RNA–Protein interactions for RNA: ENST00000262962.11

CCDC94-201, Transcript of Coiled-coil domain-containing protein 94, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC94, Length 1,434 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC94-201ENST00000262962 LINC00862A6NCI5 91 aa12.34□□□□□ -0.43
CCDC94-201ENST00000262962 RNASE4P34096 147 aaKnown RBP12.34□□□□□ -0.43
CCDC94-201ENST00000262962 CEBPGP53567 150 aa12.34□□□□□ -0.43
CCDC94-201ENST00000262962 BTN1A1Q13410 526 aa12.34□□□□□ -0.43
CCDC94-201ENST00000262962 SMUG1Q53HV7 270 aa12.34□□□□□ -0.43
CCDC94-201ENST00000262962 PRR9Q5T870 116 aa12.34□□□□□ -0.43
CCDC94-201ENST00000262962 COX8CQ7Z4L0 72 aa12.34□□□□□ -0.43
CCDC94-201ENST00000262962 BAGE2Q86Y30 109 aa12.34□□□□□ -0.43
CCDC94-201ENST00000262962 RNF183Q96D59 192 aa12.34□□□□□ -0.43
CCDC94-201ENST00000262962 TM2D3Q9BRN9 247 aa12.34□□□□□ -0.43
CCDC94-201ENST00000262962 TP53TG1Q9Y2A0 90 aa12.34□□□□□ -0.43
CCDC94-201ENST00000262962 C9JQL5 133 aa12.33□□□□□ -0.44
CCDC94-201ENST00000262962 GNG4P50150 75 aa12.33□□□□□ -0.44
CCDC94-201ENST00000262962 CENPWQ5EE01 88 aa12.33□□□□□ -0.44
CCDC94-201ENST00000262962 Q6AWC8 147 aa12.33□□□□□ -0.44
CCDC94-201ENST00000262962 TMEM183AQ8IXX5 376 aa12.33□□□□□ -0.44
CCDC94-201ENST00000262962 TMEM256Q8N2U0 113 aa12.33□□□□□ -0.44
CCDC94-201ENST00000262962 SPATA25Q9BR10 227 aa12.33□□□□□ -0.44
CCDC94-201ENST00000262962 NIPSNAP3BQ9BS92 247 aa12.33□□□□□ -0.44
CCDC94-201ENST00000262962 GOLT1BQ9Y3E0 138 aa12.33□□□□□ -0.44
CCDC94-201ENST00000262962 PRKDCP78527 4128 aaKnown RBP12.33□□□□□ -0.44
CCDC94-201ENST00000262962 TRAV12-3A0A0B4J271 114 aa12.32□□□□□ -0.44
CCDC94-201ENST00000262962 C9JCJ5 164 aa12.32□□□□□ -0.44
CCDC94-201ENST00000262962 SPRY2O43597 315 aa12.32□□□□□ -0.44
CCDC94-201ENST00000262962 GCGP01275 180 aa12.32□□□□□ -0.44
CCDC94-201ENST00000262962 COL7A1Q02388 2944 aa12.32□□□□□ -0.44
CCDC94-201ENST00000262962 ZNF674Q2M3X9 581 aa12.32□□□□□ -0.44
CCDC94-201ENST00000262962 UQCC3Q6UW78 93 aa12.32□□□□□ -0.44
CCDC94-201ENST00000262962 ZNF705AQ6ZN79 300 aaPredicted RBP12.32□□□□□ -0.44
CCDC94-201ENST00000262962 C1orf158Q8N1D5 194 aa12.32□□□□□ -0.44
CCDC94-201ENST00000262962 SMIM12Q96EX1 92 aa12.32□□□□□ -0.44
CCDC94-201ENST00000262962 MLST8Q9BVC4 326 aa12.32□□□□□ -0.44
CCDC94-201ENST00000262962 TRBV20OR9-2A0A075B6H5 130 aa12.31□□□□□ -0.44
CCDC94-201ENST00000262962 ZNF324O75467 553 aaPredicted RBP12.31□□□□□ -0.44
CCDC94-201ENST00000262962 RBMY1A1P0DJD3 496 aaKnown RBP12.31□□□□□ -0.44
CCDC94-201ENST00000262962 RBMY1CP0DJD4 496 aa12.31□□□□□ -0.44
CCDC94-201ENST00000262962 RBMY1FQ15415 496 aaKnown RBP12.31□□□□□ -0.44
CCDC94-201ENST00000262962 COMMD7Q86VX2 200 aa12.31□□□□□ -0.44
CCDC94-201ENST00000262962 ZC2HC1AQ96GY0 325 aa12.31□□□□□ -0.44
CCDC94-201ENST00000262962 SMIM7Q9BQ49 75 aa12.31□□□□□ -0.44
CCDC94-201ENST00000262962 OVOL2Q9BRP0 275 aa12.31□□□□□ -0.44
CCDC94-201ENST00000262962 TMEM208Q9BTX3 173 aa12.31□□□□□ -0.44
CCDC94-201ENST00000262962 ZMAT4Q9H898 229 aa12.31□□□□□ -0.44
CCDC94-201ENST00000262962 TRAV21A0A0B4J279 112 aa12.3□□□□□ -0.44
CCDC94-201ENST00000262962 H7BYZ3 331 aa12.3□□□□□ -0.44
CCDC94-201ENST00000262962 EIF4E3Q8N5X7 224 aaKnown RBP12.3□□□□□ -0.44
CCDC94-201ENST00000262962 NHLRC2Q8NBF2 726 aa12.3□□□□□ -0.44
CCDC94-201ENST00000262962 IGHV3OR16-12A0A075B7B8 117 aa12.29□□□□□ -0.44
CCDC94-201ENST00000262962 IGLV2-8P01709 118 aa12.29□□□□□ -0.44
CCDC94-201ENST00000262962 PFN1P07737 140 aaKnown RBP12.29□□□□□ -0.44
CCDC94-201ENST00000262962 NHLRC4P0CG21 123 aaPredicted RBP12.29□□□□□ -0.44
CCDC94-201ENST00000262962 ZNF80P51504 273 aaPredicted RBP12.29□□□□□ -0.44
CCDC94-201ENST00000262962 FAM74A3Q4VXF1 159 aa12.29□□□□□ -0.44
CCDC94-201ENST00000262962 LINC01587Q99440 93 aa12.29□□□□□ -0.44
CCDC94-201ENST00000262962 RETNQ9HD89 108 aa12.29□□□□□ -0.44
CCDC94-201ENST00000262962 ZNF727A8MUV8 499 aa12.28□□□□□ -0.44
CCDC94-201ENST00000262962 SOHLH1Q5JUK2 328 aa12.28□□□□□ -0.44
CCDC94-201ENST00000262962 OR11H2Q8NH07 326 aa12.28□□□□□ -0.44
CCDC94-201ENST00000262962 NEU1Q99519 415 aa12.28□□□□□ -0.44
CCDC94-201ENST00000262962 PYGO2Q9BRQ0 406 aa12.28□□□□□ -0.44
CCDC94-201ENST00000262962 TENM3Q9P273 2699 aa12.28□□□□□ -0.44
CCDC94-201ENST00000262962 FABP5P3A8MUU1 101 aa12.28□□□□□ -0.44
CCDC94-201ENST00000262962 SFTA3P0C7M3 94 aa12.28□□□□□ -0.44
CCDC94-201ENST00000262962 FAM162BQ5T6X4 162 aa12.28□□□□□ -0.44
CCDC94-201ENST00000262962 Q6ZQT7 251 aa12.28□□□□□ -0.44
CCDC94-201ENST00000262962 BIN3Q9NQY0 253 aa12.28□□□□□ -0.44
CCDC94-201ENST00000262962 LY96Q9Y6Y9 160 aa12.28□□□□□ -0.44
CCDC94-201ENST00000262962 X6R8D5 127 aa12.28□□□□□ -0.44
CCDC94-201ENST00000262962 DNAH9Q9NYC9 4486 aa12.27□□□□□ -0.45
CCDC94-201ENST00000262962 PGPEP1LA6NFU8 196 aa12.27□□□□□ -0.45
CCDC94-201ENST00000262962 SMIM9A6NGZ8 99 aa12.27□□□□□ -0.45
CCDC94-201ENST00000262962 MGST1P10620 155 aaKnown RBP12.27□□□□□ -0.45
CCDC94-201ENST00000262962 CRIP1P50238 77 aa12.27□□□□□ -0.45
CCDC94-201ENST00000262962 LINC00467Q9BRT7 94 aa12.27□□□□□ -0.45
CCDC94-201ENST00000262962 IGHV1OR15-1A0A075B7D0 117 aa12.26□□□□□ -0.45
CCDC94-201ENST00000262962 OCC1Q8TAD7 63 aa12.26□□□□□ -0.45
CCDC94-201ENST00000262962 SH2D1AO60880 128 aa12.25□□□□□ -0.45
CCDC94-201ENST00000262962 MIFP14174 115 aa12.25□□□□□ -0.45
CCDC94-201ENST00000262962 TMEM241Q24JQ0 296 aa12.25□□□□□ -0.45
CCDC94-201ENST00000262962 RRN3P1Q2M238 152 aa12.25□□□□□ -0.45
CCDC94-201ENST00000262962 PRR27Q6MZM9 219 aa12.25□□□□□ -0.45
CCDC94-201ENST00000262962 FAM159AQ6UWV7 190 aa12.25□□□□□ -0.45
CCDC94-201ENST00000262962 ZNF705GA8MUZ8 300 aaPredicted RBP12.24□□□□□ -0.45
CCDC94-201ENST00000262962 HTN1P15515 57 aa12.24□□□□□ -0.45
CCDC94-201ENST00000262962 TDRG1Q3Y452 100 aa12.24□□□□□ -0.45
CCDC94-201ENST00000262962 MUC21Q5SSG8 566 aa12.24□□□□□ -0.45
CCDC94-201ENST00000262962 KCNS1Q96KK3 526 aa12.24□□□□□ -0.45
CCDC94-201ENST00000262962 NAT8Q9UHE5 227 aa12.24□□□□□ -0.45
CCDC94-201ENST00000262962 NAGKQ9UJ70 344 aa12.24□□□□□ -0.45
CCDC94-201ENST00000262962 TGP01266 2768 aa12.24□□□□□ -0.45
CCDC94-201ENST00000262962 TMEM218A2RU14 115 aa12.23□□□□□ -0.45
CCDC94-201ENST00000262962 K7EN84 100 aa12.23□□□□□ -0.45
CCDC94-201ENST00000262962 ANXA2RQ3ZCQ2 193 aa12.23□□□□□ -0.45
CCDC94-201ENST00000262962 LINC01551Q86U37 167 aa12.23□□□□□ -0.45
CCDC94-201ENST00000262962 Q8NAQ8 132 aa12.23□□□□□ -0.45
CCDC94-201ENST00000262962 C11orf21Q9P2W6 132 aa12.23□□□□□ -0.45
CCDC94-201ENST00000262962 CBY3A6NI87 242 aa12.22□□□□□ -0.45
CCDC94-201ENST00000262962 OR5I1Q13606 314 aa12.22□□□□□ -0.45
CCDC94-201ENST00000262962 TMEM263Q8WUH6 116 aaKnown RBP12.22□□□□□ -0.45
CCDC94-201ENST00000262962 DAZAP1Q96EP5 407 aaKnown RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 189.3 ms