RNA–Protein interactions for RNA: ENST00000642072.1

LINC00339-212, long intergenic non-protein coding RNA 339, humanhuman

Gene LINC00339, Length 338 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-212ENST00000642072 SSSCA1O60232 199 aa5.76□□□□□ -1.49
LINC00339-212ENST00000642072 ZNF253O75346 499 aa5.76□□□□□ -1.49
LINC00339-212ENST00000642072 PTTG1O95997 202 aa5.76□□□□□ -1.49
LINC00339-212ENST00000642072 IGHV3-53P01767 116 aa5.76□□□□□ -1.49
LINC00339-212ENST00000642072 CRISP2P16562 243 aa5.76□□□□□ -1.49
LINC00339-212ENST00000642072 TNFSF8P32971 234 aa5.76□□□□□ -1.49
LINC00339-212ENST00000642072 S100A5P33763 92 aa5.76□□□□□ -1.49
LINC00339-212ENST00000642072 IFITM3Q01628 133 aa5.76□□□□□ -1.49
LINC00339-212ENST00000642072 ERCC8Q13216 396 aa5.76□□□□□ -1.49
LINC00339-212ENST00000642072 BTN1A1Q13410 526 aa5.76□□□□□ -1.49
LINC00339-212ENST00000642072 MRPL23Q16540 153 aaKnown RBP5.76□□□□□ -1.49
LINC00339-212ENST00000642072 IBA57Q5T440 356 aaKnown RBP5.76□□□□□ -1.49
LINC00339-212ENST00000642072 Q6ZQT7 251 aa5.76□□□□□ -1.49
LINC00339-212ENST00000642072 EIF4E3Q8N5X7 224 aaKnown RBP5.76□□□□□ -1.49
LINC00339-212ENST00000642072 C8orf49Q96NF6 230 aa5.76□□□□□ -1.49
LINC00339-212ENST00000642072 MGST2Q99735 147 aa5.76□□□□□ -1.49
LINC00339-212ENST00000642072 TP53TG3Q9ULZ0 132 aa5.76□□□□□ -1.49
LINC00339-212ENST00000642072 HHLA3Q9XRX5 114 aa5.76□□□□□ -1.49
LINC00339-212ENST00000642072 TRAV9-2A0A087WT02 112 aa5.75□□□□□ -1.49
LINC00339-212ENST00000642072 IGLV5-52A0A0A0MRZ9 124 aa5.75□□□□□ -1.49
LINC00339-212ENST00000642072 TRAV5A0A0B4J249 113 aa5.75□□□□□ -1.49
LINC00339-212ENST00000642072 FABP12A6NFH5 140 aa5.75□□□□□ -1.49
LINC00339-212ENST00000642072 K7EQD1 137 aa5.75□□□□□ -1.49
LINC00339-212ENST00000642072 GOSR2O14653 212 aa5.75□□□□□ -1.49
LINC00339-212ENST00000642072 COX7A2P2O60397 106 aa5.75□□□□□ -1.49
LINC00339-212ENST00000642072 PRAF2O60831 178 aa5.75□□□□□ -1.49
LINC00339-212ENST00000642072 TSC22D2O75157 780 aa5.75□□□□□ -1.49
LINC00339-212ENST00000642072 NDUFB4O95168 129 aa5.75□□□□□ -1.49
LINC00339-212ENST00000642072 OR4E1P0C645 316 aa5.75□□□□□ -1.49
LINC00339-212ENST00000642072 FAUP35544 74 aaKnown RBP5.75□□□□□ -1.49
LINC00339-212ENST00000642072 SLAQ13239 276 aa5.75□□□□□ -1.49
LINC00339-212ENST00000642072 GUK1Q16774 197 aa5.75□□□□□ -1.49
LINC00339-212ENST00000642072 PRR9Q5T870 116 aa5.75□□□□□ -1.49
LINC00339-212ENST00000642072 C10orf113Q5VZT2 155 aa5.75□□□□□ -1.49
LINC00339-212ENST00000642072 Q6ZSA8 131 aa5.75□□□□□ -1.49
LINC00339-212ENST00000642072 NEGR1Q7Z3B1 354 aa5.75□□□□□ -1.49
LINC00339-212ENST00000642072 ZFAND2AQ8N6M9 145 aa5.75□□□□□ -1.49
LINC00339-212ENST00000642072 OR10P1Q8NGE3 313 aa5.75□□□□□ -1.49
LINC00339-212ENST00000642072 NTN5Q8WTR8 489 aaPredicted RBP5.75□□□□□ -1.49
LINC00339-212ENST00000642072 MRPL53Q96EL3 112 aaKnown RBP5.75□□□□□ -1.49
LINC00339-212ENST00000642072 AGPAT4-IT1Q9H0P7 198 aa5.75□□□□□ -1.49
LINC00339-212ENST00000642072 MRPL16Q9NX20 251 aaKnown RBP5.75□□□□□ -1.49
LINC00339-212ENST00000642072 RCL1Q9Y2P8 373 aaKnown RBP5.75□□□□□ -1.49
LINC00339-212ENST00000642072 TRBV19A0A075B6N1 114 aa5.74□□□□□ -1.49
LINC00339-212ENST00000642072 C9orf170A2RU37 121 aa5.74□□□□□ -1.49
LINC00339-212ENST00000642072 MPDU1O75352 247 aa5.74□□□□□ -1.49
LINC00339-212ENST00000642072 C1QBP02746 253 aa5.74□□□□□ -1.49
LINC00339-212ENST00000642072 NMBP08949 121 aa5.74□□□□□ -1.49
LINC00339-212ENST00000642072 TAS2R30P59541 319 aa5.74□□□□□ -1.49
LINC00339-212ENST00000642072 DEFA1P59665 94 aa5.74□□□□□ -1.49
LINC00339-212ENST00000642072 DEFA3P59666 94 aa5.74□□□□□ -1.49
LINC00339-212ENST00000642072 UBE2MP61081 183 aaKnown RBP5.74□□□□□ -1.49
LINC00339-212ENST00000642072 IQCF2Q8IXL9 164 aa5.74□□□□□ -1.49
LINC00339-212ENST00000642072 TOMM5Q8N4H5 51 aa5.74□□□□□ -1.49
LINC00339-212ENST00000642072 DEDD2Q8WXF8 326 aa5.74□□□□□ -1.49
LINC00339-212ENST00000642072 GGACTQ9BVM4 153 aa5.74□□□□□ -1.49
LINC00339-212ENST00000642072 MRPL32Q9BYC8 188 aaKnown RBP5.74□□□□□ -1.49
LINC00339-212ENST00000642072 MGAT4CQ9UBM8 478 aa5.74□□□□□ -1.49
LINC00339-212ENST00000642072 V9GYH0 126 aa5.74□□□□□ -1.49
LINC00339-212ENST00000642072 C7orf66A4D0T2 115 aa5.73□□□□□ -1.49
LINC00339-212ENST00000642072 CRYGDP07320 174 aa5.73□□□□□ -1.49
LINC00339-212ENST00000642072 EVI2AP22794 236 aa5.73□□□□□ -1.49
LINC00339-212ENST00000642072 SRIP30626 198 aa5.73□□□□□ -1.49
LINC00339-212ENST00000642072 RNASE4P34096 147 aaKnown RBP5.73□□□□□ -1.49
LINC00339-212ENST00000642072 AP3S2P59780 193 aa5.73□□□□□ -1.49
LINC00339-212ENST00000642072 KRTAP10-4P60372 401 aaPredicted RBP5.73□□□□□ -1.49
LINC00339-212ENST00000642072 SPANXN2Q5MJ10 180 aa5.73□□□□□ -1.49
LINC00339-212ENST00000642072 C9orf47Q6ZRZ4 202 aa5.73□□□□□ -1.49
LINC00339-212ENST00000642072 Q8N814 137 aa5.73□□□□□ -1.49
LINC00339-212ENST00000642072 LINC00477Q96M19 166 aa5.73□□□□□ -1.49
LINC00339-212ENST00000642072 DNAJC4Q9NNZ3 241 aa5.73□□□□□ -1.49
LINC00339-212ENST00000642072 PKHD1L1Q86WI1 4243 aa5.72□□□□□ -1.49
LINC00339-212ENST00000642072 IGHV1OR15-1A0A075B7D0 117 aa5.72□□□□□ -1.49
LINC00339-212ENST00000642072 E5RGE8 158 aa5.72□□□□□ -1.49
LINC00339-212ENST00000642072 SFTA3P0C7M3 94 aa5.72□□□□□ -1.49
LINC00339-212ENST00000642072 CAMLGP49069 296 aa5.72□□□□□ -1.49
LINC00339-212ENST00000642072 ZNF415Q09FC8 603 aa5.72□□□□□ -1.49
LINC00339-212ENST00000642072 MIC13Q5XKP0 118 aa5.72□□□□□ -1.49
LINC00339-212ENST00000642072 C10orf126Q8N4M7 172 aa5.72□□□□□ -1.49
LINC00339-212ENST00000642072 OR10G4Q8NGN3 311 aa5.72□□□□□ -1.49
LINC00339-212ENST00000642072 RASL10AQ92737 203 aa5.72□□□□□ -1.49
LINC00339-212ENST00000642072 ZNF479Q96JC4 524 aa5.72□□□□□ -1.49
LINC00339-212ENST00000642072 TMEM14CQ9P0S9 112 aa5.72□□□□□ -1.49
LINC00339-212ENST00000642072 LRP2P98164 4655 aa5.72□□□□□ -1.49
LINC00339-212ENST00000642072 RGS13O14921 159 aa5.71□□□□□ -1.5
LINC00339-212ENST00000642072 MBPP02686 304 aaPredicted RBP5.71□□□□□ -1.5
LINC00339-212ENST00000642072 PLA2G1BP04054 148 aaKnown RBP5.71□□□□□ -1.5
LINC00339-212ENST00000642072 GPX1P07203 203 aa5.71□□□□□ -1.5
LINC00339-212ENST00000642072 GYPEP15421 78 aa5.71□□□□□ -1.5
LINC00339-212ENST00000642072 TIRAPP58753 221 aa5.71□□□□□ -1.5
LINC00339-212ENST00000642072 PDE6HQ13956 83 aa5.71□□□□□ -1.5
LINC00339-212ENST00000642072 WFDC2Q14508 124 aa5.71□□□□□ -1.5
LINC00339-212ENST00000642072 IAH1Q2TAA2 248 aaPredicted RBP5.71□□□□□ -1.5
LINC00339-212ENST00000642072 VWC2Q2TAL6 325 aa5.71□□□□□ -1.5
LINC00339-212ENST00000642072 PYDC2Q56P42 97 aa5.71□□□□□ -1.5
LINC00339-212ENST00000642072 LINC01556Q5JQF7 62 aa5.71□□□□□ -1.5
LINC00339-212ENST00000642072 SERTAD4-AS1Q5TG53 156 aa5.71□□□□□ -1.5
LINC00339-212ENST00000642072 NRARPQ7Z6K4 114 aa5.71□□□□□ -1.5
LINC00339-212ENST00000642072 LINC00528Q8N1L1 170 aa5.71□□□□□ -1.5
LINC00339-212ENST00000642072 EXOC3-AS1Q8N2X6 119 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms