RNA–Protein interactions for RNA: ENST00000175091.4

LAPTM4A-201, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4A, Length 1,765 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-201ENST00000175091 HOXA5P20719 270 aa11.73□□□□□ -0.53
LAPTM4A-201ENST00000175091 COA6Q5JTJ3 125 aaKnown RBP11.73□□□□□ -0.53
LAPTM4A-201ENST00000175091 RAX2Q96IS3 184 aa11.73□□□□□ -0.53
LAPTM4A-201ENST00000175091 LINC00477Q96M19 166 aa11.73□□□□□ -0.53
LAPTM4A-201ENST00000175091 TSSC4Q9Y5U2 329 aaPredicted RBP11.73□□□□□ -0.53
LAPTM4A-201ENST00000175091 FABP5P3A8MUU1 101 aa11.72□□□□□ -0.53
LAPTM4A-201ENST00000175091 F6UB75 175 aa11.72□□□□□ -0.53
LAPTM4A-201ENST00000175091 PROK1P58294 105 aa11.72□□□□□ -0.53
LAPTM4A-201ENST00000175091 HBBP68871 147 aa11.72□□□□□ -0.53
LAPTM4A-201ENST00000175091 FAM19A4Q96LR4 140 aa11.72□□□□□ -0.53
LAPTM4A-201ENST00000175091 RNF114Q9Y508 228 aa11.72□□□□□ -0.53
LAPTM4A-201ENST00000175091 XKRY2A2RUG3 117 aa11.72□□□□□ -0.53
LAPTM4A-201ENST00000175091 RAB4BP61018 213 aa11.72□□□□□ -0.53
LAPTM4A-201ENST00000175091 HIST1H1AQ02539 215 aaPredicted RBP11.72□□□□□ -0.53
LAPTM4A-201ENST00000175091 LINC01559Q495D7 138 aa11.72□□□□□ -0.53
LAPTM4A-201ENST00000175091 GDF5OSQ5U4N7 250 aa11.72□□□□□ -0.53
LAPTM4A-201ENST00000175091 WFDC3Q8IUB2 231 aa11.72□□□□□ -0.53
LAPTM4A-201ENST00000175091 TRBV7-9A0A0J9YWB2 115 aa11.71□□□□□ -0.54
LAPTM4A-201ENST00000175091 HAX1O00165 279 aa11.71□□□□□ -0.54
LAPTM4A-201ENST00000175091 TCF21O43680 179 aa11.71□□□□□ -0.54
LAPTM4A-201ENST00000175091 PRR9Q5T870 116 aa11.71□□□□□ -0.54
LAPTM4A-201ENST00000175091 TMSB15BA0A087X1C1 80 aa11.7□□□□□ -0.54
LAPTM4A-201ENST00000175091 A0A1W2PRX2 142 aa11.7□□□□□ -0.54
LAPTM4A-201ENST00000175091 CSN3P07498 182 aa11.7□□□□□ -0.54
LAPTM4A-201ENST00000175091 ZNF688P0C7X2 276 aa11.7□□□□□ -0.54
LAPTM4A-201ENST00000175091 TFPI2P48307 235 aa11.7□□□□□ -0.54
LAPTM4A-201ENST00000175091 CAMPP49913 170 aa11.7□□□□□ -0.54
LAPTM4A-201ENST00000175091 RPS20P60866 119 aaKnown RBP11.7□□□□□ -0.54
LAPTM4A-201ENST00000175091 SNRPD3P62318 126 aaKnown RBP11.7□□□□□ -0.54
LAPTM4A-201ENST00000175091 SLAQ13239 276 aa11.7□□□□□ -0.54
LAPTM4A-201ENST00000175091 ZNF575Q86XF7 245 aa11.7□□□□□ -0.54
LAPTM4A-201ENST00000175091 ZFAND2AQ8N6M9 145 aa11.7□□□□□ -0.54
LAPTM4A-201ENST00000175091 A0A1B0GUT8 65 aa11.69□□□□□ -0.54
LAPTM4A-201ENST00000175091 IFITM10A6NMD0 228 aa11.69□□□□□ -0.54
LAPTM4A-201ENST00000175091 CCL24O00175 119 aa11.69□□□□□ -0.54
LAPTM4A-201ENST00000175091 ARMS2P0C7Q2 107 aa11.69□□□□□ -0.54
LAPTM4A-201ENST00000175091 GFI1BQ5VTD9 330 aa11.69□□□□□ -0.54
LAPTM4A-201ENST00000175091 APRG1Q8IVJ8 170 aa11.69□□□□□ -0.54
LAPTM4A-201ENST00000175091 HIST3H2BBQ8N257 126 aa11.69□□□□□ -0.54
LAPTM4A-201ENST00000175091 IGLC6P0CF74 106 aa11.69□□□□□ -0.54
LAPTM4A-201ENST00000175091 CRISP2P16562 243 aa11.69□□□□□ -0.54
LAPTM4A-201ENST00000175091 CTRLP40313 264 aa11.69□□□□□ -0.54
LAPTM4A-201ENST00000175091 PSMG4Q5JS54 123 aa11.69□□□□□ -0.54
LAPTM4A-201ENST00000175091 C11orf21Q9P2W6 132 aa11.69□□□□□ -0.54
LAPTM4A-201ENST00000175091 TRAV2A0A0B4J234 112 aa11.68□□□□□ -0.54
LAPTM4A-201ENST00000175091 CRLF1O75462 422 aa11.68□□□□□ -0.54
LAPTM4A-201ENST00000175091 APCSP02743 223 aa11.68□□□□□ -0.54
LAPTM4A-201ENST00000175091 ORM1P02763 201 aa11.68□□□□□ -0.54
LAPTM4A-201ENST00000175091 AKR1D1P51857 326 aa11.68□□□□□ -0.54
LAPTM4A-201ENST00000175091 C2CD3Q4AC94 2353 aa11.67□□□□□ -0.54
LAPTM4A-201ENST00000175091 IGKV3D-20A0A0C4DH25 116 aa11.67□□□□□ -0.54
LAPTM4A-201ENST00000175091 PAFAH1B2P68402 229 aa11.67□□□□□ -0.54
LAPTM4A-201ENST00000175091 TMEM61Q8N0U2 210 aa11.67□□□□□ -0.54
LAPTM4A-201ENST00000175091 GATD1Q8NB37 220 aa11.67□□□□□ -0.54
LAPTM4A-201ENST00000175091 SSBP4Q9BWG4 385 aaPredicted RBP11.67□□□□□ -0.54
LAPTM4A-201ENST00000175091 A0A1B0GW15 77 aa11.67□□□□□ -0.54
LAPTM4A-201ENST00000175091 GRIFINA4D1Z8 144 aa11.67□□□□□ -0.54
LAPTM4A-201ENST00000175091 ADARB2-AS1A8MUL3 147 aa11.67□□□□□ -0.54
LAPTM4A-201ENST00000175091 LYZL1Q6UWQ5 148 aa11.67□□□□□ -0.54
LAPTM4A-201ENST00000175091 FER1L6-AS1Q8NA97 138 aa11.67□□□□□ -0.54
LAPTM4A-201ENST00000175091 DYNLRB2Q8TF09 96 aa11.67□□□□□ -0.54
LAPTM4A-201ENST00000175091 TPPP3Q9BW30 176 aa11.67□□□□□ -0.54
LAPTM4A-201ENST00000175091 A0A0J9YX75 114 aa11.66□□□□□ -0.54
LAPTM4A-201ENST00000175091 RIGQ13278 110 aa11.66□□□□□ -0.54
LAPTM4A-201ENST00000175091 KIAA1644Q3SXP7 199 aa11.66□□□□□ -0.54
LAPTM4A-201ENST00000175091 PDZD11Q5EBL8 140 aa11.66□□□□□ -0.54
LAPTM4A-201ENST00000175091 ODF3Q96PU9 254 aa11.66□□□□□ -0.54
LAPTM4A-201ENST00000175091 A0A1B0GUS0 222 aa11.65□□□□□ -0.54
LAPTM4A-201ENST00000175091 KLLNB2CW77 178 aa11.65□□□□□ -0.54
LAPTM4A-201ENST00000175091 SRIP30626 198 aa11.65□□□□□ -0.54
LAPTM4A-201ENST00000175091 DEFB114Q30KQ6 69 aa11.65□□□□□ -0.54
LAPTM4A-201ENST00000175091 Q6ZQT7 251 aa11.65□□□□□ -0.54
LAPTM4A-201ENST00000175091 BORCS7Q96B45 105 aa11.65□□□□□ -0.54
LAPTM4A-201ENST00000175091 CNFNQ9BYD5 112 aa11.65□□□□□ -0.54
LAPTM4A-201ENST00000175091 TP53TG3Q9ULZ0 132 aa11.65□□□□□ -0.54
LAPTM4A-201ENST00000175091 WNK1Q9H4A3 2382 aa11.65□□□□□ -0.54
LAPTM4A-201ENST00000175091 F8P00451 2351 aa11.65□□□□□ -0.55
LAPTM4A-201ENST00000175091 TRAV21A0A0B4J279 112 aa11.64□□□□□ -0.55
LAPTM4A-201ENST00000175091 S100A8P05109 93 aa11.64□□□□□ -0.55
LAPTM4A-201ENST00000175091 Q0VG73 95 aa11.64□□□□□ -0.55
LAPTM4A-201ENST00000175091 SIGLEC8Q9NYZ4 499 aa11.64□□□□□ -0.55
LAPTM4A-201ENST00000175091 J3KRW8 73 aa11.64□□□□□ -0.55
LAPTM4A-201ENST00000175091 GPX1P07203 203 aa11.64□□□□□ -0.55
LAPTM4A-201ENST00000175091 CD33P20138 364 aa11.64□□□□□ -0.55
LAPTM4A-201ENST00000175091 OR10J3Q5JRS4 329 aa11.64□□□□□ -0.55
LAPTM4A-201ENST00000175091 FOXI2Q6ZQN5 318 aa11.64□□□□□ -0.55
LAPTM4A-201ENST00000175091 LINC00310P59036 64 aa11.63□□□□□ -0.55
LAPTM4A-201ENST00000175091 KRTAP10-3P60369 221 aa11.63□□□□□ -0.55
LAPTM4A-201ENST00000175091 KIR3DS1Q14943 382 aa11.63□□□□□ -0.55
LAPTM4A-201ENST00000175091 CD300EQ496F6 205 aaPredicted RBP11.63□□□□□ -0.55
LAPTM4A-201ENST00000175091 EBLN2Q6P2I7 272 aa11.63□□□□□ -0.55
LAPTM4A-201ENST00000175091 ZNF493Q6ZR52 646 aa11.63□□□□□ -0.55
LAPTM4A-201ENST00000175091 S100A2P29034 98 aa11.62□□□□□ -0.55
LAPTM4A-201ENST00000175091 PRR31Q5SQ13 230 aa11.62□□□□□ -0.55
LAPTM4A-201ENST00000175091 HIST1H2BLQ99880 126 aa11.62□□□□□ -0.55
LAPTM4A-201ENST00000175091 SPAG8Q99932 426 aaPredicted RBP11.62□□□□□ -0.55
LAPTM4A-201ENST00000175091 BAHCC1Q9P281 2608 aa11.62□□□□□ -0.55
LAPTM4A-201ENST00000175091 AGRNO00468 2067 aa11.62□□□□□ -0.55
LAPTM4A-201ENST00000175091 F2Z2F3 143 aa11.62□□□□□ -0.55
LAPTM4A-201ENST00000175091 TMEM256Q8N2U0 113 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 126.2 ms