RNA–Protein interactions for RNA: ENST00000229239.9

GAPDH-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-201ENST00000229239 MIEN1Q9BRT3 115 aa12.91□□□□□ -0.34
GAPDH-201ENST00000229239 CNFNQ9BYD5 112 aa12.91□□□□□ -0.34
GAPDH-201ENST00000229239 BLCAPP62952 87 aa12.9□□□□□ -0.34
GAPDH-201ENST00000229239 SAMD13Q5VXD3 122 aa12.9□□□□□ -0.34
GAPDH-201ENST00000229239 KLHDC1Q8N7A1 406 aa12.9□□□□□ -0.34
GAPDH-201ENST00000229239 RNF114Q9Y508 228 aa12.9□□□□□ -0.34
GAPDH-201ENST00000229239 HIVEP2P31629 2446 aa12.9□□□□□ -0.34
GAPDH-201ENST00000229239 PRAC2D3DTV9 90 aa12.89□□□□□ -0.35
GAPDH-201ENST00000229239 PF4V1P10720 104 aa12.89□□□□□ -0.35
GAPDH-201ENST00000229239 ZNF80P51504 273 aaPredicted RBP12.89□□□□□ -0.35
GAPDH-201ENST00000229239 FAM104BQ5XKR9 115 aa12.89□□□□□ -0.35
GAPDH-201ENST00000229239 RNF182Q8N6D2 247 aa12.89□□□□□ -0.35
GAPDH-201ENST00000229239 C16orf92Q96LL3 132 aa12.89□□□□□ -0.35
GAPDH-201ENST00000229239 TPPP3Q9BW30 176 aa12.89□□□□□ -0.35
GAPDH-201ENST00000229239 U3KQK5 164 aa12.89□□□□□ -0.35
GAPDH-201ENST00000229239 CRXO43186 299 aaPredicted RBP12.89□□□□□ -0.35
GAPDH-201ENST00000229239 ZNF207O43670 478 aaKnown RBP12.89□□□□□ -0.35
GAPDH-201ENST00000229239 KRTAP1-1Q07627 177 aa12.89□□□□□ -0.35
GAPDH-201ENST00000229239 KRTAP21-3Q3LHN1 58 aa12.89□□□□□ -0.35
GAPDH-201ENST00000229239 OR4X2Q8NGF9 303 aa12.89□□□□□ -0.35
GAPDH-201ENST00000229239 NPFFR1Q9GZQ6 430 aa12.89□□□□□ -0.35
GAPDH-201ENST00000229239 OVOL1O14753 267 aa12.88□□□□□ -0.35
GAPDH-201ENST00000229239 ORM1P02763 201 aa12.88□□□□□ -0.35
GAPDH-201ENST00000229239 ERCC8Q13216 396 aa12.88□□□□□ -0.35
GAPDH-201ENST00000229239 C2orf88Q9BSF0 95 aa12.88□□□□□ -0.35
GAPDH-201ENST00000229239 TMEM70Q9BUB7 260 aa12.88□□□□□ -0.35
GAPDH-201ENST00000229239 AGPAT4-IT1Q9H0P7 198 aa12.88□□□□□ -0.35
GAPDH-201ENST00000229239 HSPB8Q9UJY1 196 aa12.88□□□□□ -0.35
GAPDH-201ENST00000229239 IGHV3OR16-13A0A075B7E8 117 aa12.87□□□□□ -0.35
GAPDH-201ENST00000229239 IGHV3-74A0A0B4J1X5 117 aa12.87□□□□□ -0.35
GAPDH-201ENST00000229239 C2orf70A6NJV1 201 aa12.87□□□□□ -0.35
GAPDH-201ENST00000229239 K7EMT4 169 aa12.87□□□□□ -0.35
GAPDH-201ENST00000229239 PRB4P10163 310 aaPredicted RBP12.87□□□□□ -0.35
GAPDH-201ENST00000229239 ORMDL3Q8N138 153 aa12.87□□□□□ -0.35
GAPDH-201ENST00000229239 LINC00477Q96M19 166 aa12.87□□□□□ -0.35
GAPDH-201ENST00000229239 TMSB15BA0A087X1C1 80 aa12.87□□□□□ -0.35
GAPDH-201ENST00000229239 IGHV3-49A0A0A0MS15 119 aa12.87□□□□□ -0.35
GAPDH-201ENST00000229239 IGHV1-24A0A0C4DH33 117 aa12.87□□□□□ -0.35
GAPDH-201ENST00000229239 LEPROTL1O95214 131 aa12.87□□□□□ -0.35
GAPDH-201ENST00000229239 TRBV12-3P01733 135 aa12.87□□□□□ -0.35
GAPDH-201ENST00000229239 PPBPP02775 128 aa12.87□□□□□ -0.35
GAPDH-201ENST00000229239 DEFB112Q30KQ8 113 aa12.87□□□□□ -0.35
GAPDH-201ENST00000229239 UNQ9165/PRO28630Q6UXU0 137 aa12.87□□□□□ -0.35
GAPDH-201ENST00000229239 TMEM191AQ9H0A3 160 aa12.87□□□□□ -0.35
GAPDH-201ENST00000229239 KLK15Q9H2R5 256 aa12.87□□□□□ -0.35
GAPDH-201ENST00000229239 AP5S1Q9NUS5 200 aa12.87□□□□□ -0.35
GAPDH-201ENST00000229239 PAM16Q9Y3D7 125 aa12.87□□□□□ -0.35
GAPDH-201ENST00000229239 ANK3Q12955 4377 aaKnown RBP12.86□□□□□ -0.35
GAPDH-201ENST00000229239 TRBV7-9A0A0J9YWB2 115 aa12.86□□□□□ -0.35
GAPDH-201ENST00000229239 TGFAP01135 160 aa12.86□□□□□ -0.35
GAPDH-201ENST00000229239 IL17RELQ6ZVW7 336 aa12.86□□□□□ -0.35
GAPDH-201ENST00000229239 LAMTOR2Q9Y2Q5 125 aa12.86□□□□□ -0.35
GAPDH-201ENST00000229239 INAFM1C9JVW0 142 aa12.85□□□□□ -0.35
GAPDH-201ENST00000229239 M0R143 59 aa12.85□□□□□ -0.35
GAPDH-201ENST00000229239 FSHBP01225 129 aa12.85□□□□□ -0.35
GAPDH-201ENST00000229239 FAM106AQ4KMX7 169 aa12.85□□□□□ -0.35
GAPDH-201ENST00000229239 EBLN2Q6P2I7 272 aa12.85□□□□□ -0.35
GAPDH-201ENST00000229239 FA2HQ7L5A8 372 aa12.85□□□□□ -0.35
GAPDH-201ENST00000229239 SONP18583 2426 aaKnown RBP12.85□□□□□ -0.35
GAPDH-201ENST00000229239 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.85□□□□□ -0.357e-10■■■□□ 19.2
GAPDH-201ENST00000229239 CD5LO43866 347 aa12.85□□□□□ -0.35
GAPDH-201ENST00000229239 TWIST1Q15672 202 aa12.85□□□□□ -0.35
GAPDH-201ENST00000229239 Q6ZS46 218 aa12.85□□□□□ -0.35
GAPDH-201ENST00000229239 PRSS3P2Q8NHM4 247 aa12.85□□□□□ -0.35
GAPDH-201ENST00000229239 DAZ1Q9NQZ3 744 aaKnown RBP12.85□□□□□ -0.35
GAPDH-201ENST00000229239 PEF1Q9UBV8 284 aaKnown RBP12.85□□□□□ -0.35
GAPDH-201ENST00000229239 JMJD1CQ15652 2540 aa12.84□□□□□ -0.35
GAPDH-201ENST00000229239 IGHV7-4-1A0A0J9YVY3 117 aa12.84□□□□□ -0.35
GAPDH-201ENST00000229239 SOCS3O14543 225 aa12.84□□□□□ -0.35
GAPDH-201ENST00000229239 IGHV3-11P01762 117 aa12.84□□□□□ -0.35
GAPDH-201ENST00000229239 IGHV4-59P01825 116 aa12.84□□□□□ -0.35
GAPDH-201ENST00000229239 TDRG1Q3Y452 100 aa12.84□□□□□ -0.35
GAPDH-201ENST00000229239 SPATA45Q537H7 98 aa12.84□□□□□ -0.35
GAPDH-201ENST00000229239 PET117Q6UWS5 81 aa12.84□□□□□ -0.35
GAPDH-201ENST00000229239 GPHB5Q86YW7 130 aa12.84□□□□□ -0.35
GAPDH-201ENST00000229239 OR10J6PQ8NGY7 276 aa12.84□□□□□ -0.35
GAPDH-201ENST00000229239 MAP1LC3CQ9BXW4 147 aa12.84□□□□□ -0.35
GAPDH-201ENST00000229239 TRAV9-2A0A087WT02 112 aa12.83□□□□□ -0.36
GAPDH-201ENST00000229239 TMEM213A2RRL7 107 aa12.83□□□□□ -0.36
GAPDH-201ENST00000229239 PSMB8P28062 276 aa12.83□□□□□ -0.36
GAPDH-201ENST00000229239 ZNF575Q86XF7 245 aa12.83□□□□□ -0.36
GAPDH-201ENST00000229239 ZNF738Q8NE65 137 aa12.83□□□□□ -0.36
GAPDH-201ENST00000229239 OR10AG1Q8NH19 301 aa12.83□□□□□ -0.36
GAPDH-201ENST00000229239 PRELID3AQ96N28 172 aa12.83□□□□□ -0.36
GAPDH-201ENST00000229239 YAE1D1Q9NRH1 226 aa12.83□□□□□ -0.36
GAPDH-201ENST00000229239 UQCR10Q9UDW1 63 aa12.83□□□□□ -0.36
GAPDH-201ENST00000229239 IGHV4-31P0DP07 118 aa12.82□□□□□ -0.36
GAPDH-201ENST00000229239 FOXE3Q13461 319 aa12.82□□□□□ -0.36
GAPDH-201ENST00000229239 PRR31Q5SQ13 230 aa12.82□□□□□ -0.36
GAPDH-201ENST00000229239 D6R8Y8 96 aa12.82□□□□□ -0.36
GAPDH-201ENST00000229239 SYS1-DBNDD2H3BUS1 97 aa12.82□□□□□ -0.36
GAPDH-201ENST00000229239 ZNF705AQ6ZN79 300 aaPredicted RBP12.82□□□□□ -0.36
GAPDH-201ENST00000229239 UFC1Q9Y3C8 167 aa12.82□□□□□ -0.36
GAPDH-201ENST00000229239 M0QZ24 198 aa12.81□□□□□ -0.36
GAPDH-201ENST00000229239 CKS2P33552 79 aa12.81□□□□□ -0.36
GAPDH-201ENST00000229239 CACNG7P62955 275 aa12.81□□□□□ -0.36
GAPDH-201ENST00000229239 MRPL51Q4U2R6 128 aaKnown RBP12.81□□□□□ -0.36
GAPDH-201ENST00000229239 SMIM15Q7Z3B0 74 aa12.81□□□□□ -0.36
GAPDH-201ENST00000229239 AMN1Q8IY45 258 aa12.81□□□□□ -0.36
GAPDH-201ENST00000229239 VPREB3Q9UKI3 123 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms