RNA–Protein interactions for RNA: ENST00000248054.9

SIN3B-201, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIN3B, Length 5,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-201ENST00000248054 NDUFS7O75251 213 aa12.46□□□□□ -0.41
SIN3B-201ENST00000248054 SFTA2Q6UW10 78 aa12.46□□□□□ -0.41
SIN3B-201ENST00000248054 C10orf105Q8TEF2 133 aa12.46□□□□□ -0.41
SIN3B-201ENST00000248054 CHAC1Q9BUX1 264 aa12.46□□□□□ -0.41
SIN3B-201ENST00000248054 COX8AP10176 69 aa12.46□□□□□ -0.42
SIN3B-201ENST00000248054 CENPVL3A0A0U1RRI6 287 aa12.46□□□□□ -0.42
SIN3B-201ENST00000248054 A0A1W2PPM0 123 aa12.46□□□□□ -0.42
SIN3B-201ENST00000248054 TMEM86BQ8N661 226 aa12.46□□□□□ -0.42
SIN3B-201ENST00000248054 LINC00479Q96M42 142 aa12.46□□□□□ -0.42
SIN3B-201ENST00000248054 TNFRSF6BO95407 300 aa12.45□□□□□ -0.42
SIN3B-201ENST00000248054 IGHV4-39P01824 125 aa12.45□□□□□ -0.42
SIN3B-201ENST00000248054 ELANEP08246 267 aa12.45□□□□□ -0.42
SIN3B-201ENST00000248054 P0C879 139 aa12.45□□□□□ -0.42
SIN3B-201ENST00000248054 ASPHD1Q5U4P2 390 aa12.45□□□□□ -0.42
SIN3B-201ENST00000248054 IGFBPL1Q8WX77 278 aa12.45□□□□□ -0.42
SIN3B-201ENST00000248054 IGHV1-24A0A0C4DH33 117 aa12.45□□□□□ -0.42
SIN3B-201ENST00000248054 ARMS2P0C7Q2 107 aa12.45□□□□□ -0.42
SIN3B-201ENST00000248054 RASL10AQ92737 203 aa12.45□□□□□ -0.42
SIN3B-201ENST00000248054 ABCA4P78363 2273 aa12.45□□□□□ -0.42
SIN3B-201ENST00000248054 SLC25A20O43772 301 aa12.45□□□□□ -0.42
SIN3B-201ENST00000248054 CTRLP40313 264 aa12.45□□□□□ -0.42
SIN3B-201ENST00000248054 ETDBQ3ZM63 59 aa12.45□□□□□ -0.42
SIN3B-201ENST00000248054 ZNF491Q8N8L2 437 aa12.45□□□□□ -0.42
SIN3B-201ENST00000248054 Q8N8P6 123 aa12.45□□□□□ -0.42
SIN3B-201ENST00000248054 LGALS9BQ3B8N2 356 aa12.44□□□□□ -0.42
SIN3B-201ENST00000248054 LGALS9CQ6DKI2 356 aa12.44□□□□□ -0.42
SIN3B-201ENST00000248054 WIPF2Q8TF74 440 aaPredicted RBP12.44□□□□□ -0.42
SIN3B-201ENST00000248054 TEX48A0A1B0GUV7 120 aa12.44□□□□□ -0.42
SIN3B-201ENST00000248054 TP53TG3Q9ULZ0 132 aa12.44□□□□□ -0.42
SIN3B-201ENST00000248054 Q8TAT8 98 aa12.44□□□□□ -0.42
SIN3B-201ENST00000248054 SRD5A1P18405 259 aa12.44□□□□□ -0.42
SIN3B-201ENST00000248054 TMEM141Q96I45 108 aa12.44□□□□□ -0.42
SIN3B-201ENST00000248054 ADARB2-AS1A8MUL3 147 aa12.43□□□□□ -0.42
SIN3B-201ENST00000248054 NEGR1Q7Z3B1 354 aa12.43□□□□□ -0.42
SIN3B-201ENST00000248054 KLHL30-AS1Q8NEE0 82 aa12.43□□□□□ -0.42
SIN3B-201ENST00000248054 EML6Q6ZMW3 1958 aa12.43□□□□□ -0.42
SIN3B-201ENST00000248054 IGLV2-23P01705 113 aa12.43□□□□□ -0.42
SIN3B-201ENST00000248054 ZNF688P0C7X2 276 aa12.43□□□□□ -0.42
SIN3B-201ENST00000248054 RPL36AP83881 106 aaKnown RBP12.43□□□□□ -0.42
SIN3B-201ENST00000248054 ZNF876PQ49A33 203 aa12.43□□□□□ -0.42
SIN3B-201ENST00000248054 FAM120AOSQ5T036 256 aa12.43□□□□□ -0.42
SIN3B-201ENST00000248054 RPL36ALQ969Q0 106 aaKnown RBP12.43□□□□□ -0.42
SIN3B-201ENST00000248054 GAGE2BQ13066 116 aa12.43□□□□□ -0.42
SIN3B-201ENST00000248054 GAGE2EQ4V326 116 aa12.43□□□□□ -0.42
SIN3B-201ENST00000248054 GAGE2DQ9UEU5 116 aa12.43□□□□□ -0.42
SIN3B-201ENST00000248054 FXYD7P58549 80 aa12.42□□□□□ -0.42
SIN3B-201ENST00000248054 ZFAND6Q6FIF0 208 aa12.42□□□□□ -0.42
SIN3B-201ENST00000248054 Q6ZPA2 131 aa12.42□□□□□ -0.42
SIN3B-201ENST00000248054 MED12LQ86YW9 2145 aa12.42□□□□□ -0.42
SIN3B-201ENST00000248054 IGHV4-61A0A0C4DH41 118 aa12.42□□□□□ -0.42
SIN3B-201ENST00000248054 CLUHP3Q96NS8 147 aa12.42□□□□□ -0.42
SIN3B-201ENST00000248054 BOD1L2Q8IYS8 172 aa12.42□□□□□ -0.42
SIN3B-201ENST00000248054 I3L2K1 104 aa12.42□□□□□ -0.42
SIN3B-201ENST00000248054 PRSS57Q6UWY2 283 aa12.42□□□□□ -0.42
SIN3B-201ENST00000248054 MRPL53Q96EL3 112 aaKnown RBP12.42□□□□□ -0.42
SIN3B-201ENST00000248054 TP73-AS1Q9UF72 201 aa12.42□□□□□ -0.42
SIN3B-201ENST00000248054 TRGV4A0A0C4DH28 118 aa12.41□□□□□ -0.42
SIN3B-201ENST00000248054 LCNL1Q6ZST4 164 aa12.41□□□□□ -0.42
SIN3B-201ENST00000248054 PRADC1Q9BSG0 188 aa12.41□□□□□ -0.42
SIN3B-201ENST00000248054 TRPT1Q86TN4 253 aaKnown RBP12.41□□□□□ -0.42
SIN3B-201ENST00000248054 RNF114Q9Y508 228 aa12.41□□□□□ -0.42
SIN3B-201ENST00000248054 TRAV26-1A0A087WT03 109 aa12.41□□□□□ -0.42
SIN3B-201ENST00000248054 MYMXA0A1B0GTQ4 84 aa12.41□□□□□ -0.42
SIN3B-201ENST00000248054 LINC01619G3V211 115 aa12.41□□□□□ -0.42
SIN3B-201ENST00000248054 MALP21145 153 aa12.41□□□□□ -0.42
SIN3B-201ENST00000248054 DEFB113Q30KQ7 82 aa12.41□□□□□ -0.42
SIN3B-201ENST00000248054 IGLV11-55A0A075B6I3 123 aa12.4□□□□□ -0.42
SIN3B-201ENST00000248054 FCN3O75636 299 aa12.4□□□□□ -0.42
SIN3B-201ENST00000248054 AKAP6Q13023 2319 aa12.4□□□□□ -0.42
SIN3B-201ENST00000248054 SIVA1O15304 175 aa12.4□□□□□ -0.42
SIN3B-201ENST00000248054 TAL2Q16559 108 aa12.4□□□□□ -0.42
SIN3B-201ENST00000248054 IL17RELQ6ZVW7 336 aa12.4□□□□□ -0.42
SIN3B-201ENST00000248054 WNK2Q9Y3S1 2297 aa12.4□□□□□ -0.42
SIN3B-201ENST00000248054 C8orf86Q6ZUL3 223 aa12.4□□□□□ -0.42
SIN3B-201ENST00000248054 LY6G5BQ8NDX9 201 aa12.4□□□□□ -0.42
SIN3B-201ENST00000248054 VPREB3Q9UKI3 123 aa12.4□□□□□ -0.42
SIN3B-201ENST00000248054 SYNJ2BPP57105 145 aa12.4□□□□□ -0.42
SIN3B-201ENST00000248054 C14orf178Q8N769 122 aaPredicted RBP12.4□□□□□ -0.42
SIN3B-201ENST00000248054 C1QTNF4Q9BXJ3 329 aa12.4□□□□□ -0.42
SIN3B-201ENST00000248054 SPANXDQ9BXN6 97 aa12.4□□□□□ -0.42
SIN3B-201ENST00000248054 TRBV20-1A0A075B6N2 111 aa12.39□□□□□ -0.43
SIN3B-201ENST00000248054 IGHV7-81A0A0B4J1V7 117 aa12.39□□□□□ -0.43
SIN3B-201ENST00000248054 CRYGCP07315 174 aa12.39□□□□□ -0.43
SIN3B-201ENST00000248054 KLF5Q13887 457 aaPredicted RBP12.39□□□□□ -0.43
SIN3B-201ENST00000248054 PRR25Q96S07 402 aa12.39□□□□□ -0.43
SIN3B-201ENST00000248054 TMEM95Q3KNT9 176 aa12.39□□□□□ -0.43
SIN3B-201ENST00000248054 LINC00173Q6ZV60 143 aa12.39□□□□□ -0.43
SIN3B-201ENST00000248054 Q8N7P7 452 aa12.39□□□□□ -0.43
SIN3B-201ENST00000248054 SS18L2Q9UHA2 77 aa12.39□□□□□ -0.43
SIN3B-201ENST00000248054 HTTP42858 3142 aa12.39□□□□□ -0.43
SIN3B-201ENST00000248054 RHODO00212 210 aa12.39□□□□□ -0.43
SIN3B-201ENST00000248054 S100A7L2Q5SY68 101 aa12.39□□□□□ -0.43
SIN3B-201ENST00000248054 SIRPDQ9H106 197 aa12.39□□□□□ -0.43
SIN3B-201ENST00000248054 CRYBA4P53673 196 aa12.38□□□□□ -0.43
SIN3B-201ENST00000248054 K7EIM0 57 aa12.38□□□□□ -0.43
SIN3B-201ENST00000248054 SRSF2Q01130 221 aaKnown RBP12.38□□□□□ -0.43
SIN3B-201ENST00000248054 EIF4EBP1Q13541 118 aaPredicted RBP12.38□□□□□ -0.43
SIN3B-201ENST00000248054 PGPEP1Q9NXJ5 209 aa12.38□□□□□ -0.43
SIN3B-201ENST00000248054 IGHV4-30-2A0A087WSY4 118 aa12.38□□□□□ -0.43
SIN3B-201ENST00000248054 SSBP2P81877 361 aaPredicted RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms