RNA–Protein interactions for RNA: ENST00000013070.10

UBR7-201, Transcript of ubiquitin protein ligase E3 component n-recognin 7 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR7, Length 3,694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR7-201ENST00000013070 PDE6HQ13956 83 aa10.03□□□□□ -0.8
UBR7-201ENST00000013070 ARL6IP6Q8N6S5 226 aa10.03□□□□□ -0.8
UBR7-201ENST00000013070 MRPL35Q9NZE8 188 aaKnown RBP10.03□□□□□ -0.8
UBR7-201ENST00000013070 AGRNO00468 2067 aa10.03□□□□□ -0.8
UBR7-201ENST00000013070 PPBPP02775 128 aa10.03□□□□□ -0.8
UBR7-201ENST00000013070 MGPP08493 103 aa10.03□□□□□ -0.8
UBR7-201ENST00000013070 ZNF562Q6V9R5 426 aa10.03□□□□□ -0.8
UBR7-201ENST00000013070 VMO1Q7Z5L0 202 aa10.03□□□□□ -0.8
UBR7-201ENST00000013070 IGLV11-55A0A075B6I3 123 aa10.03□□□□□ -0.8
UBR7-201ENST00000013070 HOXB4P17483 251 aaPredicted RBP10.03□□□□□ -0.8
UBR7-201ENST00000013070 ZNF493Q6ZR52 646 aa10.03□□□□□ -0.8
UBR7-201ENST00000013070 GTSF1LQ9H1H1 148 aa10.03□□□□□ -0.8
UBR7-201ENST00000013070 MRPS12O15235 138 aaKnown RBP10.02□□□□□ -0.8
UBR7-201ENST00000013070 RPS20P60866 119 aaKnown RBP10.02□□□□□ -0.8
UBR7-201ENST00000013070 TMEM219Q86XT9 240 aa10.02□□□□□ -0.8
UBR7-201ENST00000013070 WFDC12Q8WWY7 111 aa10.02□□□□□ -0.8
UBR7-201ENST00000013070 CELSR1Q9NYQ6 3014 aa10.02□□□□□ -0.81
UBR7-201ENST00000013070 OVOL3O00110 214 aa10.02□□□□□ -0.81
UBR7-201ENST00000013070 SMAD5-AS1Q9Y6J3 95 aa10.02□□□□□ -0.81
UBR7-201ENST00000013070 DPM2O94777 84 aa10.01□□□□□ -0.81
UBR7-201ENST00000013070 PAX2Q02962 417 aa10.01□□□□□ -0.81
UBR7-201ENST00000013070 C16orf54Q6UWD8 224 aa10.01□□□□□ -0.81
UBR7-201ENST00000013070 C16orf92Q96LL3 132 aa10.01□□□□□ -0.81
UBR7-201ENST00000013070 ARL3P36405 182 aa10.01□□□□□ -0.81
UBR7-201ENST00000013070 SMAGPQ0VAQ4 97 aa10.01□□□□□ -0.81
UBR7-201ENST00000013070 TRBV25-1A0A075B6N4 114 aa10.01□□□□□ -0.81
UBR7-201ENST00000013070 TEX48A0A1B0GUV7 120 aa10.01□□□□□ -0.81
UBR7-201ENST00000013070 EMP1P54849 157 aa10.01□□□□□ -0.81
UBR7-201ENST00000013070 ADAMTSL5Q6ZMM2 481 aa10.01□□□□□ -0.81
UBR7-201ENST00000013070 NXT2Q9NPJ8 142 aaKnown RBP10□□□□□ -0.81
UBR7-201ENST00000013070 LINC01548A6NM66 108 aa10□□□□□ -0.81
UBR7-201ENST00000013070 F8W735 103 aaPredicted RBP10□□□□□ -0.81
UBR7-201ENST00000013070 ODF1Q14990 250 aa10□□□□□ -0.81
UBR7-201ENST00000013070 CCDC144NLQ6NUI1 221 aa10□□□□□ -0.81
UBR7-201ENST00000013070 RNF5Q99942 180 aa10□□□□□ -0.81
UBR7-201ENST00000013070 AGPAT4-IT1Q9H0P7 198 aa10□□□□□ -0.81
UBR7-201ENST00000013070 H3BMG7 143 aa10□□□□□ -0.81
UBR7-201ENST00000013070 LY6LH3BQJ8 138 aa10□□□□□ -0.81
UBR7-201ENST00000013070 ATP6V0E1O15342 81 aa10□□□□□ -0.81
UBR7-201ENST00000013070 UBTD1Q9HAC8 227 aa10□□□□□ -0.81
UBR7-201ENST00000013070 HIVEP3Q5T1R4 2406 aa9.99□□□□□ -0.81
UBR7-201ENST00000013070 ZNF502Q8TBZ5 544 aa9.99□□□□□ -0.81
UBR7-201ENST00000013070 RNF185Q96GF1 192 aa9.99□□□□□ -0.81
UBR7-201ENST00000013070 CYSLTR1Q9Y271 337 aa9.99□□□□□ -0.81
UBR7-201ENST00000013070 SCGB1D4Q6XE38 83 aa9.99□□□□□ -0.81
UBR7-201ENST00000013070 BSNQ9UPA5 3926 aa9.99□□□□□ -0.81
UBR7-201ENST00000013070 TGFAP01135 160 aa9.98□□□□□ -0.81
UBR7-201ENST00000013070 CDSNQ15517 529 aa9.98□□□□□ -0.81
UBR7-201ENST00000013070 NEGR1Q7Z3B1 354 aa9.98□□□□□ -0.81
UBR7-201ENST00000013070 SH2D6Q7Z4S9 175 aa9.98□□□□□ -0.81
UBR7-201ENST00000013070 IGHV7-81A0A0B4J1V7 117 aa9.98□□□□□ -0.81
UBR7-201ENST00000013070 SRD5A1P18405 259 aa9.98□□□□□ -0.81
UBR7-201ENST00000013070 PRTN3P24158 256 aa9.98□□□□□ -0.81
UBR7-201ENST00000013070 ETDBQ3ZM63 59 aa9.98□□□□□ -0.81
UBR7-201ENST00000013070 C11orf21Q9P2W6 132 aa9.98□□□□□ -0.81
UBR7-201ENST00000013070 IGKV3D-20A0A0C4DH25 116 aa9.98□□□□□ -0.81
UBR7-201ENST00000013070 IGHV3-11P01762 117 aa9.98□□□□□ -0.81
UBR7-201ENST00000013070 IGF1P05019 195 aa9.98□□□□□ -0.81
UBR7-201ENST00000013070 ZNF479Q96JC4 524 aa9.98□□□□□ -0.81
UBR7-201ENST00000013070 NPFFR1Q9GZQ6 430 aa9.98□□□□□ -0.81
UBR7-201ENST00000013070 USP9YO00507 2555 aaPredicted RBP9.98□□□□□ -0.81
UBR7-201ENST00000013070 TRBV6-1A0A0K0K1D8 114 aa9.97□□□□□ -0.81
UBR7-201ENST00000013070 IGLC6P0CF74 106 aa9.97□□□□□ -0.81
UBR7-201ENST00000013070 C14orf178Q8N769 122 aaPredicted RBP9.97□□□□□ -0.81
UBR7-201ENST00000013070 METTL26Q96S19 204 aa9.97□□□□□ -0.81
UBR7-201ENST00000013070 VKORC1Q9BQB6 163 aa9.97□□□□□ -0.81
UBR7-201ENST00000013070 C2CD3Q4AC94 2353 aa9.97□□□□□ -0.81
UBR7-201ENST00000013070 WFDC2Q14508 124 aa9.97□□□□□ -0.81
UBR7-201ENST00000013070 MAPKAPK5-AS1Q8N8E1 139 aa9.97□□□□□ -0.81
UBR7-201ENST00000013070 U3KQK5 164 aa9.97□□□□□ -0.81
UBR7-201ENST00000013070 LOC107984156A0A0G2JMH3 177 aa9.97□□□□□ -0.81
UBR7-201ENST00000013070 LAGE3Q14657 143 aa9.97□□□□□ -0.81
UBR7-201ENST00000013070 ARL17AQ8IVW1 177 aa9.97□□□□□ -0.81
UBR7-201ENST00000013070 TMEM238C9JI98 176 aa9.96□□□□□ -0.81
UBR7-201ENST00000013070 IGHG4P01861 327 aa9.96□□□□□ -0.81
UBR7-201ENST00000013070 ZFP36P26651 326 aaKnown RBP9.96□□□□□ -0.81
UBR7-201ENST00000013070 UFSP1Q6NVU6 142 aa9.96□□□□□ -0.81
UBR7-201ENST00000013070 TTC9CQ8N5M4 171 aa9.96□□□□□ -0.81
UBR7-201ENST00000013070 OR5A1Q8NGJ0 315 aa9.96□□□□□ -0.81
UBR7-201ENST00000013070 SCGB3A1Q96QR1 104 aa9.96□□□□□ -0.81
UBR7-201ENST00000013070 SRSF8Q9BRL6 282 aaKnown RBP9.96□□□□□ -0.81
UBR7-201ENST00000013070 CUBNO60494 3623 aa9.96□□□□□ -0.81
UBR7-201ENST00000013070 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.96□□□□□ -0.81
UBR7-201ENST00000013070 SRSF9Q13242 221 aaKnown RBP eCLIP9.96□□□□□ -0.81
UBR7-201ENST00000013070 OR11H12B2RN74 326 aa9.96□□□□□ -0.82
UBR7-201ENST00000013070 OR11H1Q8NG94 326 aa9.96□□□□□ -0.82
UBR7-201ENST00000013070 OR11H6Q8NGC7 330 aa9.96□□□□□ -0.82
UBR7-201ENST00000013070 OR11H2Q8NH07 326 aa9.96□□□□□ -0.82
UBR7-201ENST00000013070 F5H697 171 aa9.95□□□□□ -0.82
UBR7-201ENST00000013070 G3V4G9 280 aa9.95□□□□□ -0.82
UBR7-201ENST00000013070 BUB3O43684 328 aa9.95□□□□□ -0.82
UBR7-201ENST00000013070 NPBQ8NG41 125 aa9.95□□□□□ -0.82
UBR7-201ENST00000013070 HHLA3Q9XRX5 114 aa9.95□□□□□ -0.82
UBR7-201ENST00000013070 PHLDA3Q9Y5J5 127 aa9.95□□□□□ -0.82
UBR7-201ENST00000013070 CACNA1AO00555 2505 aa9.95□□□□□ -0.82
UBR7-201ENST00000013070 ATP5LO75964 103 aa9.95□□□□□ -0.82
UBR7-201ENST00000013070 LY6EQ16553 131 aa9.95□□□□□ -0.82
UBR7-201ENST00000013070 F6UB75 175 aa9.95□□□□□ -0.82
UBR7-201ENST00000013070 C8orf86Q6ZUL3 223 aa9.95□□□□□ -0.82
UBR7-201ENST00000013070 APOMO95445 188 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms