RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 MAP1LC3AQ9H492 121 aa11.11□□□□□ -0.63
PCDHB3-201ENST00000231130 MRPL35Q9NZE8 188 aaKnown RBP11.11□□□□□ -0.63
PCDHB3-201ENST00000231130 IGKV1-17P01599 117 aa11.11□□□□□ -0.63
PCDHB3-201ENST00000231130 HES1Q14469 280 aa11.11□□□□□ -0.63
PCDHB3-201ENST00000231130 FAM215AQ9Y5M1 114 aa11.11□□□□□ -0.63
PCDHB3-201ENST00000231130 VSTM5A8MXK1 200 aa11.1□□□□□ -0.63
PCDHB3-201ENST00000231130 HLA-DMBP28068 263 aa11.1□□□□□ -0.63
PCDHB3-201ENST00000231130 ODF1Q14990 250 aa11.1□□□□□ -0.63
PCDHB3-201ENST00000231130 PPDPFLQ8WWR9 84 aa11.1□□□□□ -0.63
PCDHB3-201ENST00000231130 AAMDCQ9H7C9 122 aa11.1□□□□□ -0.63
PCDHB3-201ENST00000231130 PRO0461Q9UI25 63 aa11.1□□□□□ -0.63
PCDHB3-201ENST00000231130 IGHV3OR16-13A0A075B7E8 117 aa11.1□□□□□ -0.63
PCDHB3-201ENST00000231130 IGHV3-74A0A0B4J1X5 117 aa11.1□□□□□ -0.63
PCDHB3-201ENST00000231130 SH2D1AO60880 128 aa11.1□□□□□ -0.63
PCDHB3-201ENST00000231130 CRYGCP07315 174 aa11.1□□□□□ -0.63
PCDHB3-201ENST00000231130 MRGPRG-AS1Q2M3A8 158 aa11.1□□□□□ -0.63
PCDHB3-201ENST00000231130 TMEM158Q8WZ71 300 aa11.1□□□□□ -0.63
PCDHB3-201ENST00000231130 IGHV1-8P0DP01 117 aa11.1□□□□□ -0.63
PCDHB3-201ENST00000231130 H7C2G1 150 aa11.09□□□□□ -0.63
PCDHB3-201ENST00000231130 BSPH1Q075Z2 132 aa11.09□□□□□ -0.63
PCDHB3-201ENST00000231130 LOXP28300 417 aaPredicted RBP11.09□□□□□ -0.63
PCDHB3-201ENST00000231130 ADIPOQQ15848 244 aa11.09□□□□□ -0.63
PCDHB3-201ENST00000231130 SIGLEC15Q6ZMC9 328 aa11.09□□□□□ -0.63
PCDHB3-201ENST00000231130 RNF125Q96EQ8 232 aa11.09□□□□□ -0.63
PCDHB3-201ENST00000231130 HHLA3Q9XRX5 114 aa11.09□□□□□ -0.63
PCDHB3-201ENST00000231130 TLN1Q9Y490 2541 aaKnown RBP11.09□□□□□ -0.63
PCDHB3-201ENST00000231130 ID1P41134 155 aa11.08□□□□□ -0.64
PCDHB3-201ENST00000231130 TEX36Q5VZQ5 186 aa11.08□□□□□ -0.64
PCDHB3-201ENST00000231130 MYOZ3Q8TDC0 251 aa11.08□□□□□ -0.64
PCDHB3-201ENST00000231130 LINC00574Q9H8X3 128 aa11.08□□□□□ -0.64
PCDHB3-201ENST00000231130 A8MWV9 139 aa11.08□□□□□ -0.64
PCDHB3-201ENST00000231130 TMEM178BH3BS89 294 aa11.08□□□□□ -0.64
PCDHB3-201ENST00000231130 WI2-2373I1.2A0A1W2PRP0 233 aa11.08□□□□□ -0.64
PCDHB3-201ENST00000231130 HLA-DRB4P13762 266 aa11.08□□□□□ -0.64
PCDHB3-201ENST00000231130 SMCPP49901 116 aaPredicted RBP11.08□□□□□ -0.64
PCDHB3-201ENST00000231130 HLA-DRB4X5D2U9 266 aa11.08□□□□□ -0.64
PCDHB3-201ENST00000231130 MBD3L4A6NDZ8 208 aaPredicted RBP11.07□□□□□ -0.64
PCDHB3-201ENST00000231130 MBD3L3A6NE82 208 aaPredicted RBP11.07□□□□□ -0.64
PCDHB3-201ENST00000231130 MBD3L5A6NJ08 208 aaPredicted RBP11.07□□□□□ -0.64
PCDHB3-201ENST00000231130 DEFB124Q8NES8 71 aa11.07□□□□□ -0.64
PCDHB3-201ENST00000231130 MBD3L2Q8NHZ7 208 aaPredicted RBP11.07□□□□□ -0.64
PCDHB3-201ENST00000231130 IGHV3-66A0A0C4DH42 116 aa11.07□□□□□ -0.64
PCDHB3-201ENST00000231130 ZNF688P0C7X2 276 aa11.07□□□□□ -0.64
PCDHB3-201ENST00000231130 EGR2P11161 476 aaPredicted RBP11.07□□□□□ -0.64
PCDHB3-201ENST00000231130 OTOGLQ3ZCN5 2332 aa11.07□□□□□ -0.64
PCDHB3-201ENST00000231130 IGHV1-3A0A0C4DH29 117 aa11.07□□□□□ -0.64
PCDHB3-201ENST00000231130 CFAP126Q5VTH2 177 aa11.07□□□□□ -0.64
PCDHB3-201ENST00000231130 TEX22C9J3V5 150 aa11.06□□□□□ -0.64
PCDHB3-201ENST00000231130 INS-IGF2F8WCM5 200 aa11.06□□□□□ -0.64
PCDHB3-201ENST00000231130 OVOL3O00110 214 aa11.06□□□□□ -0.64
PCDHB3-201ENST00000231130 DEFB104AQ8WTQ1 72 aa11.06□□□□□ -0.64
PCDHB3-201ENST00000231130 VKORC1Q9BQB6 163 aa11.06□□□□□ -0.64
PCDHB3-201ENST00000231130 K7EM74 188 aa11.06□□□□□ -0.64
PCDHB3-201ENST00000231130 FAM159AQ6UWV7 190 aa11.06□□□□□ -0.64
PCDHB3-201ENST00000231130 ZNF491Q8N8L2 437 aa11.06□□□□□ -0.64
PCDHB3-201ENST00000231130 FAM110AQ9BQ89 295 aa11.06□□□□□ -0.64
PCDHB3-201ENST00000231130 SHANK2-AS3Q9BTD1 123 aa11.06□□□□□ -0.64
PCDHB3-201ENST00000231130 DCHS2Q6V1P9 2916 aa11.06□□□□□ -0.64
PCDHB3-201ENST00000231130 ANKHD1Q8IWZ3 2542 aaKnown RBP11.05□□□□□ -0.64
PCDHB3-201ENST00000231130 COL6A6A6NMZ7 2263 aa11.05□□□□□ -0.64
PCDHB3-201ENST00000231130 J3KRW8 73 aa11.05□□□□□ -0.64
PCDHB3-201ENST00000231130 ZNF883P0CG24 379 aa11.05□□□□□ -0.64
PCDHB3-201ENST00000231130 ZNF80P51504 273 aaPredicted RBP11.05□□□□□ -0.64
PCDHB3-201ENST00000231130 CARD19Q96LW7 228 aa11.05□□□□□ -0.64
PCDHB3-201ENST00000231130 ONECUT1Q9UBC0 465 aa11.05□□□□□ -0.64
PCDHB3-201ENST00000231130 AKAP13Q12802 2813 aa11.05□□□□□ -0.64
PCDHB3-201ENST00000231130 MAP1AP78559 2803 aaPredicted RBP11.05□□□□□ -0.64
PCDHB3-201ENST00000231130 IGHV3-49A0A0A0MS15 119 aa11.05□□□□□ -0.64
PCDHB3-201ENST00000231130 I3L2K1 104 aa11.05□□□□□ -0.64
PCDHB3-201ENST00000231130 NDUFV3P56181 108 aaKnown RBP11.05□□□□□ -0.64
PCDHB3-201ENST00000231130 TMEM30BQ3MIR4 351 aa11.05□□□□□ -0.64
PCDHB3-201ENST00000231130 TEN1Q86WV5 123 aa11.05□□□□□ -0.64
PCDHB3-201ENST00000231130 CEP295Q9C0D2 2601 aa11.05□□□□□ -0.64
PCDHB3-201ENST00000231130 ERCC8Q13216 396 aa11.04□□□□□ -0.64
PCDHB3-201ENST00000231130 MEIG1Q5JSS6 88 aa11.04□□□□□ -0.64
PCDHB3-201ENST00000231130 SPRY2O43597 315 aa11.04□□□□□ -0.64
PCDHB3-201ENST00000231130 IFITM1P13164 125 aa11.04□□□□□ -0.64
PCDHB3-201ENST00000231130 TRAV26-2A0A0B4J265 109 aa11.03□□□□□ -0.64
PCDHB3-201ENST00000231130 TRAV4A0A0B4J268 109 aa11.03□□□□□ -0.64
PCDHB3-201ENST00000231130 FABP5P3A8MUU1 101 aa11.03□□□□□ -0.64
PCDHB3-201ENST00000231130 TIMM23O14925 209 aa11.03□□□□□ -0.64
PCDHB3-201ENST00000231130 EFNA4P52798 201 aa11.03□□□□□ -0.64
PCDHB3-201ENST00000231130 CUL9Q8IWT3 2517 aa11.03□□□□□ -0.64
PCDHB3-201ENST00000231130 TMEM262E9PQX1 116 aa11.03□□□□□ -0.64
PCDHB3-201ENST00000231130 K7EIM0 57 aa11.03□□□□□ -0.64
PCDHB3-201ENST00000231130 LY6HO94772 140 aa11.03□□□□□ -0.64
PCDHB3-201ENST00000231130 TMEM155Q4W5P6 130 aa11.03□□□□□ -0.64
PCDHB3-201ENST00000231130 ANKRD29Q8N6D5 301 aa11.03□□□□□ -0.64
PCDHB3-201ENST00000231130 ATP5LO75964 103 aa11.03□□□□□ -0.64
PCDHB3-201ENST00000231130 MORN3Q6PF18 240 aaPredicted RBP11.03□□□□□ -0.64
PCDHB3-201ENST00000231130 COL27A1Q8IZC6 1860 aaPredicted RBP11.03□□□□□ -0.64
PCDHB3-201ENST00000231130 AJUBAQ96IF1 538 aa11.02□□□□□ -0.64
PCDHB3-201ENST00000231130 YAE1D1Q9NRH1 226 aa11.02□□□□□ -0.64
PCDHB3-201ENST00000231130 TMEM14CQ9P0S9 112 aa11.02□□□□□ -0.64
PCDHB3-201ENST00000231130 H3BRN7 92 aa11.02□□□□□ -0.65
PCDHB3-201ENST00000231130 TNFRSF6BO95407 300 aa11.02□□□□□ -0.65
PCDHB3-201ENST00000231130 BRI3O95415 125 aa11.02□□□□□ -0.65
PCDHB3-201ENST00000231130 RAXQ9Y2V3 346 aa11.02□□□□□ -0.65
PCDHB3-201ENST00000231130 ZNF815PA8K554 130 aa11.01□□□□□ -0.65
PCDHB3-201ENST00000231130 C9JAW5 83 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms