RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 OR4X2Q8NGF9 303 aa9.47□□□□□ -0.89
CHPF2-201ENST00000035307 C11orf52Q96A22 123 aa9.47□□□□□ -0.89
CHPF2-201ENST00000035307 IFI27L1Q96BM0 104 aa9.47□□□□□ -0.89
CHPF2-201ENST00000035307 ZNF503Q96F45 646 aa9.47□□□□□ -0.89
CHPF2-201ENST00000035307 FAM167A-AS1Q96KT0 104 aa9.47□□□□□ -0.89
CHPF2-201ENST00000035307 SCGB3A1Q96QR1 104 aa9.47□□□□□ -0.89
CHPF2-201ENST00000035307 TEX15Q9BXT5 2789 aa9.47□□□□□ -0.89
CHPF2-201ENST00000035307 TRAV12-3A0A0B4J271 114 aa9.47□□□□□ -0.89
CHPF2-201ENST00000035307 RAB9AP51151 201 aa9.47□□□□□ -0.89
CHPF2-201ENST00000035307 GTSCR1Q86UQ5 136 aa9.47□□□□□ -0.89
CHPF2-201ENST00000035307 MOB4Q9Y3A3 225 aa9.47□□□□□ -0.89
CHPF2-201ENST00000035307 YPEL3P61236 119 aaPredicted RBP9.47□□□□□ -0.89
CHPF2-201ENST00000035307 LINC00311Q8N616 119 aa9.47□□□□□ -0.89
CHPF2-201ENST00000035307 LY96Q9Y6Y9 160 aa9.47□□□□□ -0.89
CHPF2-201ENST00000035307 FNDC10F2Z333 226 aa9.46□□□□□ -0.89
CHPF2-201ENST00000035307 MGAM2Q2M2H8 2515 aa9.46□□□□□ -0.89
CHPF2-201ENST00000035307 H3BUT2 72 aa9.46□□□□□ -0.9
CHPF2-201ENST00000035307 HBDP02042 147 aa9.46□□□□□ -0.9
CHPF2-201ENST00000035307 NUTF2P61970 127 aaKnown RBP9.46□□□□□ -0.9
CHPF2-201ENST00000035307 SNRPD3P62318 126 aaKnown RBP9.46□□□□□ -0.9
CHPF2-201ENST00000035307 LBHQ53QV2 105 aaPredicted RBP9.46□□□□□ -0.9
CHPF2-201ENST00000035307 PRSS57Q6UWY2 283 aa9.46□□□□□ -0.9
CHPF2-201ENST00000035307 CBY1Q9Y3M2 126 aa9.46□□□□□ -0.9
CHPF2-201ENST00000035307 A0A087WWL8 130 aa9.45□□□□□ -0.9
CHPF2-201ENST00000035307 SYS1-DBNDD2H3BUS1 97 aa9.45□□□□□ -0.9
CHPF2-201ENST00000035307 HOXA3O43365 443 aaPredicted RBP9.45□□□□□ -0.9
CHPF2-201ENST00000035307 DEFB136Q30KP8 78 aa9.45□□□□□ -0.9
CHPF2-201ENST00000035307 ALKBH7Q9BT30 221 aaPredicted RBP9.45□□□□□ -0.9
CHPF2-201ENST00000035307 MINOS1Q5TGZ0 78 aa9.45□□□□□ -0.9
CHPF2-201ENST00000035307 MINOS1-NBL1R4GNA1 71 aa9.45□□□□□ -0.9
CHPF2-201ENST00000035307 A0A0G2JLM5 398 aa9.45□□□□□ -0.9
CHPF2-201ENST00000035307 K7EIM0 57 aa9.45□□□□□ -0.9
CHPF2-201ENST00000035307 NSUN5P1Q3KNT7 163 aa9.45□□□□□ -0.9
CHPF2-201ENST00000035307 C11orf71Q6IPW1 123 aa9.45□□□□□ -0.9
CHPF2-201ENST00000035307 NCOR1P1Q9H4R4 102 aa9.45□□□□□ -0.9
CHPF2-201ENST00000035307 IGLV2-23P01705 113 aa9.44□□□□□ -0.9
CHPF2-201ENST00000035307 NEGR1Q7Z3B1 354 aa9.44□□□□□ -0.9
CHPF2-201ENST00000035307 ATP5L2Q7Z4Y8 100 aa9.44□□□□□ -0.9
CHPF2-201ENST00000035307 PYGO2Q9BRQ0 406 aa9.44□□□□□ -0.9
CHPF2-201ENST00000035307 RHPN1-AS1Q9BWJ2 59 aa9.44□□□□□ -0.9
CHPF2-201ENST00000035307 MSRB1Q9NZV6 116 aa9.44□□□□□ -0.9
CHPF2-201ENST00000035307 OR11H12B2RN74 326 aa9.44□□□□□ -0.9
CHPF2-201ENST00000035307 APOMO95445 188 aa9.44□□□□□ -0.9
CHPF2-201ENST00000035307 GATA1P15976 413 aaPredicted RBP9.44□□□□□ -0.9
CHPF2-201ENST00000035307 DEFB113Q30KQ7 82 aa9.44□□□□□ -0.9
CHPF2-201ENST00000035307 OR11H1Q8NG94 326 aa9.44□□□□□ -0.9
CHPF2-201ENST00000035307 OR11H2Q8NH07 326 aa9.44□□□□□ -0.9
CHPF2-201ENST00000035307 SLC50A1Q9BRV3 221 aa9.44□□□□□ -0.9
CHPF2-201ENST00000035307 SYNJ2BPP57105 145 aa9.44□□□□□ -0.9
CHPF2-201ENST00000035307 Q6AWC8 147 aa9.44□□□□□ -0.9
CHPF2-201ENST00000035307 NHP2Q9NX24 153 aaKnown RBP9.44□□□□□ -0.9
CHPF2-201ENST00000035307 KIR2DL4Q99706 377 aa9.43□□□□□ -0.9
CHPF2-201ENST00000035307 TP73-AS1Q9UF72 201 aa9.43□□□□□ -0.9
CHPF2-201ENST00000035307 IGLL1P15814 213 aa9.43□□□□□ -0.9
CHPF2-201ENST00000035307 Q0VG73 95 aa9.43□□□□□ -0.9
CHPF2-201ENST00000035307 RNF5Q99942 180 aa9.43□□□□□ -0.9
CHPF2-201ENST00000035307 CELSR2Q9HCU4 2923 aa9.43□□□□□ -0.9
CHPF2-201ENST00000035307 UNC79Q9P2D8 2635 aa9.43□□□□□ -0.9
CHPF2-201ENST00000035307 A0A0U1RRA0 63 aa9.43□□□□□ -0.9
CHPF2-201ENST00000035307 SMIM27A0A1W2PRY6 76 aa9.43□□□□□ -0.9
CHPF2-201ENST00000035307 SLC25A16P16260 332 aa9.43□□□□□ -0.9
CHPF2-201ENST00000035307 RIPPLY3P57055 190 aa9.43□□□□□ -0.9
CHPF2-201ENST00000035307 EIF4EBP1Q13541 118 aaPredicted RBP9.43□□□□□ -0.9
CHPF2-201ENST00000035307 COL27A1Q8IZC6 1860 aaPredicted RBP9.43□□□□□ -0.9
CHPF2-201ENST00000035307 TRAV12-2A0A075B6T6 113 aa9.42□□□□□ -0.9
CHPF2-201ENST00000035307 CD300EQ496F6 205 aaPredicted RBP9.42□□□□□ -0.9
CHPF2-201ENST00000035307 LINC00322Q6ZN03 302 aaPredicted RBP9.42□□□□□ -0.9
CHPF2-201ENST00000035307 THAP8Q8NA92 274 aa9.42□□□□□ -0.9
CHPF2-201ENST00000035307 TMEM158Q8WZ71 300 aa9.42□□□□□ -0.9
CHPF2-201ENST00000035307 KNCNA6PVL3 124 aa9.42□□□□□ -0.9
CHPF2-201ENST00000035307 HERVK_113P61574 105 aa9.42□□□□□ -0.9
CHPF2-201ENST00000035307 PRR25Q96S07 402 aa9.42□□□□□ -0.9
CHPF2-201ENST00000035307 AVPP01185 164 aa9.42□□□□□ -0.9
CHPF2-201ENST00000035307 SMR3AQ99954 134 aa9.42□□□□□ -0.9
CHPF2-201ENST00000035307 IGKV1D-37A0A075B6S9 117 aa9.41□□□□□ -0.9
CHPF2-201ENST00000035307 IGHV1-24A0A0C4DH33 117 aa9.41□□□□□ -0.9
CHPF2-201ENST00000035307 PAX1P15863 534 aa9.41□□□□□ -0.9
CHPF2-201ENST00000035307 C10orf99Q6UWK7 81 aa9.41□□□□□ -0.9
CHPF2-201ENST00000035307 TET2Q6N021 2002 aaPredicted RBP9.41□□□□□ -0.9
CHPF2-201ENST00000035307 IGHV7-81A0A0B4J1V7 117 aa9.41□□□□□ -0.9
CHPF2-201ENST00000035307 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.41□□□□□ -0.9
CHPF2-201ENST00000035307 H3BRN7 92 aa9.41□□□□□ -0.9
CHPF2-201ENST00000035307 GP9P14770 177 aa9.41□□□□□ -0.9
CHPF2-201ENST00000035307 AMMECR1LQ6DCA0 310 aa9.41□□□□□ -0.9
CHPF2-201ENST00000035307 PRSS22Q9GZN4 317 aa9.41□□□□□ -0.9
CHPF2-201ENST00000035307 TEX22C9J3V5 150 aa9.41□□□□□ -0.9
CHPF2-201ENST00000035307 I3L2K1 104 aa9.41□□□□□ -0.9
CHPF2-201ENST00000035307 FABP2P12104 132 aa9.41□□□□□ -0.9
CHPF2-201ENST00000035307 PCP4P48539 62 aa9.41□□□□□ -0.9
CHPF2-201ENST00000035307 FOXE3Q13461 319 aa9.41□□□□□ -0.9
CHPF2-201ENST00000035307 TRAV21A0A0B4J279 112 aa9.4□□□□□ -0.9
CHPF2-201ENST00000035307 PRAC2D3DTV9 90 aa9.4□□□□□ -0.9
CHPF2-201ENST00000035307 OR11H6Q8NGC7 330 aa9.4□□□□□ -0.9
CHPF2-201ENST00000035307 SETXQ7Z333 2677 aaKnown RBP9.4□□□□□ -0.9
CHPF2-201ENST00000035307 NDUFS8O00217 210 aa9.4□□□□□ -0.9
CHPF2-201ENST00000035307 NPSP0C0P6 89 aa9.4□□□□□ -0.9
CHPF2-201ENST00000035307 EGR2P11161 476 aaPredicted RBP9.4□□□□□ -0.9
CHPF2-201ENST00000035307 C8orf86Q6ZUL3 223 aa9.4□□□□□ -0.9
CHPF2-201ENST00000035307 GTSF1Q8WW33 167 aa9.4□□□□□ -0.9
CHPF2-201ENST00000035307 NPYP01303 97 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms