RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 RNASE4P34096 147 aaKnown RBP17.05■□□□□ 0.32
HOMER3-201ENST00000221222 C2CD4CQ8TF44 421 aa17.05■□□□□ 0.32
HOMER3-201ENST00000221222 FMC1Q96HJ9 113 aa17.05■□□□□ 0.32
HOMER3-201ENST00000221222 NIPSNAP3BQ9BS92 247 aa17.05■□□□□ 0.32
HOMER3-201ENST00000221222 NDFIP1Q9BT67 221 aa17.05■□□□□ 0.32
HOMER3-201ENST00000221222 C11orf68Q9H3H3 251 aaKnown RBP17.05■□□□□ 0.32
HOMER3-201ENST00000221222 TREM1Q9NP99 234 aa17.05■□□□□ 0.32
HOMER3-201ENST00000221222 IGHV4-28A0A0C4DH34 117 aa17.04■□□□□ 0.32
HOMER3-201ENST00000221222 TRBV6-1A0A0K0K1D8 114 aa17.04■□□□□ 0.32
HOMER3-201ENST00000221222 LOC102723971A0A1B0GUV8 181 aa17.04■□□□□ 0.32
HOMER3-201ENST00000221222 AKR1C3P42330 323 aa17.04■□□□□ 0.32
HOMER3-201ENST00000221222 PRNTQ86SH4 94 aa17.04■□□□□ 0.32
HOMER3-201ENST00000221222 C11orf52Q96A22 123 aa17.04■□□□□ 0.32
HOMER3-201ENST00000221222 LINC01587Q99440 93 aa17.04■□□□□ 0.32
HOMER3-201ENST00000221222 TAS2R60P59551 318 aa17.03■□□□□ 0.32
HOMER3-201ENST00000221222 TMEM183BQ1AE95 376 aa17.03■□□□□ 0.32
HOMER3-201ENST00000221222 SAPCD1Q5SSQ6 148 aa17.03■□□□□ 0.32
HOMER3-201ENST00000221222 Q86TA4 180 aa17.03■□□□□ 0.32
HOMER3-201ENST00000221222 A0A0J9YWU9 116 aa17.02■□□□□ 0.32
HOMER3-201ENST00000221222 PDE6DO43924 150 aa17.02■□□□□ 0.32
HOMER3-201ENST00000221222 S100A9P06702 114 aaKnown RBP17.02■□□□□ 0.32
HOMER3-201ENST00000221222 UBE2G1P62253 170 aa17.02■□□□□ 0.32
HOMER3-201ENST00000221222 Q6AWC8 147 aa17.02■□□□□ 0.32
HOMER3-201ENST00000221222 RRN3P1Q2M238 152 aa17.02■□□□□ 0.31
HOMER3-201ENST00000221222 ZFP30Q9Y2G7 519 aa17.02■□□□□ 0.31
HOMER3-201ENST00000221222 RBFOX3A6NFN3 312 aa17.01■□□□□ 0.31
HOMER3-201ENST00000221222 C3orf84H3BNL1 204 aa17.01■□□□□ 0.31
HOMER3-201ENST00000221222 PCNPQ8WW12 178 aaKnown RBP17.01■□□□□ 0.31
HOMER3-201ENST00000221222 C8orf49Q96NF6 230 aa17.01■□□□□ 0.31
HOMER3-201ENST00000221222 PYGO2Q9BRQ0 406 aa17.01■□□□□ 0.31
HOMER3-201ENST00000221222 LINC00467Q9BRT7 94 aa17.01■□□□□ 0.31
HOMER3-201ENST00000221222 ZNF705GA8MUZ8 300 aaPredicted RBP17■□□□□ 0.31
HOMER3-201ENST00000221222 ZNF506Q5JVG8 444 aa17■□□□□ 0.31
HOMER3-201ENST00000221222 TMEM189A5PLL7 270 aa16.99■□□□□ 0.31
HOMER3-201ENST00000221222 DEFB4AO15263 64 aa16.99■□□□□ 0.31
HOMER3-201ENST00000221222 LTAP01374 205 aa16.99■□□□□ 0.31
HOMER3-201ENST00000221222 SMUG1Q53HV7 270 aa16.99■□□□□ 0.31
HOMER3-201ENST00000221222 Q6ZQT7 251 aa16.99■□□□□ 0.31
HOMER3-201ENST00000221222 COX8CQ7Z4L0 72 aa16.99■□□□□ 0.31
HOMER3-201ENST00000221222 FAM210AQ96ND0 272 aa16.99■□□□□ 0.31
HOMER3-201ENST00000221222 DNAH7Q8WXX0 4024 aa16.99■□□□□ 0.31
HOMER3-201ENST00000221222 PRM2P04554 102 aa16.98■□□□□ 0.31
HOMER3-201ENST00000221222 IFITM2Q01629 132 aa16.98■□□□□ 0.31
HOMER3-201ENST00000221222 ZNF767PQ75MW2 155 aa16.98■□□□□ 0.31
HOMER3-201ENST00000221222 MUC7Q8TAX7 377 aa16.98■□□□□ 0.31
HOMER3-201ENST00000221222 AZU1P20160 251 aa16.97■□□□□ 0.31
HOMER3-201ENST00000221222 TRAV21A0A0B4J279 112 aa16.96■□□□□ 0.31
HOMER3-201ENST00000221222 NDUFS6O75380 124 aaKnown RBP16.96■□□□□ 0.31
HOMER3-201ENST00000221222 GCGP01275 180 aa16.96■□□□□ 0.31
HOMER3-201ENST00000221222 HTN1P15515 57 aa16.96■□□□□ 0.31
HOMER3-201ENST00000221222 RPL35P42766 123 aaKnown RBP16.96■□□□□ 0.31
HOMER3-201ENST00000221222 ZNF80P51504 273 aaPredicted RBP16.96■□□□□ 0.31
HOMER3-201ENST00000221222 TOR2AQ5JU69 321 aa16.96■□□□□ 0.31
HOMER3-201ENST00000221222 ZNF493Q6ZR52 646 aa16.96■□□□□ 0.31
HOMER3-201ENST00000221222 C16orf74Q96GX8 76 aa16.96■□□□□ 0.31
HOMER3-201ENST00000221222 DERL1Q9BUN8 251 aa16.96■□□□□ 0.31
HOMER3-201ENST00000221222 IGHV1OR15-1A0A075B7D0 117 aa16.95■□□□□ 0.3
HOMER3-201ENST00000221222 ANXA2RQ3ZCQ2 193 aa16.95■□□□□ 0.3
HOMER3-201ENST00000221222 TMEM183AQ8IXX5 376 aa16.95■□□□□ 0.3
HOMER3-201ENST00000221222 EIF4E3Q8N5X7 224 aaKnown RBP16.95■□□□□ 0.3
HOMER3-201ENST00000221222 RNASE8Q8TDE3 154 aaKnown RBP16.95■□□□□ 0.3
HOMER3-201ENST00000221222 TMEM263Q8WUH6 116 aaKnown RBP16.95■□□□□ 0.3
HOMER3-201ENST00000221222 MED9Q9NWA0 146 aa16.95■□□□□ 0.3
HOMER3-201ENST00000221222 TMEM250H0YL14 139 aa16.94■□□□□ 0.3
HOMER3-201ENST00000221222 RGS13O14921 159 aa16.94■□□□□ 0.3
HOMER3-201ENST00000221222 PFN1P07737 140 aaKnown RBP16.94■□□□□ 0.3
HOMER3-201ENST00000221222 CASC10Q5T4H9 136 aa16.94■□□□□ 0.3
HOMER3-201ENST00000221222 EIF5A2Q9GZV4 153 aaKnown RBP16.94■□□□□ 0.3
HOMER3-201ENST00000221222 PLAC8L1A1L4L8 177 aa16.93■□□□□ 0.3
HOMER3-201ENST00000221222 RAB14P61106 215 aa16.93■□□□□ 0.3
HOMER3-201ENST00000221222 ZC2HC1AQ96GY0 325 aa16.93■□□□□ 0.3
HOMER3-201ENST00000221222 MLST8Q9BVC4 326 aa16.93■□□□□ 0.3
HOMER3-201ENST00000221222 TDRG1Q3Y452 100 aa16.92■□□□□ 0.3
HOMER3-201ENST00000221222 BAGE2Q86Y30 109 aa16.92■□□□□ 0.3
HOMER3-201ENST00000221222 IL17DQ8TAD2 202 aa16.92■□□□□ 0.3
HOMER3-201ENST00000221222 DYNC2H1Q8NCM8 4307 aaKnown RBP16.92■□□□□ 0.3
HOMER3-201ENST00000221222 TENM2Q9NT68 2774 aa16.91■□□□□ 0.3
HOMER3-201ENST00000221222 CBY3A6NI87 242 aa16.91■□□□□ 0.3
HOMER3-201ENST00000221222 EMP1P54849 157 aa16.91■□□□□ 0.3
HOMER3-201ENST00000221222 MUC21Q5SSG8 566 aa16.91■□□□□ 0.3
HOMER3-201ENST00000221222 FAM159AQ6UWV7 190 aa16.91■□□□□ 0.3
HOMER3-201ENST00000221222 CLLU1Q5K131 121 aa16.9■□□□□ 0.3
HOMER3-201ENST00000221222 FABP5P3A8MUU1 101 aa16.89■□□□□ 0.3
HOMER3-201ENST00000221222 CRIP1P50238 77 aa16.89■□□□□ 0.3
HOMER3-201ENST00000221222 CENPWQ5EE01 88 aa16.89■□□□□ 0.3
HOMER3-201ENST00000221222 IBA57Q5T440 356 aaKnown RBP16.89■□□□□ 0.3
HOMER3-201ENST00000221222 ZFAND6Q6FIF0 208 aa16.89■□□□□ 0.3
HOMER3-201ENST00000221222 C11orf72Q8NBR9 251 aa16.89■□□□□ 0.3
HOMER3-201ENST00000221222 C11orf45Q8TAV5 145 aa16.89■□□□□ 0.3
HOMER3-201ENST00000221222 C11orf21Q9P2W6 132 aa16.89■□□□□ 0.3
HOMER3-201ENST00000221222 DKK2Q9UBU2 259 aa16.89■□□□□ 0.3
HOMER3-201ENST00000221222 CELA1Q9UNI1 258 aa16.89■□□□□ 0.3
HOMER3-201ENST00000221222 TRBV20OR9-2A0A075B6H5 130 aa16.89■□□□□ 0.29
HOMER3-201ENST00000221222 TEX48A0A1B0GUV7 120 aa16.89■□□□□ 0.29
HOMER3-201ENST00000221222 RAB19A4D1S5 217 aa16.89■□□□□ 0.29
HOMER3-201ENST00000221222 ZNF674Q2M3X9 581 aa16.89■□□□□ 0.29
HOMER3-201ENST00000221222 NHLRC2Q8NBF2 726 aa16.89■□□□□ 0.29
HOMER3-201ENST00000221222 SMIM12Q96EX1 92 aa16.89■□□□□ 0.29
HOMER3-201ENST00000221222 KCNS1Q96KK3 526 aa16.89■□□□□ 0.29
HOMER3-201ENST00000221222 NAGKQ9UJ70 344 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms