RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 PSMG4Q5JS54 123 aa10.87□□□□□ -0.67
NFKB1-201ENST00000226574 MEIG1Q5JSS6 88 aa10.87□□□□□ -0.67
NFKB1-201ENST00000226574 MTORP42345 2549 aa10.87□□□□□ -0.67
NFKB1-201ENST00000226574 H3BMG7 143 aa10.87□□□□□ -0.67
NFKB1-201ENST00000226574 LTAP01374 205 aa10.87□□□□□ -0.67
NFKB1-201ENST00000226574 C3orf36Q3SXR2 165 aa10.87□□□□□ -0.67
NFKB1-201ENST00000226574 CT83Q5H943 113 aa10.87□□□□□ -0.67
NFKB1-201ENST00000226574 BPESC1Q9GZL8 116 aa10.87□□□□□ -0.67
NFKB1-201ENST00000226574 TTC32Q5I0X7 151 aa10.87□□□□□ -0.67
NFKB1-201ENST00000226574 CSTL1Q9H114 145 aa10.87□□□□□ -0.67
NFKB1-201ENST00000226574 RNASE1P07998 156 aaKnown RBP10.86□□□□□ -0.67
NFKB1-201ENST00000226574 ESDP10768 282 aa10.86□□□□□ -0.67
NFKB1-201ENST00000226574 KLRB1Q12918 225 aa10.86□□□□□ -0.67
NFKB1-201ENST00000226574 LYPD1Q8N2G4 141 aa10.86□□□□□ -0.67
NFKB1-201ENST00000226574 VCX2Q9H322 139 aa10.86□□□□□ -0.67
NFKB1-201ENST00000226574 TRAV41A0A0B4J266 112 aa10.86□□□□□ -0.67
NFKB1-201ENST00000226574 IGLV2-8P01709 118 aa10.86□□□□□ -0.67
NFKB1-201ENST00000226574 THAP8Q8NA92 274 aa10.86□□□□□ -0.67
NFKB1-201ENST00000226574 ORMDL2Q53FV1 153 aa10.86□□□□□ -0.67
NFKB1-201ENST00000226574 RUSC1-AS1Q66K80 236 aa10.86□□□□□ -0.67
NFKB1-201ENST00000226574 SPRY4Q9C004 299 aa10.86□□□□□ -0.67
NFKB1-201ENST00000226574 NPFFR1Q9GZQ6 430 aa10.86□□□□□ -0.67
NFKB1-201ENST00000226574 LOXL1Q08397 574 aaPredicted RBP10.85□□□□□ -0.67
NFKB1-201ENST00000226574 ITLN2Q8WWU7 325 aaPredicted RBP10.85□□□□□ -0.67
NFKB1-201ENST00000226574 TNFRSF18Q9Y5U5 241 aa10.85□□□□□ -0.67
NFKB1-201ENST00000226574 H3BUX3 64 aa10.85□□□□□ -0.67
NFKB1-201ENST00000226574 DTX2Q86UW9 622 aa10.85□□□□□ -0.67
NFKB1-201ENST00000226574 GP9P14770 177 aa10.85□□□□□ -0.67
NFKB1-201ENST00000226574 TOMM7Q9P0U1 55 aa10.85□□□□□ -0.67
NFKB1-201ENST00000226574 F6UB75 175 aa10.84□□□□□ -0.67
NFKB1-201ENST00000226574 C9orf118A6NHY6 69 aa10.84□□□□□ -0.67
NFKB1-201ENST00000226574 OVOL3O00110 214 aa10.84□□□□□ -0.67
NFKB1-201ENST00000226574 DEFB1P60022 68 aa10.84□□□□□ -0.67
NFKB1-201ENST00000226574 PAX2Q02962 417 aa10.84□□□□□ -0.67
NFKB1-201ENST00000226574 NCKAP5O14513 1909 aa10.84□□□□□ -0.67
NFKB1-201ENST00000226574 DYNAPQ8N1N2 210 aa10.84□□□□□ -0.67
NFKB1-201ENST00000226574 DEFB125Q8N687 156 aa10.84□□□□□ -0.67
NFKB1-201ENST00000226574 PLA2G2CQ5R387 149 aa10.84□□□□□ -0.67
NFKB1-201ENST00000226574 LRRK2Q5S007 2527 aa10.83□□□□□ -0.68
NFKB1-201ENST00000226574 MUC22E2RYF6 1773 aaPredicted RBP10.83□□□□□ -0.68
NFKB1-201ENST00000226574 IGHV2-70DA0A0C4DH43 119 aa10.83□□□□□ -0.68
NFKB1-201ENST00000226574 C2orf70A6NJV1 201 aa10.83□□□□□ -0.68
NFKB1-201ENST00000226574 PRSS46E5RG02 174 aa10.83□□□□□ -0.68
NFKB1-201ENST00000226574 H3BRN7 92 aa10.83□□□□□ -0.68
NFKB1-201ENST00000226574 ZNF876PQ49A33 203 aa10.83□□□□□ -0.68
NFKB1-201ENST00000226574 DUX3Q96PT4 197 aa10.83□□□□□ -0.68
NFKB1-201ENST00000226574 PIMREGQ9BSJ6 248 aa10.83□□□□□ -0.68
NFKB1-201ENST00000226574 TSSC4Q9Y5U2 329 aaPredicted RBP10.83□□□□□ -0.68
NFKB1-201ENST00000226574 KNCNA6PVL3 124 aa10.83□□□□□ -0.68
NFKB1-201ENST00000226574 A0A1W2PRX2 142 aa10.82□□□□□ -0.68
NFKB1-201ENST00000226574 SLC25A16P16260 332 aa10.82□□□□□ -0.68
NFKB1-201ENST00000226574 FOXE3Q13461 319 aa10.82□□□□□ -0.68
NFKB1-201ENST00000226574 PDE6HQ13956 83 aa10.82□□□□□ -0.68
NFKB1-201ENST00000226574 MAPK1IP1LQ8NDC0 245 aa10.82□□□□□ -0.68
NFKB1-201ENST00000226574 KLF5Q13887 457 aaPredicted RBP10.82□□□□□ -0.68
NFKB1-201ENST00000226574 WIPF2Q8TF74 440 aaPredicted RBP10.82□□□□□ -0.68
NFKB1-201ENST00000226574 RNF5Q99942 180 aa10.82□□□□□ -0.68
NFKB1-201ENST00000226574 H3BRM9 83 aa10.82□□□□□ -0.68
NFKB1-201ENST00000226574 H7C1H1 209 aa10.82□□□□□ -0.68
NFKB1-201ENST00000226574 K7EIM0 57 aa10.82□□□□□ -0.68
NFKB1-201ENST00000226574 C2orf66Q6UXQ4 117 aa10.82□□□□□ -0.68
NFKB1-201ENST00000226574 SH2D6Q7Z4S9 175 aa10.82□□□□□ -0.68
NFKB1-201ENST00000226574 DSCAMO60469 2012 aa10.81□□□□□ -0.68
NFKB1-201ENST00000226574 LINC01549A6NIU2 74 aa10.81□□□□□ -0.68
NFKB1-201ENST00000226574 TAX1BP3O14907 124 aa10.81□□□□□ -0.68
NFKB1-201ENST00000226574 UCNP55089 124 aa10.81□□□□□ -0.68
NFKB1-201ENST00000226574 LINC00311Q8N616 119 aa10.81□□□□□ -0.68
NFKB1-201ENST00000226574 CCL19Q99731 98 aa10.81□□□□□ -0.68
NFKB1-201ENST00000226574 RHPN1-AS1Q9BWJ2 59 aa10.81□□□□□ -0.68
NFKB1-201ENST00000226574 NCOR1P1Q9H4R4 102 aa10.81□□□□□ -0.68
NFKB1-201ENST00000226574 IGKV1D-37A0A075B6S9 117 aa10.81□□□□□ -0.68
NFKB1-201ENST00000226574 SNCGO76070 127 aa10.81□□□□□ -0.68
NFKB1-201ENST00000226574 PPP1R17O96001 155 aa10.81□□□□□ -0.68
NFKB1-201ENST00000226574 C19orf54Q5BKX5 351 aa10.81□□□□□ -0.68
NFKB1-201ENST00000226574 LGALS9BQ3B8N2 356 aa10.8□□□□□ -0.68
NFKB1-201ENST00000226574 LGALS9CQ6DKI2 356 aa10.8□□□□□ -0.68
NFKB1-201ENST00000226574 ZNF625Q96I27 306 aaPredicted RBP10.8□□□□□ -0.68
NFKB1-201ENST00000226574 NBEAQ8NFP9 2946 aa10.8□□□□□ -0.68
NFKB1-201ENST00000226574 PRAC2D3DTV9 90 aa10.8□□□□□ -0.68
NFKB1-201ENST00000226574 LINC01587Q99440 93 aa10.8□□□□□ -0.68
NFKB1-201ENST00000226574 SPXQ9BT56 116 aa10.8□□□□□ -0.68
NFKB1-201ENST00000226574 AGPAT4-IT1Q9H0P7 198 aa10.8□□□□□ -0.68
NFKB1-201ENST00000226574 DPH3P1Q9H4G8 78 aa10.8□□□□□ -0.68
NFKB1-201ENST00000226574 SMPXQ9UHP9 88 aa10.8□□□□□ -0.68
NFKB1-201ENST00000226574 LINC00310P59036 64 aa10.8□□□□□ -0.68
NFKB1-201ENST00000226574 TMEM95Q3KNT9 176 aa10.8□□□□□ -0.68
NFKB1-201ENST00000226574 C8orf86Q6ZUL3 223 aa10.8□□□□□ -0.68
NFKB1-201ENST00000226574 MAP1AP78559 2803 aaPredicted RBP10.8□□□□□ -0.68
NFKB1-201ENST00000226574 TRAV12-2A0A075B6T6 113 aa10.79□□□□□ -0.68
NFKB1-201ENST00000226574 A0A1W2PPM0 123 aa10.79□□□□□ -0.68
NFKB1-201ENST00000226574 CGB3P0DN86 165 aa10.79□□□□□ -0.68
NFKB1-201ENST00000226574 CGB7P0DN87 165 aa10.79□□□□□ -0.68
NFKB1-201ENST00000226574 OR13C6PQ8NH95 151 aa10.79□□□□□ -0.68
NFKB1-201ENST00000226574 A8MWV9 139 aa10.79□□□□□ -0.68
NFKB1-201ENST00000226574 NPFFO15130 113 aa10.79□□□□□ -0.68
NFKB1-201ENST00000226574 EIF4EBP1Q13541 118 aaPredicted RBP10.79□□□□□ -0.68
NFKB1-201ENST00000226574 Q8N7P7 452 aa10.79□□□□□ -0.68
NFKB1-201ENST00000226574 CD28P10747 220 aa10.79□□□□□ -0.68
NFKB1-201ENST00000226574 CFHR4Q92496 578 aa10.79□□□□□ -0.68
NFKB1-201ENST00000226574 TMEM14CQ9P0S9 112 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms