RNA–Protein interactions for RNA: ENST00000254325.8

RFX1-201, Transcript of regulatory factor X1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX1, Length 4,332 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-201ENST00000254325 WFDC12Q8WWY7 111 aa12.14□□□□□ -0.47
RFX1-201ENST00000254325 MRPS12O15235 138 aaKnown RBP12.13□□□□□ -0.47
RFX1-201ENST00000254325 MRPL51Q4U2R6 128 aaKnown RBP12.13□□□□□ -0.47
RFX1-201ENST00000254325 ZFAND3Q9H8U3 227 aa12.13□□□□□ -0.47
RFX1-201ENST00000254325 DAZ1Q9NQZ3 744 aaKnown RBP12.13□□□□□ -0.47
RFX1-201ENST00000254325 TRAV21A0A0B4J279 112 aa12.13□□□□□ -0.47
RFX1-201ENST00000254325 PPBPP02775 128 aa12.13□□□□□ -0.47
RFX1-201ENST00000254325 C2orf88Q9BSF0 95 aa12.13□□□□□ -0.47
RFX1-201ENST00000254325 LAMA5O15230 3695 aa12.13□□□□□ -0.47
RFX1-201ENST00000254325 TRBV12-3P01733 135 aa12.13□□□□□ -0.47
RFX1-201ENST00000254325 HBDP02042 147 aa12.13□□□□□ -0.47
RFX1-201ENST00000254325 hDV102S1A0JD36 115 aa12.12□□□□□ -0.47
RFX1-201ENST00000254325 LINC00477Q96M19 166 aa12.12□□□□□ -0.47
RFX1-201ENST00000254325 LRRK2Q5S007 2527 aa12.12□□□□□ -0.47
RFX1-201ENST00000254325 HTN1P15515 57 aa12.12□□□□□ -0.47
RFX1-201ENST00000254325 FAM159AQ6UWV7 190 aa12.12□□□□□ -0.47
RFX1-201ENST00000254325 MEGF9Q9H1U4 602 aa12.12□□□□□ -0.47
RFX1-201ENST00000254325 SMAD7O15105 426 aaKnown RBP12.12□□□□□ -0.47
RFX1-201ENST00000254325 ZNF80P51504 273 aaPredicted RBP12.12□□□□□ -0.47
RFX1-201ENST00000254325 SNRPD3P62318 126 aaKnown RBP12.12□□□□□ -0.47
RFX1-201ENST00000254325 LAMTOR2Q9Y2Q5 125 aa12.12□□□□□ -0.47
RFX1-201ENST00000254325 IGHG2P01859 326 aa12.11□□□□□ -0.47
RFX1-201ENST00000254325 RPL24P83731 157 aaKnown RBP12.11□□□□□ -0.47
RFX1-201ENST00000254325 MYOZ3Q8TDC0 251 aa12.11□□□□□ -0.47
RFX1-201ENST00000254325 UNQ9165/PRO28630Q6UXU0 137 aa12.11□□□□□ -0.47
RFX1-201ENST00000254325 DOPEY1Q5JWR5 2465 aa12.11□□□□□ -0.47
RFX1-201ENST00000254325 LINC00173Q6ZV60 143 aa12.11□□□□□ -0.47
RFX1-201ENST00000254325 RNF114Q9Y508 228 aa12.11□□□□□ -0.47
RFX1-201ENST00000254325 A6NDX4 124 aa12.1□□□□□ -0.47
RFX1-201ENST00000254325 H3BUA1 57 aa12.1□□□□□ -0.47
RFX1-201ENST00000254325 LEPP41159 167 aa12.1□□□□□ -0.47
RFX1-201ENST00000254325 PRSS57Q6UWY2 283 aa12.1□□□□□ -0.47
RFX1-201ENST00000254325 RBAKDNA6NC62 111 aa12.1□□□□□ -0.47
RFX1-201ENST00000254325 NMUP48645 174 aa12.1□□□□□ -0.47
RFX1-201ENST00000254325 MSRB1Q9NZV6 116 aa12.1□□□□□ -0.47
RFX1-201ENST00000254325 SNAI2O43623 268 aa12.1□□□□□ -0.47
RFX1-201ENST00000254325 IGLC3P0DOY3 106 aa12.1□□□□□ -0.47
RFX1-201ENST00000254325 C16orf54Q6UWD8 224 aa12.1□□□□□ -0.47
RFX1-201ENST00000254325 BEX4Q9NWD9 120 aaPredicted RBP12.1□□□□□ -0.47
RFX1-201ENST00000254325 SIGLEC8Q9NYZ4 499 aa12.1□□□□□ -0.47
RFX1-201ENST00000254325 A0A087X0K7 114 aa12.09□□□□□ -0.47
RFX1-201ENST00000254325 ZNF688P0C7X2 276 aa12.09□□□□□ -0.47
RFX1-201ENST00000254325 CACNG7P62955 275 aa12.09□□□□□ -0.47
RFX1-201ENST00000254325 FOXE3Q13461 319 aa12.09□□□□□ -0.47
RFX1-201ENST00000254325 USP9XQ93008 2570 aaPredicted RBP12.09□□□□□ -0.47
RFX1-201ENST00000254325 ZNF462Q96JM2 2506 aa12.09□□□□□ -0.47
RFX1-201ENST00000254325 NPYP01303 97 aa12.09□□□□□ -0.47
RFX1-201ENST00000254325 NXT2Q9NPJ8 142 aaKnown RBP12.09□□□□□ -0.47
RFX1-201ENST00000254325 NUDT3O95989 172 aa12.08□□□□□ -0.48
RFX1-201ENST00000254325 PSMG4Q5JS54 123 aa12.08□□□□□ -0.48
RFX1-201ENST00000254325 IFI27L1Q96BM0 104 aa12.08□□□□□ -0.48
RFX1-201ENST00000254325 POLQO75417 2590 aa12.08□□□□□ -0.48
RFX1-201ENST00000254325 PTPN13Q12923 2485 aa12.08□□□□□ -0.48
RFX1-201ENST00000254325 F6UB75 175 aa12.08□□□□□ -0.48
RFX1-201ENST00000254325 IGHV7-4-1A0A0J9YVY3 117 aa12.07□□□□□ -0.48
RFX1-201ENST00000254325 J3QR89 54 aa12.07□□□□□ -0.48
RFX1-201ENST00000254325 IGLL1P15814 213 aa12.07□□□□□ -0.48
RFX1-201ENST00000254325 DYNLRB2Q8TF09 96 aa12.07□□□□□ -0.48
RFX1-201ENST00000254325 MRPL53Q96EL3 112 aaKnown RBP12.07□□□□□ -0.48
RFX1-201ENST00000254325 AJUBAQ96IF1 538 aa12.07□□□□□ -0.48
RFX1-201ENST00000254325 NUTF2P61970 127 aaKnown RBP12.07□□□□□ -0.48
RFX1-201ENST00000254325 ST20Q9HBF5 79 aa12.07□□□□□ -0.48
RFX1-201ENST00000254325 CCDC168Q8NDH2 2452 aa12.07□□□□□ -0.48
RFX1-201ENST00000254325 J3QLI3 93 aa12.07□□□□□ -0.48
RFX1-201ENST00000254325 K7ERU9 68 aa12.07□□□□□ -0.48
RFX1-201ENST00000254325 TNFRSF6BO95407 300 aa12.07□□□□□ -0.48
RFX1-201ENST00000254325 IGF1P05019 195 aa12.07□□□□□ -0.48
RFX1-201ENST00000254325 SYNJ2BPP57105 145 aa12.07□□□□□ -0.48
RFX1-201ENST00000254325 NOTCH3Q9UM47 2321 aa12.06□□□□□ -0.48
RFX1-201ENST00000254325 ZFHX4Q86UP3 3567 aa12.06□□□□□ -0.48
RFX1-201ENST00000254325 DEFB1P60022 68 aa12.06□□□□□ -0.48
RFX1-201ENST00000254325 SAMD13Q5VXD3 122 aa12.06□□□□□ -0.48
RFX1-201ENST00000254325 TSPOP30536 169 aa12.06□□□□□ -0.48
RFX1-201ENST00000254325 ATP6V0BQ99437 205 aa12.06□□□□□ -0.48
RFX1-201ENST00000254325 CD7P09564 240 aa12.05□□□□□ -0.48
RFX1-201ENST00000254325 FAM74A4Q5TZK3 123 aa12.05□□□□□ -0.48
RFX1-201ENST00000254325 CLPSL1A2RUU4 121 aa12.05□□□□□ -0.48
RFX1-201ENST00000254325 C7orf71A4D174 169 aa12.05□□□□□ -0.48
RFX1-201ENST00000254325 Q96MF0 132 aa12.05□□□□□ -0.48
RFX1-201ENST00000254325 CTRLP40313 264 aa12.05□□□□□ -0.48
RFX1-201ENST00000254325 LINC01559Q495D7 138 aa12.05□□□□□ -0.48
RFX1-201ENST00000254325 FOXC2Q99958 501 aa12.05□□□□□ -0.48
RFX1-201ENST00000254325 SMPXQ9UHP9 88 aa12.05□□□□□ -0.48
RFX1-201ENST00000254325 TLN2Q9Y4G6 2542 aa12.04□□□□□ -0.48
RFX1-201ENST00000254325 Q6ZS46 218 aa12.04□□□□□ -0.48
RFX1-201ENST00000254325 C2orf70A6NJV1 201 aa12.04□□□□□ -0.48
RFX1-201ENST00000254325 AVPP01185 164 aa12.04□□□□□ -0.48
RFX1-201ENST00000254325 C12orf54Q6X4T0 127 aa12.04□□□□□ -0.48
RFX1-201ENST00000254325 C14orf178Q8N769 122 aaPredicted RBP12.04□□□□□ -0.48
RFX1-201ENST00000254325 ERASQ7Z444 233 aa12.03□□□□□ -0.48
RFX1-201ENST00000254325 OR2K2Q8NGT1 345 aa12.03□□□□□ -0.48
RFX1-201ENST00000254325 PIFOQ8TCI5 191 aa12.03□□□□□ -0.48
RFX1-201ENST00000254325 TRAV12-3A0A0B4J271 114 aa12.03□□□□□ -0.48
RFX1-201ENST00000254325 LRBAP50851 2863 aa12.03□□□□□ -0.48
RFX1-201ENST00000254325 SPRY2O43597 315 aa12.03□□□□□ -0.48
RFX1-201ENST00000254325 C9orf47Q6ZRZ4 202 aa12.03□□□□□ -0.48
RFX1-201ENST00000254325 TRAV26-2A0A0B4J265 109 aa12.02□□□□□ -0.48
RFX1-201ENST00000254325 ZNF493Q6ZR52 646 aa12.02□□□□□ -0.48
RFX1-201ENST00000254325 ZNF747Q9BV97 191 aa12.02□□□□□ -0.48
RFX1-201ENST00000254325 HOXA3O43365 443 aaPredicted RBP12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms