RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 DPM2O94777 84 aa13.49□□□□□ -0.25
TRAM1-201ENST00000262213 COX8CQ7Z4L0 72 aa13.49□□□□□ -0.25
TRAM1-201ENST00000262213 AKAP6Q13023 2319 aa13.49□□□□□ -0.25
TRAM1-201ENST00000262213 IGKV3D-20A0A0C4DH25 116 aa13.48□□□□□ -0.25
TRAM1-201ENST00000262213 TEX48A0A1B0GUV7 120 aa13.48□□□□□ -0.25
TRAM1-201ENST00000262213 SPRY2O43597 315 aa13.48□□□□□ -0.25
TRAM1-201ENST00000262213 C15orf32Q32M92 178 aa13.48□□□□□ -0.25
TRAM1-201ENST00000262213 MAPKAPK5-AS1Q8N8E1 139 aa13.48□□□□□ -0.25
TRAM1-201ENST00000262213 CLEC3BP05452 202 aa13.48□□□□□ -0.25
TRAM1-201ENST00000262213 EFNA4P52798 201 aa13.48□□□□□ -0.25
TRAM1-201ENST00000262213 GOSR1O95249 250 aa13.47□□□□□ -0.25
TRAM1-201ENST00000262213 VMO1Q7Z5L0 202 aa13.47□□□□□ -0.25
TRAM1-201ENST00000262213 ZNF48Q96MX3 618 aaPredicted RBP13.47□□□□□ -0.25
TRAM1-201ENST00000262213 KLK15Q9H2R5 256 aa13.47□□□□□ -0.25
TRAM1-201ENST00000262213 ZMAT4Q9H898 229 aa13.47□□□□□ -0.25
TRAM1-201ENST00000262213 MTURNQ8N3F0 131 aa13.47□□□□□ -0.25
TRAM1-201ENST00000262213 SCGB2A1O75556 95 aa13.46□□□□□ -0.25
TRAM1-201ENST00000262213 Q8N8P6 123 aa13.46□□□□□ -0.25
TRAM1-201ENST00000262213 AGPAT4-IT1Q9H0P7 198 aa13.46□□□□□ -0.25
TRAM1-201ENST00000262213 IGHV7-81A0A0B4J1V7 117 aa13.46□□□□□ -0.26
TRAM1-201ENST00000262213 LINC01559Q495D7 138 aa13.46□□□□□ -0.26
TRAM1-201ENST00000262213 ODF3BA8MYP8 253 aa13.45□□□□□ -0.26
TRAM1-201ENST00000262213 PRTN3P24158 256 aa13.45□□□□□ -0.26
TRAM1-201ENST00000262213 CLEC19AQ6UXS0 136 aa13.45□□□□□ -0.26
TRAM1-201ENST00000262213 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.45□□□□□ -0.26
TRAM1-201ENST00000262213 CEND1Q8N111 149 aa13.45□□□□□ -0.26
TRAM1-201ENST00000262213 MYOZ3Q8TDC0 251 aa13.45□□□□□ -0.26
TRAM1-201ENST00000262213 TIMD4Q96H15 378 aa13.45□□□□□ -0.26
TRAM1-201ENST00000262213 CNFNQ9BYD5 112 aa13.45□□□□□ -0.26
TRAM1-201ENST00000262213 PSMG3-AS1Q96PY0 264 aa13.44□□□□□ -0.26
TRAM1-201ENST00000262213 HIGD1BQ9P298 99 aa13.44□□□□□ -0.26
TRAM1-201ENST00000262213 ATP5LO75964 103 aa13.44□□□□□ -0.26
TRAM1-201ENST00000262213 SPANXN1Q5VSR9 72 aa13.44□□□□□ -0.26
TRAM1-201ENST00000262213 BUB3O43684 328 aa13.43□□□□□ -0.26
TRAM1-201ENST00000262213 LCNL1Q6ZST4 164 aa13.43□□□□□ -0.26
TRAM1-201ENST00000262213 LAGE3Q14657 143 aa13.43□□□□□ -0.26
TRAM1-201ENST00000262213 AMTNQ6UX39 209 aa13.43□□□□□ -0.26
TRAM1-201ENST00000262213 PHLDA1Q8WV24 401 aaPredicted RBP13.43□□□□□ -0.26
TRAM1-201ENST00000262213 IGLV2-18A0A075B6J9 118 aa13.43□□□□□ -0.26
TRAM1-201ENST00000262213 G3V318 75 aa13.43□□□□□ -0.26
TRAM1-201ENST00000262213 WFDC2Q14508 124 aa13.43□□□□□ -0.26
TRAM1-201ENST00000262213 TMEM78Q5T7P6 136 aa13.43□□□□□ -0.26
TRAM1-201ENST00000262213 H3BVH4 76 aa13.42□□□□□ -0.26
TRAM1-201ENST00000262213 HIST1H4GQ99525 98 aa13.42□□□□□ -0.26
TRAM1-201ENST00000262213 GTSF1LQ9H1H1 148 aa13.42□□□□□ -0.26
TRAM1-201ENST00000262213 HRNRQ86YZ3 2850 aaPredicted RBP13.42□□□□□ -0.26
TRAM1-201ENST00000262213 LINC01546A6NGU7 62 aa13.42□□□□□ -0.26
TRAM1-201ENST00000262213 CCDC144NLQ6NUI1 221 aa13.42□□□□□ -0.26
TRAM1-201ENST00000262213 ZFAND3Q9H8U3 227 aa13.42□□□□□ -0.26
TRAM1-201ENST00000262213 LINC01548A6NM66 108 aa13.41□□□□□ -0.26
TRAM1-201ENST00000262213 M0R1W7 72 aa13.41□□□□□ -0.26
TRAM1-201ENST00000262213 SRSF2Q01130 221 aaKnown RBP13.41□□□□□ -0.26
TRAM1-201ENST00000262213 PIFOQ8TCI5 191 aa13.41□□□□□ -0.26
TRAM1-201ENST00000262213 H3BMG7 143 aa13.41□□□□□ -0.26
TRAM1-201ENST00000262213 ATP6V0E1O15342 81 aa13.41□□□□□ -0.26
TRAM1-201ENST00000262213 CDSNQ15517 529 aa13.41□□□□□ -0.26
TRAM1-201ENST00000262213 NRACQ8N912 160 aa13.41□□□□□ -0.26
TRAM1-201ENST00000262213 Q8N9W7 124 aa13.41□□□□□ -0.26
TRAM1-201ENST00000262213 ZNF502Q8TBZ5 544 aa13.41□□□□□ -0.26
TRAM1-201ENST00000262213 ZNF479Q96JC4 524 aa13.41□□□□□ -0.26
TRAM1-201ENST00000262213 PTPRQQ9UMZ3 2332 aa13.4□□□□□ -0.26
TRAM1-201ENST00000262213 IGLL5B9A064 214 aa13.4□□□□□ -0.26
TRAM1-201ENST00000262213 SMPXQ9UHP9 88 aa13.4□□□□□ -0.26
TRAM1-201ENST00000262213 IGHV7-4-1A0A0J9YVY3 117 aa13.4□□□□□ -0.26
TRAM1-201ENST00000262213 IGF1P05019 195 aa13.4□□□□□ -0.26
TRAM1-201ENST00000262213 ZFP36P26651 326 aaKnown RBP13.4□□□□□ -0.26
TRAM1-201ENST00000262213 Q8N6K4 173 aa13.4□□□□□ -0.26
TRAM1-201ENST00000262213 VKORC1Q9BQB6 163 aa13.4□□□□□ -0.26
TRAM1-201ENST00000262213 COL6A6A6NMZ7 2263 aa13.4□□□□□ -0.27
TRAM1-201ENST00000262213 SH2D6Q7Z4S9 175 aa13.39□□□□□ -0.27
TRAM1-201ENST00000262213 MSRB2Q9Y3D2 182 aa13.39□□□□□ -0.27
TRAM1-201ENST00000262213 ATRXP46100 2492 aa13.39□□□□□ -0.27
TRAM1-201ENST00000262213 TRAV8-2A0A0B4J237 113 aa13.39□□□□□ -0.27
TRAM1-201ENST00000262213 DEFB104AQ8WTQ1 72 aa13.39□□□□□ -0.27
TRAM1-201ENST00000262213 TM2D2Q9BX73 214 aa13.39□□□□□ -0.27
TRAM1-201ENST00000262213 CLPSL1A2RUU4 121 aa13.38□□□□□ -0.27
TRAM1-201ENST00000262213 M0R381 172 aa13.38□□□□□ -0.27
TRAM1-201ENST00000262213 C12orf74Q32Q52 190 aa13.38□□□□□ -0.27
TRAM1-201ENST00000262213 SAMD13Q5VXD3 122 aa13.38□□□□□ -0.27
TRAM1-201ENST00000262213 C8orf86Q6ZUL3 223 aa13.38□□□□□ -0.27
TRAM1-201ENST00000262213 HIF1ANQ9NWT6 349 aa13.38□□□□□ -0.27
TRAM1-201ENST00000262213 A0A087WX48 190 aa13.38□□□□□ -0.27
TRAM1-201ENST00000262213 DEFB1P60022 68 aa13.38□□□□□ -0.27
TRAM1-201ENST00000262213 SMAGPQ0VAQ4 97 aa13.38□□□□□ -0.27
TRAM1-201ENST00000262213 CCDC140Q96MF4 163 aa13.38□□□□□ -0.27
TRAM1-201ENST00000262213 SLC50A1Q9BRV3 221 aa13.38□□□□□ -0.27
TRAM1-201ENST00000262213 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.37□□□□□ -0.27
TRAM1-201ENST00000262213 CCL21O00585 134 aa13.37□□□□□ -0.27
TRAM1-201ENST00000262213 LINC00527Q9UJ94 153 aa13.37□□□□□ -0.27
TRAM1-201ENST00000262213 TSSC4Q9Y5U2 329 aaPredicted RBP13.37□□□□□ -0.27
TRAM1-201ENST00000262213 SRSF1Q07955 248 aaKnown RBP eCLIP13.37□□□□□ -0.27
TRAM1-201ENST00000262213 ETDBQ3ZM63 59 aa13.37□□□□□ -0.27
TRAM1-201ENST00000262213 PRR9Q5T870 116 aa13.37□□□□□ -0.27
TRAM1-201ENST00000262213 E9PLD3 99 aa13.37□□□□□ -0.27
TRAM1-201ENST00000262213 AZU1P20160 251 aa13.36□□□□□ -0.27
TRAM1-201ENST00000262213 PSMG4Q5JS54 123 aa13.36□□□□□ -0.27
TRAM1-201ENST00000262213 FAM110DQ8TAY7 271 aaPredicted RBP13.36□□□□□ -0.27
TRAM1-201ENST00000262213 RBAKDNA6NC62 111 aa13.36□□□□□ -0.27
TRAM1-201ENST00000262213 FOXI2Q6ZQN5 318 aa13.36□□□□□ -0.27
TRAM1-201ENST00000262213 C16orf92Q96LL3 132 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 121.7 ms