD6 125 aa12.62□□□□□ -0.39
ZNF541-201ENST00000263351 NPFFR1Q9GZQ6 430 aa12.62□□□□□ -0.39
ZNF541-201ENST00000263351 CCDC144NLQ6NUI1 221 aa12.61□□□□□ -0.39
ZNF541-201ENST00000263351 FAM110DQ8TAY7 271 aaPredicted RBP12.61□□□□□ -0.39
ZNF541-201ENST00000263351 TEX48A0A1B0GUV7 120 aa12.61□□□□□ -0.39
ZNF541-201ENST00000263351 SRD5A1P18405 259 aa12.61□□□□□ -0.39
ZNF541-201ENST00000263351 EBI3Q14213 229 aa12.61□□□□□ -0.39
ZNF541-201ENST00000263351 TMEM78Q5T7P6 136 aa12.61□□□□□ -0.39
ZNF541-201ENST00000263351 SFTA2Q6UW10 78 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms