RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 SCRT2Q9NQ03 307 aa14.92□□□□□ -0.02
CDC42EP1-201ENST00000249014 A6NDX4 124 aa14.92□□□□□ -0.02
CDC42EP1-201ENST00000249014 IGHG2P01859 326 aa14.92□□□□□ -0.02
CDC42EP1-201ENST00000249014 HIST1H1AQ02539 215 aaPredicted RBP14.92□□□□□ -0.02
CDC42EP1-201ENST00000249014 OR8A1Q8NGG7 326 aa14.92□□□□□ -0.02
CDC42EP1-201ENST00000249014 C16orf92Q96LL3 132 aa14.92□□□□□ -0.02
CDC42EP1-201ENST00000249014 C20orf173Q96LM9 149 aa14.92□□□□□ -0.02
CDC42EP1-201ENST00000249014 BLCAPP62952 87 aa14.91□□□□□ -0.02
CDC42EP1-201ENST00000249014 KLK15Q9H2R5 256 aa14.91□□□□□ -0.02
CDC42EP1-201ENST00000249014 CRYBG3Q68DQ2 2970 aa14.91□□□□□ -0.02
CDC42EP1-201ENST00000249014 MSMBP08118 114 aa14.91□□□□□ -0.02
CDC42EP1-201ENST00000249014 NPSP0C0P6 89 aa14.91□□□□□ -0.02
CDC42EP1-201ENST00000249014 GPHB5Q86YW7 130 aa14.91□□□□□ -0.02
CDC42EP1-201ENST00000249014 HIF1ANQ9NWT6 349 aa14.91□□□□□ -0.02
CDC42EP1-201ENST00000249014 UTP20O75691 2785 aaKnown RBP14.9□□□□□ -0.02
CDC42EP1-201ENST00000249014 IGHV3-11P01762 117 aa14.9□□□□□ -0.02
CDC42EP1-201ENST00000249014 GAGE1Q13065 139 aa14.9□□□□□ -0.02
CDC42EP1-201ENST00000249014 FOXE3Q13461 319 aa14.9□□□□□ -0.02
CDC42EP1-201ENST00000249014 USP9XQ93008 2570 aaPredicted RBP14.9□□□□□ -0.02
CDC42EP1-201ENST00000249014 DOPEY1Q5JWR5 2465 aa14.9□□□□□ -0.02
CDC42EP1-201ENST00000249014 IGHV7-4-1A0A0J9YVY3 117 aa14.89□□□□□ -0.03
CDC42EP1-201ENST00000249014 NDUFA4O00483 81 aa14.89□□□□□ -0.03
CDC42EP1-201ENST00000249014 TCF21O43680 179 aa14.89□□□□□ -0.03
CDC42EP1-201ENST00000249014 AVPP01185 164 aa14.89□□□□□ -0.03
CDC42EP1-201ENST00000249014 HBDP02042 147 aa14.89□□□□□ -0.03
CDC42EP1-201ENST00000249014 SLC25A34Q6PIV7 304 aa14.89□□□□□ -0.03
CDC42EP1-201ENST00000249014 LCNL1Q6ZST4 164 aa14.89□□□□□ -0.03
CDC42EP1-201ENST00000249014 MS4A6AQ9H2W1 248 aa14.89□□□□□ -0.03
CDC42EP1-201ENST00000249014 PRR9Q5T870 116 aa14.88□□□□□ -0.03
CDC42EP1-201ENST00000249014 PPP1R14DQ9NXH3 145 aa14.88□□□□□ -0.03
CDC42EP1-201ENST00000249014 CSMD2Q7Z408 3487 aa14.88□□□□□ -0.03
CDC42EP1-201ENST00000249014 C9orf139Q6ZV77 190 aa14.88□□□□□ -0.03
CDC42EP1-201ENST00000249014 Q6ZVH6 145 aa14.88□□□□□ -0.03
CDC42EP1-201ENST00000249014 BRI3O95415 125 aa14.87□□□□□ -0.03
CDC42EP1-201ENST00000249014 PPBPP02775 128 aa14.87□□□□□ -0.03
CDC42EP1-201ENST00000249014 GATA1P15976 413 aaPredicted RBP14.87□□□□□ -0.03
CDC42EP1-201ENST00000249014 ZNF124Q15973 351 aa14.87□□□□□ -0.03
CDC42EP1-201ENST00000249014 ZNF738Q8NE65 137 aa14.87□□□□□ -0.03
CDC42EP1-201ENST00000249014 NRGNQ92686 78 aa14.87□□□□□ -0.03
CDC42EP1-201ENST00000249014 GOLT1BQ9Y3E0 138 aa14.87□□□□□ -0.03
CDC42EP1-201ENST00000249014 PF4V1P10720 104 aa14.87□□□□□ -0.03
CDC42EP1-201ENST00000249014 EVI2AP22794 236 aa14.87□□□□□ -0.03
CDC42EP1-201ENST00000249014 MPV17L2Q567V2 206 aa14.87□□□□□ -0.03
CDC42EP1-201ENST00000249014 USMG5Q96IX5 58 aa14.87□□□□□ -0.03
CDC42EP1-201ENST00000249014 H3BUA1 57 aa14.86□□□□□ -0.03
CDC42EP1-201ENST00000249014 SOCS3O14543 225 aa14.86□□□□□ -0.03
CDC42EP1-201ENST00000249014 TNFRSF6BO95407 300 aa14.86□□□□□ -0.03
CDC42EP1-201ENST00000249014 MAP1LC3AQ9H492 121 aa14.86□□□□□ -0.03
CDC42EP1-201ENST00000249014 DEFB1P60022 68 aa14.85□□□□□ -0.03
CDC42EP1-201ENST00000249014 OR4X2Q8NGF9 303 aa14.85□□□□□ -0.03
CDC42EP1-201ENST00000249014 CACNG7P62955 275 aa14.85□□□□□ -0.03
CDC42EP1-201ENST00000249014 LINC01546A6NGU7 62 aa14.84□□□□□ -0.03
CDC42EP1-201ENST00000249014 LGALS9BQ3B8N2 356 aa14.84□□□□□ -0.03
CDC42EP1-201ENST00000249014 LGALS9CQ6DKI2 356 aa14.84□□□□□ -0.03
CDC42EP1-201ENST00000249014 IFI27L1Q96BM0 104 aa14.84□□□□□ -0.03
CDC42EP1-201ENST00000249014 IGLV1-40P01703 118 aa14.84□□□□□ -0.03
CDC42EP1-201ENST00000249014 WFDC3Q8IUB2 231 aa14.84□□□□□ -0.03
CDC42EP1-201ENST00000249014 NPFFR1Q9GZQ6 430 aa14.84□□□□□ -0.03
CDC42EP1-201ENST00000249014 J3KRW8 73 aa14.83□□□□□ -0.04
CDC42EP1-201ENST00000249014 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.83□□□□□ -0.041e-8■□□□□ 9.1
CDC42EP1-201ENST00000249014 B4DSR2 109 aa14.83□□□□□ -0.04
CDC42EP1-201ENST00000249014 NUDT3O95989 172 aa14.83□□□□□ -0.04
CDC42EP1-201ENST00000249014 COX8AP10176 69 aa14.83□□□□□ -0.04
CDC42EP1-201ENST00000249014 ANKRD39Q53RE8 183 aa14.82□□□□□ -0.04
CDC42EP1-201ENST00000249014 ZFAND2AQ8N6M9 145 aa14.82□□□□□ -0.04
CDC42EP1-201ENST00000249014 LENEPQ9Y5L5 61 aa14.82□□□□□ -0.04
CDC42EP1-201ENST00000249014 SELENOKQ9Y6D0 94 aa14.82□□□□□ -0.04
CDC42EP1-201ENST00000249014 SNAI2O43623 268 aa14.81□□□□□ -0.04
CDC42EP1-201ENST00000249014 CFHR3Q02985 330 aa14.81□□□□□ -0.04
CDC42EP1-201ENST00000249014 LINC00477Q96M19 166 aa14.81□□□□□ -0.04
CDC42EP1-201ENST00000249014 H3BVH4 76 aa14.81□□□□□ -0.04
CDC42EP1-201ENST00000249014 LEPP41159 167 aa14.81□□□□□ -0.04
CDC42EP1-201ENST00000249014 RPL11P62913 178 aaKnown RBP14.81□□□□□ -0.04
CDC42EP1-201ENST00000249014 TMEM95Q3KNT9 176 aa14.81□□□□□ -0.04
CDC42EP1-201ENST00000249014 TM4SF20Q53R12 229 aa14.81□□□□□ -0.04
CDC42EP1-201ENST00000249014 BVES-AS1Q5T3Y7 98 aa14.81□□□□□ -0.04
CDC42EP1-201ENST00000249014 C18orf15Q96N68 181 aa14.81□□□□□ -0.04
CDC42EP1-201ENST00000249014 COX11Q9Y6N1 276 aa14.81□□□□□ -0.04
CDC42EP1-201ENST00000249014 IGKV3-7A0A075B6H7 116 aa14.8□□□□□ -0.04
CDC42EP1-201ENST00000249014 IGHV4-4A0A075B6R2 117 aa14.8□□□□□ -0.04
CDC42EP1-201ENST00000249014 TRAV26-2A0A0B4J265 109 aa14.8□□□□□ -0.04
CDC42EP1-201ENST00000249014 ORAOV1Q8WV07 137 aa14.8□□□□□ -0.04
CDC42EP1-201ENST00000249014 NXT2Q9NPJ8 142 aaKnown RBP14.8□□□□□ -0.04
CDC42EP1-201ENST00000249014 UFC1Q9Y3C8 167 aa14.8□□□□□ -0.04
CDC42EP1-201ENST00000249014 CSPG4Q6UVK1 2322 aa14.8□□□□□ -0.04
CDC42EP1-201ENST00000249014 IGLV2-18A0A075B6J9 118 aa14.8□□□□□ -0.04
CDC42EP1-201ENST00000249014 F6UB75 175 aa14.8□□□□□ -0.04
CDC42EP1-201ENST00000249014 EDN2P20800 178 aa14.8□□□□□ -0.04
CDC42EP1-201ENST00000249014 SPANXN1Q5VSR9 72 aa14.8□□□□□ -0.04
CDC42EP1-201ENST00000249014 C2orf91Q6ZV80 131 aa14.8□□□□□ -0.04
CDC42EP1-201ENST00000249014 OR10J6PQ8NGY7 276 aa14.8□□□□□ -0.04
CDC42EP1-201ENST00000249014 RHPN1-AS1Q9BWJ2 59 aa14.8□□□□□ -0.04
CDC42EP1-201ENST00000249014 OVOL1O14753 267 aa14.79□□□□□ -0.04
CDC42EP1-201ENST00000249014 FCER1GP30273 86 aa14.79□□□□□ -0.04
CDC42EP1-201ENST00000249014 OR2K2Q8NGT1 345 aa14.79□□□□□ -0.04
CDC42EP1-201ENST00000249014 SPOCK3Q9BQ16 436 aa14.79□□□□□ -0.04
CDC42EP1-201ENST00000249014 A0A0G2JLM5 398 aa14.78□□□□□ -0.04
CDC42EP1-201ENST00000249014 FGF6P10767 208 aa14.78□□□□□ -0.04
CDC42EP1-201ENST00000249014 NRACQ8N912 160 aa14.78□□□□□ -0.04
CDC42EP1-201ENST00000249014 DPF1Q92782 380 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms