RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 GPX1P07203 203 aa12.94□□□□□ -0.34
PFN1-201ENST00000225655 BCL2P10415 239 aa12.94□□□□□ -0.34
PFN1-201ENST00000225655 AKR1C3P42330 323 aa12.94□□□□□ -0.34
PFN1-201ENST00000225655 ATP5G3P48201 142 aa12.94□□□□□ -0.34
PFN1-201ENST00000225655 UBE2G1P62253 170 aa12.94□□□□□ -0.34
PFN1-201ENST00000225655 Q6ZTC4 211 aa12.94□□□□□ -0.34
PFN1-201ENST00000225655 TMEM256Q8N2U0 113 aa12.94□□□□□ -0.34
PFN1-201ENST00000225655 C20orf144Q9BQM9 153 aa12.94□□□□□ -0.34
PFN1-201ENST00000225655 VAX2Q9UIW0 290 aa12.94□□□□□ -0.34
PFN1-201ENST00000225655 TRAV10A0A0B4J240 114 aa12.93□□□□□ -0.34
PFN1-201ENST00000225655 PDE6DO43924 150 aa12.93□□□□□ -0.34
PFN1-201ENST00000225655 S100A9P06702 114 aaKnown RBP12.93□□□□□ -0.34
PFN1-201ENST00000225655 CRISP2P16562 243 aa12.93□□□□□ -0.34
PFN1-201ENST00000225655 FLI1Q01543 452 aaPredicted RBP12.93□□□□□ -0.34
PFN1-201ENST00000225655 MEF2BQ02080 365 aaPredicted RBP12.93□□□□□ -0.34
PFN1-201ENST00000225655 SAPCD1Q5SSQ6 148 aa12.93□□□□□ -0.34
PFN1-201ENST00000225655 CCDC28AQ8IWP9 274 aa12.93□□□□□ -0.34
PFN1-201ENST00000225655 Q8TAT8 98 aa12.93□□□□□ -0.34
PFN1-201ENST00000225655 FMC1Q96HJ9 113 aa12.93□□□□□ -0.34
PFN1-201ENST00000225655 NIPSNAP3BQ9BS92 247 aa12.93□□□□□ -0.34
PFN1-201ENST00000225655 TRAV12-2A0A075B6T6 113 aa12.92□□□□□ -0.34
PFN1-201ENST00000225655 IGHV3OR16-12A0A075B7B8 117 aa12.92□□□□□ -0.34
PFN1-201ENST00000225655 J3KRW8 73 aa12.92□□□□□ -0.34
PFN1-201ENST00000225655 ZNF767PQ75MW2 155 aa12.92□□□□□ -0.34
PFN1-201ENST00000225655 LYPD6BQ8NI32 183 aa12.92□□□□□ -0.34
PFN1-201ENST00000225655 PSG8Q9UQ74 426 aa12.92□□□□□ -0.34
PFN1-201ENST00000225655 C7orf71A4D174 169 aa12.91□□□□□ -0.34
PFN1-201ENST00000225655 SMIM9A6NGZ8 99 aa12.91□□□□□ -0.34
PFN1-201ENST00000225655 ZNF705AQ6ZN79 300 aaPredicted RBP12.91□□□□□ -0.34
PFN1-201ENST00000225655 PRNTQ86SH4 94 aa12.91□□□□□ -0.34
PFN1-201ENST00000225655 FAM19A4Q96LR4 140 aa12.91□□□□□ -0.34
PFN1-201ENST00000225655 NEU1Q99519 415 aa12.91□□□□□ -0.34
PFN1-201ENST00000225655 TREM1Q9NP99 234 aa12.91□□□□□ -0.34
PFN1-201ENST00000225655 CELA1Q9UNI1 258 aa12.91□□□□□ -0.34
PFN1-201ENST00000225655 KMT2AQ03164 3969 aa12.9□□□□□ -0.34
PFN1-201ENST00000225655 TRAV8-1A0A0A6YYK1 113 aa12.9□□□□□ -0.34
PFN1-201ENST00000225655 KLLNB2CW77 178 aa12.9□□□□□ -0.34
PFN1-201ENST00000225655 H7BYZ3 331 aa12.9□□□□□ -0.34
PFN1-201ENST00000225655 RNASE4P34096 147 aaKnown RBP12.9□□□□□ -0.34
PFN1-201ENST00000225655 C12orf74Q32Q52 190 aa12.9□□□□□ -0.34
PFN1-201ENST00000225655 GFI1BQ5VTD9 330 aa12.9□□□□□ -0.34
PFN1-201ENST00000225655 LINC01587Q99440 93 aa12.9□□□□□ -0.34
PFN1-201ENST00000225655 IGHV4-4A0A075B6R2 117 aa12.89□□□□□ -0.35
PFN1-201ENST00000225655 LOC102723971A0A1B0GUV8 181 aa12.89□□□□□ -0.35
PFN1-201ENST00000225655 RBFOX3A6NFN3 312 aa12.89□□□□□ -0.35
PFN1-201ENST00000225655 CRXO43186 299 aaPredicted RBP12.89□□□□□ -0.35
PFN1-201ENST00000225655 SGK494Q96LW2 274 aa12.89□□□□□ -0.35
PFN1-201ENST00000225655 EIF5A2Q9GZV4 153 aaKnown RBP12.89□□□□□ -0.35
PFN1-201ENST00000225655 ZFP30Q9Y2G7 519 aa12.89□□□□□ -0.35
PFN1-201ENST00000225655 TRAV12-3A0A0B4J271 114 aa12.88□□□□□ -0.35
PFN1-201ENST00000225655 SCO2A0A1W2PP80 73 aa12.88□□□□□ -0.35
PFN1-201ENST00000225655 TMEM183BQ1AE95 376 aa12.88□□□□□ -0.35
PFN1-201ENST00000225655 Q86TA4 180 aa12.88□□□□□ -0.35
PFN1-201ENST00000225655 ZFAND2AQ8N6M9 145 aa12.88□□□□□ -0.35
PFN1-201ENST00000225655 DEFB131BA0A096LNP1 70 aa12.87□□□□□ -0.35
PFN1-201ENST00000225655 TRAV34A0A0B4J273 112 aa12.87□□□□□ -0.35
PFN1-201ENST00000225655 TRBV6-1A0A0K0K1D8 114 aa12.87□□□□□ -0.35
PFN1-201ENST00000225655 TMEM189A5PLL7 270 aa12.87□□□□□ -0.35
PFN1-201ENST00000225655 TAS2R60P59551 318 aa12.87□□□□□ -0.35
PFN1-201ENST00000225655 RRN3P1Q2M238 152 aa12.87□□□□□ -0.35
PFN1-201ENST00000225655 SMUG1Q53HV7 270 aa12.87□□□□□ -0.35
PFN1-201ENST00000225655 C1orf158Q8N1D5 194 aa12.87□□□□□ -0.35
PFN1-201ENST00000225655 C11orf52Q96A22 123 aa12.87□□□□□ -0.35
PFN1-201ENST00000225655 LINC00479Q96M42 142 aa12.87□□□□□ -0.35
PFN1-201ENST00000225655 KLF12Q9Y4X4 402 aa12.87□□□□□ -0.35
PFN1-201ENST00000225655 FRAS1Q86XX4 4008 aa12.86□□□□□ -0.35
PFN1-201ENST00000225655 RGS13O14921 159 aa12.86□□□□□ -0.35
PFN1-201ENST00000225655 IGLV2-11P01706 119 aa12.86□□□□□ -0.35
PFN1-201ENST00000225655 BTN1A1Q13410 526 aa12.86□□□□□ -0.35
PFN1-201ENST00000225655 TOR2AQ5JU69 321 aa12.86□□□□□ -0.35
PFN1-201ENST00000225655 ZNF506Q5JVG8 444 aa12.86□□□□□ -0.35
PFN1-201ENST00000225655 FAM210AQ96ND0 272 aa12.86□□□□□ -0.35
PFN1-201ENST00000225655 PYGO2Q9BRQ0 406 aa12.86□□□□□ -0.35
PFN1-201ENST00000225655 MED9Q9NWA0 146 aa12.86□□□□□ -0.35
PFN1-201ENST00000225655 TRAV21A0A0B4J279 112 aa12.85□□□□□ -0.35
PFN1-201ENST00000225655 SPART-AS1P0CW21 52 aa12.85□□□□□ -0.35
PFN1-201ENST00000225655 HTN1P15515 57 aa12.85□□□□□ -0.35
PFN1-201ENST00000225655 PCNPQ8WW12 178 aaKnown RBP12.85□□□□□ -0.35
PFN1-201ENST00000225655 TMEM250H0YL14 139 aa12.84□□□□□ -0.35
PFN1-201ENST00000225655 LTAP01374 205 aa12.84□□□□□ -0.35
PFN1-201ENST00000225655 KIR3DS1Q14943 382 aa12.84□□□□□ -0.35
PFN1-201ENST00000225655 Q6AWC8 147 aa12.84□□□□□ -0.35
PFN1-201ENST00000225655 NDUFS6O75380 124 aaKnown RBP12.83□□□□□ -0.36
PFN1-201ENST00000225655 RPL35P42766 123 aaKnown RBP12.83□□□□□ -0.36
PFN1-201ENST00000225655 PEA15Q15121 130 aa12.83□□□□□ -0.36
PFN1-201ENST00000225655 ZNF493Q6ZR52 646 aa12.83□□□□□ -0.36
PFN1-201ENST00000225655 BAGE2Q86Y30 109 aa12.83□□□□□ -0.36
PFN1-201ENST00000225655 C16orf74Q96GX8 76 aa12.83□□□□□ -0.36
PFN1-201ENST00000225655 NDUFAF3Q9BU61 184 aa12.83□□□□□ -0.36
PFN1-201ENST00000225655 TEX48A0A1B0GUV7 120 aa12.82□□□□□ -0.36
PFN1-201ENST00000225655 CBY3A6NI87 242 aa12.82□□□□□ -0.36
PFN1-201ENST00000225655 GCGP01275 180 aa12.82□□□□□ -0.36
PFN1-201ENST00000225655 PFN1P07737 140 aaKnown RBP12.82□□□□□ -0.36
PFN1-201ENST00000225655 GNG4P50150 75 aa12.82□□□□□ -0.36
PFN1-201ENST00000225655 EMP1P54849 157 aa12.82□□□□□ -0.36
PFN1-201ENST00000225655 PRR9Q5T870 116 aa12.82□□□□□ -0.36
PFN1-201ENST00000225655 FAM159AQ6UWV7 190 aa12.82□□□□□ -0.36
PFN1-201ENST00000225655 TMEM183AQ8IXX5 376 aa12.82□□□□□ -0.36
PFN1-201ENST00000225655 TVP23CQ96ET8 276 aa12.82□□□□□ -0.36
PFN1-201ENST00000225655 C8orf49Q96NF6 230 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms