RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 IMUPQ9GZP8 106 aa10.12□□□□□ -0.79
MSH2-201ENST00000233146 FRYQ5TBA9 3013 aa10.11□□□□□ -0.79
MSH2-201ENST00000233146 A0A0J9YY99 117 aa10.11□□□□□ -0.79
MSH2-201ENST00000233146 PRB4P10163 310 aaPredicted RBP10.11□□□□□ -0.79
MSH2-201ENST00000233146 TMEM240Q5SV17 173 aa10.11□□□□□ -0.79
MSH2-201ENST00000233146 TDHQ8IZJ6 230 aa10.11□□□□□ -0.79
MSH2-201ENST00000233146 TRBV19A0A075B6N1 114 aa10.11□□□□□ -0.79
MSH2-201ENST00000233146 LMO7DNF2Z398 122 aa10.11□□□□□ -0.79
MSH2-201ENST00000233146 CD3EP07766 207 aa10.11□□□□□ -0.79
MSH2-201ENST00000233146 C17orf58Q2M2W7 97 aa10.11□□□□□ -0.79
MSH2-201ENST00000233146 ZNF672Q499Z4 452 aaPredicted RBP10.11□□□□□ -0.79
MSH2-201ENST00000233146 ZNF575Q86XF7 245 aa10.11□□□□□ -0.79
MSH2-201ENST00000233146 SPANXDQ9BXN6 97 aa10.11□□□□□ -0.79
MSH2-201ENST00000233146 CNFNQ9BYD5 112 aa10.11□□□□□ -0.79
MSH2-201ENST00000233146 TRBV10-2A0A0K0K1G8 114 aa10.1□□□□□ -0.79
MSH2-201ENST00000233146 CEMP1Q6PRD7 247 aaPredicted RBP10.1□□□□□ -0.79
MSH2-201ENST00000233146 SIGLEC15Q6ZMC9 328 aa10.1□□□□□ -0.79
MSH2-201ENST00000233146 CXXC4Q9H2H0 198 aa10.1□□□□□ -0.79
MSH2-201ENST00000233146 RIF1Q5UIP0 2472 aaKnown RBP10.1□□□□□ -0.79
MSH2-201ENST00000233146 MRPL14Q6P1L8 145 aaKnown RBP10.1□□□□□ -0.79
MSH2-201ENST00000233146 C17orf77Q96MU5 243 aa10.1□□□□□ -0.79
MSH2-201ENST00000233146 SCRG1O75711 98 aa10.1□□□□□ -0.79
MSH2-201ENST00000233146 EGR2P11161 476 aaPredicted RBP10.1□□□□□ -0.79
MSH2-201ENST00000233146 PMVKQ15126 192 aa10.1□□□□□ -0.79
MSH2-201ENST00000233146 ATXN8Q156A1 80 aa10.1□□□□□ -0.79
MSH2-201ENST00000233146 KIR2DL5BQ8NHK3 375 aa10.1□□□□□ -0.79
MSH2-201ENST00000233146 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.09□□□□□ -0.79
MSH2-201ENST00000233146 IGHV3-33P01772 117 aa10.09□□□□□ -0.79
MSH2-201ENST00000233146 COX8CQ7Z4L0 72 aa10.09□□□□□ -0.79
MSH2-201ENST00000233146 GVINP1Q7Z2Y8 2422 aa10.09□□□□□ -0.79
MSH2-201ENST00000233146 GPR179Q6PRD1 2367 aa10.09□□□□□ -0.79
MSH2-201ENST00000233146 IGKV1D-17A0A075B6S4 117 aa10.09□□□□□ -0.79
MSH2-201ENST00000233146 K7ESF4 209 aa10.09□□□□□ -0.79
MSH2-201ENST00000233146 TM4SF5O14894 197 aa10.09□□□□□ -0.79
MSH2-201ENST00000233146 LYPD1Q8N2G4 141 aa10.09□□□□□ -0.79
MSH2-201ENST00000233146 NEXN-AS1Q8NBZ9 246 aa10.09□□□□□ -0.79
MSH2-201ENST00000233146 KLHL30-AS1Q8NEE0 82 aa10.09□□□□□ -0.79
MSH2-201ENST00000233146 MRAPQ8TCY5 172 aa10.09□□□□□ -0.79
MSH2-201ENST00000233146 IMMP1LQ96LU5 166 aa10.09□□□□□ -0.79
MSH2-201ENST00000233146 IGFBPL1Q8WX77 278 aa10.09□□□□□ -0.79
MSH2-201ENST00000233146 DUX5Q96PT3 197 aa10.09□□□□□ -0.79
MSH2-201ENST00000233146 PSMG3-AS1Q96PY0 264 aa10.09□□□□□ -0.79
MSH2-201ENST00000233146 DTX2Q86UW9 622 aa10.08□□□□□ -0.8
MSH2-201ENST00000233146 ELANEP08246 267 aa10.08□□□□□ -0.8
MSH2-201ENST00000233146 DEFB121Q5J5C9 76 aa10.08□□□□□ -0.8
MSH2-201ENST00000233146 C10orf55Q5SWW7 151 aa10.08□□□□□ -0.8
MSH2-201ENST00000233146 MRPS21P82921 87 aaKnown RBP10.07□□□□□ -0.8
MSH2-201ENST00000233146 EIF4EBP3O60516 100 aaPredicted RBP10.07□□□□□ -0.8
MSH2-201ENST00000233146 CD40P25942 277 aa10.07□□□□□ -0.8
MSH2-201ENST00000233146 SLC25A29Q8N8R3 303 aa10.07□□□□□ -0.8
MSH2-201ENST00000233146 C3orf36Q3SXR2 165 aa10.07□□□□□ -0.8
MSH2-201ENST00000233146 PVRIGQ6DKI7 326 aa10.07□□□□□ -0.8
MSH2-201ENST00000233146 Q6ZS46 218 aa10.07□□□□□ -0.8
MSH2-201ENST00000233146 NRACQ8N912 160 aa10.07□□□□□ -0.8
MSH2-201ENST00000233146 M0R3E3 92 aa10.06□□□□□ -0.8
MSH2-201ENST00000233146 LINC01565O15544 149 aa10.06□□□□□ -0.8
MSH2-201ENST00000233146 LYZP61626 148 aa10.06□□□□□ -0.8
MSH2-201ENST00000233146 TMEM167AQ8TBQ9 72 aa10.06□□□□□ -0.8
MSH2-201ENST00000233146 KLF14Q8TD94 323 aaPredicted RBP10.06□□□□□ -0.8
MSH2-201ENST00000233146 EPOPA6NHQ4 379 aa10.06□□□□□ -0.8
MSH2-201ENST00000233146 CRYGAP11844 174 aa10.06□□□□□ -0.8
MSH2-201ENST00000233146 UCNP55089 124 aa10.06□□□□□ -0.8
MSH2-201ENST00000233146 GAGE2AQ6NT46 116 aa10.06□□□□□ -0.8
MSH2-201ENST00000233146 TMEM263Q8WUH6 116 aaKnown RBP10.06□□□□□ -0.8
MSH2-201ENST00000233146 DSCAML1Q8TD84 2053 aa10.06□□□□□ -0.8
MSH2-201ENST00000233146 IGLV3-19P01714 112 aa10.05□□□□□ -0.8
MSH2-201ENST00000233146 ATP5G1P05496 136 aa10.05□□□□□ -0.8
MSH2-201ENST00000233146 ZNRF1Q8ND25 227 aa10.05□□□□□ -0.8
MSH2-201ENST00000233146 RPUSD1Q9UJJ7 312 aaKnown RBP10.05□□□□□ -0.8
MSH2-201ENST00000233146 COX6A1P12074 109 aa10.05□□□□□ -0.8
MSH2-201ENST00000233146 ARFGEF3Q5TH69 2177 aa10.05□□□□□ -0.8
MSH2-201ENST00000233146 COX7CP15954 63 aa10.05□□□□□ -0.8
MSH2-201ENST00000233146 DUX3Q96PT4 197 aa10.05□□□□□ -0.8
MSH2-201ENST00000233146 SRSF2Q01130 221 aaKnown RBP10.04□□□□□ -0.8
MSH2-201ENST00000233146 TCF15Q12870 199 aa10.04□□□□□ -0.8
MSH2-201ENST00000233146 C4orf26Q17RF5 130 aa10.04□□□□□ -0.8
MSH2-201ENST00000233146 C2orf82Q6UX34 121 aa10.04□□□□□ -0.8
MSH2-201ENST00000233146 SCNM1Q9BWG6 230 aa10.04□□□□□ -0.8
MSH2-201ENST00000233146 LINC00527Q9UJ94 153 aa10.04□□□□□ -0.8
MSH2-201ENST00000233146 CNOT1A5YKK6 2376 aaKnown RBP10.04□□□□□ -0.8
MSH2-201ENST00000233146 A0A1W2PR77 199 aa10.04□□□□□ -0.8
MSH2-201ENST00000233146 F8WDY8 70 aa10.04□□□□□ -0.8
MSH2-201ENST00000233146 IGHV4-39P01824 125 aa10.04□□□□□ -0.8
MSH2-201ENST00000233146 ZNF80P51504 273 aaPredicted RBP10.04□□□□□ -0.8
MSH2-201ENST00000233146 TMEM170BQ5T4T1 132 aa10.04□□□□□ -0.8
MSH2-201ENST00000233146 SCGB3A1Q96QR1 104 aa10.04□□□□□ -0.8
MSH2-201ENST00000233146 CDX4O14627 284 aaPredicted RBP10.04□□□□□ -0.8
MSH2-201ENST00000233146 ZNF22P17026 224 aaPredicted RBP10.04□□□□□ -0.8
MSH2-201ENST00000233146 C2orf48Q96LS8 159 aa10.04□□□□□ -0.8
MSH2-201ENST00000233146 CACNA1EQ15878 2313 aa10.03□□□□□ -0.8
MSH2-201ENST00000233146 OVOL1O14753 267 aa10.03□□□□□ -0.8
MSH2-201ENST00000233146 PLGLAQ15195 96 aa10.03□□□□□ -0.8
MSH2-201ENST00000233146 TOMM6Q96B49 74 aa10.03□□□□□ -0.8
MSH2-201ENST00000233146 TRAV17A0A0B4J275 112 aa10.03□□□□□ -0.8
MSH2-201ENST00000233146 A0A0B4J2C4 111 aa10.03□□□□□ -0.8
MSH2-201ENST00000233146 DPH3Q96FX2 82 aa10.03□□□□□ -0.8
MSH2-201ENST00000233146 ZNRD1Q9P1U0 126 aa10.03□□□□□ -0.8
MSH2-201ENST00000233146 H7C423 109 aa10.02□□□□□ -0.8
MSH2-201ENST00000233146 HCP5Q6MZN7 132 aa10.02□□□□□ -0.8
MSH2-201ENST00000233146 IGHV3-21A0A0B4J1V1 117 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms