RNA–Protein interactions for RNA: ENST00000257468.11

UBQLN1-201, Transcript of ubiquilin 1, humanhuman

TSL 1 (best) BASIC

Gene UBQLN1, Length 2,299 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-201ENST00000257468 LINC01545Q5VT33 79 aa12.64□□□□□ -0.39
UBQLN1-201ENST00000257468 DMRTA1Q5VZB9 504 aa12.64□□□□□ -0.39
UBQLN1-201ENST00000257468 MRPS16Q9Y3D3 137 aaKnown RBP12.64□□□□□ -0.39
UBQLN1-201ENST00000257468 DEFB1P60022 68 aa12.64□□□□□ -0.39
UBQLN1-201ENST00000257468 SRSF2Q01130 221 aaKnown RBP12.64□□□□□ -0.39
UBQLN1-201ENST00000257468 Q6ZVH6 145 aa12.64□□□□□ -0.39
UBQLN1-201ENST00000257468 GLMPQ8WWB7 406 aa12.64□□□□□ -0.39
UBQLN1-201ENST00000257468 C16orf92Q96LL3 132 aa12.64□□□□□ -0.39
UBQLN1-201ENST00000257468 IGF1P05019 195 aa12.63□□□□□ -0.39
UBQLN1-201ENST00000257468 ST20Q9HBF5 79 aa12.63□□□□□ -0.39
UBQLN1-201ENST00000257468 DOPEY1Q5JWR5 2465 aa12.63□□□□□ -0.39
UBQLN1-201ENST00000257468 J3KRW8 73 aa12.63□□□□□ -0.39
UBQLN1-201ENST00000257468 MSMBP08118 114 aa12.63□□□□□ -0.39
UBQLN1-201ENST00000257468 NPSP0C0P6 89 aa12.63□□□□□ -0.39
UBQLN1-201ENST00000257468 PRR9Q5T870 116 aa12.63□□□□□ -0.39
UBQLN1-201ENST00000257468 CNFNQ9BYD5 112 aa12.63□□□□□ -0.39
UBQLN1-201ENST00000257468 A6NDX4 124 aa12.62□□□□□ -0.39
UBQLN1-201ENST00000257468 GATA1P15976 413 aaPredicted RBP12.62□□□□□ -0.39
UBQLN1-201ENST00000257468 EVI2AP22794 236 aa12.62□□□□□ -0.39
UBQLN1-201ENST00000257468 GPHB5Q86YW7 130 aa12.62□□□□□ -0.39
UBQLN1-201ENST00000257468 NDUFS8O00217 210 aa12.62□□□□□ -0.39
UBQLN1-201ENST00000257468 DLEU1O43261 78 aa12.62□□□□□ -0.39
UBQLN1-201ENST00000257468 IGHG2P01859 326 aa12.62□□□□□ -0.39
UBQLN1-201ENST00000257468 WFDC3Q8IUB2 231 aa12.62□□□□□ -0.39
UBQLN1-201ENST00000257468 HIF1ANQ9NWT6 349 aa12.62□□□□□ -0.39
UBQLN1-201ENST00000257468 HSBP1L1C9JCN9 74 aa12.61□□□□□ -0.39
UBQLN1-201ENST00000257468 PF4V1P10720 104 aa12.61□□□□□ -0.39
UBQLN1-201ENST00000257468 SCRT2Q9NQ03 307 aa12.61□□□□□ -0.39
UBQLN1-201ENST00000257468 IGKV3-7A0A075B6H7 116 aa12.6□□□□□ -0.39
UBQLN1-201ENST00000257468 C9orf47Q6ZRZ4 202 aa12.6□□□□□ -0.39
UBQLN1-201ENST00000257468 ZNF738Q8NE65 137 aa12.6□□□□□ -0.39
UBQLN1-201ENST00000257468 HIST1H1AQ02539 215 aaPredicted RBP12.6□□□□□ -0.39
UBQLN1-201ENST00000257468 TMEM95Q3KNT9 176 aa12.6□□□□□ -0.39
UBQLN1-201ENST00000257468 MRPL53Q96EL3 112 aaKnown RBP12.6□□□□□ -0.39
UBQLN1-201ENST00000257468 IGHV7-4-1A0A0J9YVY3 117 aa12.59□□□□□ -0.39
UBQLN1-201ENST00000257468 TCTAP57738 103 aa12.59□□□□□ -0.39
UBQLN1-201ENST00000257468 HBDP02042 147 aa12.59□□□□□ -0.39
UBQLN1-201ENST00000257468 EDN2P20800 178 aa12.59□□□□□ -0.39
UBQLN1-201ENST00000257468 SLC25A34Q6PIV7 304 aa12.59□□□□□ -0.39
UBQLN1-201ENST00000257468 NDUFA4O00483 81 aa12.58□□□□□ -0.4
UBQLN1-201ENST00000257468 SPRY2O43597 315 aa12.58□□□□□ -0.4
UBQLN1-201ENST00000257468 TCF21O43680 179 aa12.58□□□□□ -0.4
UBQLN1-201ENST00000257468 RPL11P62913 178 aaKnown RBP12.58□□□□□ -0.4
UBQLN1-201ENST00000257468 MPV17L2Q567V2 206 aa12.58□□□□□ -0.4
UBQLN1-201ENST00000257468 OR4X2Q8NGF9 303 aa12.58□□□□□ -0.4
UBQLN1-201ENST00000257468 ATP6V0BQ99437 205 aa12.58□□□□□ -0.4
UBQLN1-201ENST00000257468 SNAI2O43623 268 aa12.58□□□□□ -0.4
UBQLN1-201ENST00000257468 CACNG7P62955 275 aa12.58□□□□□ -0.4
UBQLN1-201ENST00000257468 C9orf139Q6ZV77 190 aa12.58□□□□□ -0.4
UBQLN1-201ENST00000257468 MYO18BQ8IUG5 2567 aa12.58□□□□□ -0.4
UBQLN1-201ENST00000257468 FBN2P35556 2912 aa12.57□□□□□ -0.4
UBQLN1-201ENST00000257468 TRAV26-2A0A0B4J265 109 aa12.57□□□□□ -0.4
UBQLN1-201ENST00000257468 TNFRSF6BO95407 300 aa12.57□□□□□ -0.4
UBQLN1-201ENST00000257468 C18orf15Q96N68 181 aa12.57□□□□□ -0.4
UBQLN1-201ENST00000257468 MAP1LC3AQ9H492 121 aa12.57□□□□□ -0.4
UBQLN1-201ENST00000257468 GOLT1BQ9Y3E0 138 aa12.57□□□□□ -0.4
UBQLN1-201ENST00000257468 ACACBO00763 2458 aa12.57□□□□□ -0.4
UBQLN1-201ENST00000257468 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.57□□□□□ -0.48e-7■■■■■ 27.3
UBQLN1-201ENST00000257468 F6UB75 175 aa12.57□□□□□ -0.4
UBQLN1-201ENST00000257468 PRB1P04280 392 aa12.57□□□□□ -0.4
UBQLN1-201ENST00000257468 TM4SF20Q53R12 229 aa12.57□□□□□ -0.4
UBQLN1-201ENST00000257468 MAPK1IP1LQ8NDC0 245 aa12.57□□□□□ -0.4
UBQLN1-201ENST00000257468 H3BVH4 76 aa12.56□□□□□ -0.4
UBQLN1-201ENST00000257468 SOCS3O14543 225 aa12.56□□□□□ -0.4
UBQLN1-201ENST00000257468 USMG5Q96IX5 58 aa12.56□□□□□ -0.4
UBQLN1-201ENST00000257468 NPFFR1Q9GZQ6 430 aa12.56□□□□□ -0.4
UBQLN1-201ENST00000257468 UFC1Q9Y3C8 167 aa12.56□□□□□ -0.4
UBQLN1-201ENST00000257468 CSPG4Q6UVK1 2322 aa12.55□□□□□ -0.4
UBQLN1-201ENST00000257468 SRD5A1P18405 259 aa12.55□□□□□ -0.4
UBQLN1-201ENST00000257468 ANKRD39Q53RE8 183 aa12.55□□□□□ -0.4
UBQLN1-201ENST00000257468 ZANQ9Y493 2812 aa12.55□□□□□ -0.4
UBQLN1-201ENST00000257468 B4DSR2 109 aa12.55□□□□□ -0.4
UBQLN1-201ENST00000257468 GAGE1Q13065 139 aa12.55□□□□□ -0.4
UBQLN1-201ENST00000257468 KIR3DS1Q14943 382 aa12.55□□□□□ -0.4
UBQLN1-201ENST00000257468 ZNF124Q15973 351 aa12.55□□□□□ -0.4
UBQLN1-201ENST00000257468 IFI27L1Q96BM0 104 aa12.55□□□□□ -0.4
UBQLN1-201ENST00000257468 MS4A6AQ9H2W1 248 aa12.55□□□□□ -0.4
UBQLN1-201ENST00000257468 NUDT3O95989 172 aa12.54□□□□□ -0.4
UBQLN1-201ENST00000257468 IGLV1-40P01703 118 aa12.54□□□□□ -0.4
UBQLN1-201ENST00000257468 PPBPP02775 128 aa12.54□□□□□ -0.4
UBQLN1-201ENST00000257468 C10orf99Q6UWK7 81 aa12.54□□□□□ -0.4
UBQLN1-201ENST00000257468 IGHV4-59P01825 116 aa12.54□□□□□ -0.4
UBQLN1-201ENST00000257468 LEPP41159 167 aa12.54□□□□□ -0.4
UBQLN1-201ENST00000257468 ZFAND2AQ8N6M9 145 aa12.54□□□□□ -0.4
UBQLN1-201ENST00000257468 H3BUA1 57 aa12.53□□□□□ -0.4
UBQLN1-201ENST00000257468 SPANXN1Q5VSR9 72 aa12.53□□□□□ -0.4
UBQLN1-201ENST00000257468 SPOCK3Q9BQ16 436 aa12.53□□□□□ -0.4
UBQLN1-201ENST00000257468 RHPN1-AS1Q9BWJ2 59 aa12.53□□□□□ -0.4
UBQLN1-201ENST00000257468 PPP1R14DQ9NXH3 145 aa12.53□□□□□ -0.4
UBQLN1-201ENST00000257468 ZFYVE26Q68DK2 2539 aa12.53□□□□□ -0.4
UBQLN1-201ENST00000257468 POLQO75417 2590 aa12.53□□□□□ -0.4
UBQLN1-201ENST00000257468 LGALS9BQ3B8N2 356 aa12.53□□□□□ -0.4
UBQLN1-201ENST00000257468 LGALS9CQ6DKI2 356 aa12.53□□□□□ -0.4
UBQLN1-201ENST00000257468 ERASQ7Z444 233 aa12.53□□□□□ -0.4
UBQLN1-201ENST00000257468 OR10J6PQ8NGY7 276 aa12.53□□□□□ -0.4
UBQLN1-201ENST00000257468 COX8AP10176 69 aa12.52□□□□□ -0.41
UBQLN1-201ENST00000257468 CFHR3Q02985 330 aa12.52□□□□□ -0.41
UBQLN1-201ENST00000257468 DEFB112Q30KQ8 113 aa12.52□□□□□ -0.41
UBQLN1-201ENST00000257468 DKK2Q9UBU2 259 aa12.52□□□□□ -0.41
UBQLN1-201ENST00000257468 USP24Q9UPU5 2620 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms