RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 CSTL1Q9H114 145 aa10.82□□□□□ -0.68
SIX4-201ENST00000216513 CSPG4Q6UVK1 2322 aa10.82□□□□□ -0.68
SIX4-201ENST00000216513 IGHV7-81A0A0B4J1V7 117 aa10.82□□□□□ -0.68
SIX4-201ENST00000216513 ADCYAP1P18509 176 aa10.82□□□□□ -0.68
SIX4-201ENST00000216513 GAGE6Q13070 117 aa10.82□□□□□ -0.68
SIX4-201ENST00000216513 Q8N7P7 452 aa10.82□□□□□ -0.68
SIX4-201ENST00000216513 C4orf3Q8WVX3 66 aa10.82□□□□□ -0.68
SIX4-201ENST00000216513 Q6ZS49 121 aa10.81□□□□□ -0.68
SIX4-201ENST00000216513 HIST1H2BLQ99880 126 aa10.81□□□□□ -0.68
SIX4-201ENST00000216513 LMO4P61968 165 aa10.81□□□□□ -0.68
SIX4-201ENST00000216513 CST9LQ9H4G1 147 aa10.81□□□□□ -0.68
SIX4-201ENST00000216513 HLA-DMBP28068 263 aa10.81□□□□□ -0.68
SIX4-201ENST00000216513 SIRPDQ9H106 197 aa10.81□□□□□ -0.68
SIX4-201ENST00000216513 CHD3Q12873 2000 aaKnown RBP10.81□□□□□ -0.68
SIX4-201ENST00000216513 IGKCP01834 107 aa10.8□□□□□ -0.68
SIX4-201ENST00000216513 ZNRF2Q8NHG8 242 aa10.8□□□□□ -0.68
SIX4-201ENST00000216513 RITA1Q96K30 269 aa10.8□□□□□ -0.68
SIX4-201ENST00000216513 LAMTOR2Q9Y2Q5 125 aa10.8□□□□□ -0.68
SIX4-201ENST00000216513 DOCK11Q5JSL3 2073 aa10.8□□□□□ -0.68
SIX4-201ENST00000216513 TRBV25-1A0A075B6N4 114 aa10.8□□□□□ -0.68
SIX4-201ENST00000216513 C22orf34Q6ZV56 151 aa10.8□□□□□ -0.68
SIX4-201ENST00000216513 CFHR4Q92496 578 aa10.8□□□□□ -0.68
SIX4-201ENST00000216513 SONP18583 2426 aaKnown RBP10.8□□□□□ -0.68
SIX4-201ENST00000216513 A0A087WWC5 75 aa10.8□□□□□ -0.68
SIX4-201ENST00000216513 PRB2P02812 416 aaPredicted RBP10.8□□□□□ -0.68
SIX4-201ENST00000216513 ARMS2P0C7Q2 107 aa10.8□□□□□ -0.68
SIX4-201ENST00000216513 LINC01551Q86U37 167 aa10.8□□□□□ -0.68
SIX4-201ENST00000216513 C1orf194Q5T5A4 169 aa10.79□□□□□ -0.68
SIX4-201ENST00000216513 IFI27L1Q96BM0 104 aa10.79□□□□□ -0.68
SIX4-201ENST00000216513 ANGP03950 147 aaKnown RBP10.79□□□□□ -0.68
SIX4-201ENST00000216513 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.79□□□□□ -0.68
SIX4-201ENST00000216513 SPXQ9BT56 116 aa10.79□□□□□ -0.68
SIX4-201ENST00000216513 ALPK3Q96L96 1907 aa10.79□□□□□ -0.68
SIX4-201ENST00000216513 BBC3Q96PG8 261 aaPredicted RBP10.79□□□□□ -0.68
SIX4-201ENST00000216513 TMEM14EPQ6UXP3 125 aa10.79□□□□□ -0.68
SIX4-201ENST00000216513 STPG4Q8N801 248 aa10.79□□□□□ -0.68
SIX4-201ENST00000216513 RNF138Q8WVD3 245 aa10.79□□□□□ -0.68
SIX4-201ENST00000216513 OSTCQ9NRP0 149 aa10.79□□□□□ -0.68
SIX4-201ENST00000216513 CRLF1O75462 422 aa10.79□□□□□ -0.68
SIX4-201ENST00000216513 STAG3L3P0CL85 134 aa10.79□□□□□ -0.68
SIX4-201ENST00000216513 MSMPQ1L6U9 139 aa10.79□□□□□ -0.68
SIX4-201ENST00000216513 FOXI2Q6ZQN5 318 aa10.79□□□□□ -0.68
SIX4-201ENST00000216513 TSKUQ8WUA8 353 aa10.79□□□□□ -0.68
SIX4-201ENST00000216513 DENND4AQ7Z401 1863 aa10.78□□□□□ -0.68
SIX4-201ENST00000216513 C17orf77Q96MU5 243 aa10.78□□□□□ -0.68
SIX4-201ENST00000216513 Q6YL49 198 aa10.78□□□□□ -0.68
SIX4-201ENST00000216513 ATP5L2Q7Z4Y8 100 aa10.78□□□□□ -0.68
SIX4-201ENST00000216513 A0A1B0GW64 132 aa10.78□□□□□ -0.68
SIX4-201ENST00000216513 COLCA2A8K830 154 aa10.78□□□□□ -0.68
SIX4-201ENST00000216513 LYPD1Q8N2G4 141 aa10.78□□□□□ -0.68
SIX4-201ENST00000216513 JPT2Q9H910 190 aa10.78□□□□□ -0.68
SIX4-201ENST00000216513 IGKV1-39P01597 117 aa10.78□□□□□ -0.68
SIX4-201ENST00000216513 IGKV1D-39P04432 117 aa10.78□□□□□ -0.68
SIX4-201ENST00000216513 Q8N9W7 124 aa10.78□□□□□ -0.68
SIX4-201ENST00000216513 TMEM75Q8N9X5 138 aa10.78□□□□□ -0.68
SIX4-201ENST00000216513 RNF183Q96D59 192 aa10.78□□□□□ -0.68
SIX4-201ENST00000216513 Q6ZQT7 251 aa10.78□□□□□ -0.68
SIX4-201ENST00000216513 CDSNQ15517 529 aa10.77□□□□□ -0.68
SIX4-201ENST00000216513 ORMDL2Q53FV1 153 aa10.77□□□□□ -0.68
SIX4-201ENST00000216513 TEX43Q6ZNM6 134 aa10.77□□□□□ -0.68
SIX4-201ENST00000216513 TNFRSF13BO14836 293 aaPredicted RBP10.77□□□□□ -0.69
SIX4-201ENST00000216513 MORN3Q6PF18 240 aaPredicted RBP10.77□□□□□ -0.69
SIX4-201ENST00000216513 DEFB125Q8N687 156 aa10.77□□□□□ -0.69
SIX4-201ENST00000216513 LAGE3Q14657 143 aa10.76□□□□□ -0.69
SIX4-201ENST00000216513 ATP6V0BQ99437 205 aa10.76□□□□□ -0.69
SIX4-201ENST00000216513 PLNP26678 52 aa10.76□□□□□ -0.69
SIX4-201ENST00000216513 C5orf30Q96GV9 206 aa10.76□□□□□ -0.69
SIX4-201ENST00000216513 RHODO00212 210 aa10.76□□□□□ -0.69
SIX4-201ENST00000216513 ANXA2RQ3ZCQ2 193 aa10.76□□□□□ -0.69
SIX4-201ENST00000216513 HIST3H2BBQ8N257 126 aa10.76□□□□□ -0.69
SIX4-201ENST00000216513 GUSBP1Q15486 140 aa10.76□□□□□ -0.69
SIX4-201ENST00000216513 INSL3P51460 131 aa10.75□□□□□ -0.69
SIX4-201ENST00000216513 TEX48A0A1B0GUV7 120 aa10.75□□□□□ -0.69
SIX4-201ENST00000216513 A6NDX4 124 aa10.75□□□□□ -0.69
SIX4-201ENST00000216513 C2orf70A6NJV1 201 aa10.75□□□□□ -0.69
SIX4-201ENST00000216513 C8orf31Q8N9H6 132 aa10.75□□□□□ -0.69
SIX4-201ENST00000216513 U3KQE9 123 aa10.75□□□□□ -0.69
SIX4-201ENST00000216513 WIPF3A6NGB9 483 aa10.75□□□□□ -0.69
SIX4-201ENST00000216513 VCYO14598 125 aa10.75□□□□□ -0.69
SIX4-201ENST00000216513 ATP5G1P05496 136 aa10.75□□□□□ -0.69
SIX4-201ENST00000216513 SLAQ13239 276 aa10.75□□□□□ -0.69
SIX4-201ENST00000216513 PDE6HQ13956 83 aa10.75□□□□□ -0.69
SIX4-201ENST00000216513 NPBQ8NG41 125 aa10.75□□□□□ -0.69
SIX4-201ENST00000216513 M0R2P5 195 aa10.75□□□□□ -0.69
SIX4-201ENST00000216513 NDUFS6O75380 124 aaKnown RBP10.75□□□□□ -0.69
SIX4-201ENST00000216513 FAM110AQ9BQ89 295 aa10.75□□□□□ -0.69
SIX4-201ENST00000216513 FGF23Q9GZV9 251 aaPredicted RBP10.75□□□□□ -0.69
SIX4-201ENST00000216513 SIGLEC8Q9NYZ4 499 aa10.75□□□□□ -0.69
SIX4-201ENST00000216513 INS-IGF2F8WCM5 200 aa10.74□□□□□ -0.69
SIX4-201ENST00000216513 IGHV3-30P01768 117 aa10.74□□□□□ -0.69
SIX4-201ENST00000216513 IGHV3-33P01772 117 aa10.74□□□□□ -0.69
SIX4-201ENST00000216513 IGHV3-30-3P0DP02 117 aa10.74□□□□□ -0.69
SIX4-201ENST00000216513 IGHV3-30-5P0DP03 117 aa10.74□□□□□ -0.69
SIX4-201ENST00000216513 GGTLC3B5MD39 225 aa10.74□□□□□ -0.69
SIX4-201ENST00000216513 OR2K2Q8NGT1 345 aa10.74□□□□□ -0.69
SIX4-201ENST00000216513 SLC25A2Q9BXI2 301 aa10.74□□□□□ -0.69
SIX4-201ENST00000216513 GNB1LQ9BYB4 327 aa10.74□□□□□ -0.69
SIX4-201ENST00000216513 OBSL1O75147 1896 aa10.74□□□□□ -0.69
SIX4-201ENST00000216513 HIVEP3Q5T1R4 2406 aa10.74□□□□□ -0.69
SIX4-201ENST00000216513 TRAV9-1A0A075B6T8 112 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms