RNA–Protein interactions for RNA: ENST00000641811.1

PHGDH-227, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,031 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-227ENST00000641811 PQLC2Q6ZP29 291 aa12.34□□□□□ -0.43
PHGDH-227ENST00000641811 C9orf47Q6ZRZ4 202 aa12.34□□□□□ -0.43
PHGDH-227ENST00000641811 LYPD1Q8N2G4 141 aa12.34□□□□□ -0.43
PHGDH-227ENST00000641811 RAB24Q969Q5 203 aa12.34□□□□□ -0.43
PHGDH-227ENST00000641811 FAM19A4Q96LR4 140 aa12.34□□□□□ -0.43
PHGDH-227ENST00000641811 NIPSNAP3BQ9BS92 247 aa12.34□□□□□ -0.43
PHGDH-227ENST00000641811 H7BYZ3 331 aa12.33□□□□□ -0.44
PHGDH-227ENST00000641811 ARL14EPLP0DKL9 152 aa12.33□□□□□ -0.44
PHGDH-227ENST00000641811 SERF2P84101 59 aa12.33□□□□□ -0.44
PHGDH-227ENST00000641811 OR11H4Q8NGC9 324 aa12.33□□□□□ -0.44
PHGDH-227ENST00000641811 HYLS1Q96M11 299 aa12.33□□□□□ -0.44
PHGDH-227ENST00000641811 ALMS1Q8TCU4 4167 aa12.33□□□□□ -0.44
PHGDH-227ENST00000641811 PGPA6NDG6 321 aa12.32□□□□□ -0.44
PHGDH-227ENST00000641811 CSN1S1P47710 185 aa12.32□□□□□ -0.44
PHGDH-227ENST00000641811 CD300CQ08708 224 aa12.32□□□□□ -0.44
PHGDH-227ENST00000641811 TMEM78Q5T7P6 136 aa12.32□□□□□ -0.44
PHGDH-227ENST00000641811 SSX7Q7RTT5 188 aa12.32□□□□□ -0.44
PHGDH-227ENST00000641811 Q8TAT8 98 aa12.32□□□□□ -0.44
PHGDH-227ENST00000641811 GNPNAT1Q96EK6 184 aaPredicted RBP12.32□□□□□ -0.44
PHGDH-227ENST00000641811 C20orf144Q9BQM9 153 aa12.32□□□□□ -0.44
PHGDH-227ENST00000641811 CYTL1Q9NRR1 136 aa12.32□□□□□ -0.44
PHGDH-227ENST00000641811 APLNQ9ULZ1 77 aa12.32□□□□□ -0.44
PHGDH-227ENST00000641811 TEX48A0A1B0GUV7 120 aa12.31□□□□□ -0.44
PHGDH-227ENST00000641811 MBP02144 154 aa12.31□□□□□ -0.44
PHGDH-227ENST00000641811 STAG3L2P0CL84 134 aa12.31□□□□□ -0.44
PHGDH-227ENST00000641811 STAG3L3P0CL85 134 aa12.31□□□□□ -0.44
PHGDH-227ENST00000641811 RNASE4P34096 147 aaKnown RBP12.31□□□□□ -0.44
PHGDH-227ENST00000641811 DAD1P61803 113 aa12.31□□□□□ -0.44
PHGDH-227ENST00000641811 BTN1A1Q13410 526 aa12.31□□□□□ -0.44
PHGDH-227ENST00000641811 OTORQ9NRC9 128 aa12.31□□□□□ -0.44
PHGDH-227ENST00000641811 ZNF492Q9P255 531 aa12.31□□□□□ -0.44
PHGDH-227ENST00000641811 RPH3ALQ9UNE2 315 aa12.31□□□□□ -0.44
PHGDH-227ENST00000641811 IGHV4-4A0A075B6R2 117 aa12.3□□□□□ -0.44
PHGDH-227ENST00000641811 C7orf71A4D174 169 aa12.3□□□□□ -0.44
PHGDH-227ENST00000641811 KLLNB2CW77 178 aa12.3□□□□□ -0.44
PHGDH-227ENST00000641811 DIRC3C9JPN6 131 aa12.3□□□□□ -0.44
PHGDH-227ENST00000641811 TAAR5O14804 337 aa12.3□□□□□ -0.44
PHGDH-227ENST00000641811 SLC25A5P05141 298 aaKnown RBP12.3□□□□□ -0.44
PHGDH-227ENST00000641811 HTN3P15516 51 aa12.3□□□□□ -0.44
PHGDH-227ENST00000641811 CRISP2P16562 243 aa12.3□□□□□ -0.44
PHGDH-227ENST00000641811 ZNF138P52744 262 aa12.3□□□□□ -0.44
PHGDH-227ENST00000641811 PRR9Q5T870 116 aa12.3□□□□□ -0.44
PHGDH-227ENST00000641811 Q6ZQT7 251 aa12.3□□□□□ -0.44
PHGDH-227ENST00000641811 ZFAND2AQ8N6M9 145 aa12.3□□□□□ -0.44
PHGDH-227ENST00000641811 C16orf74Q96GX8 76 aa12.3□□□□□ -0.44
PHGDH-227ENST00000641811 ACTR3CQ9C0K3 210 aaPredicted RBP12.3□□□□□ -0.44
PHGDH-227ENST00000641811 DNAH1Q9P2D7 4330 aa12.3□□□□□ -0.44
PHGDH-227ENST00000641811 LYRM9A8MSI8 78 aa12.29□□□□□ -0.44
PHGDH-227ENST00000641811 GPX1P07203 203 aa12.29□□□□□ -0.44
PHGDH-227ENST00000641811 DEFB130BP0DP73 79 aa12.29□□□□□ -0.44
PHGDH-227ENST00000641811 DEFB130AP0DP74 79 aa12.29□□□□□ -0.44
PHGDH-227ENST00000641811 GCHFRP30047 84 aa12.29□□□□□ -0.44
PHGDH-227ENST00000641811 ZNF726P1Q15940 193 aa12.29□□□□□ -0.44
PHGDH-227ENST00000641811 KCNRGQ8N5I3 272 aa12.29□□□□□ -0.44
PHGDH-227ENST00000641811 RNASE8Q8TDE3 154 aaKnown RBP12.29□□□□□ -0.44
PHGDH-227ENST00000641811 HYDINQ4G0P3 5121 aa12.29□□□□□ -0.44
PHGDH-227ENST00000641811 RBAKDNA6NC62 111 aa12.28□□□□□ -0.44
PHGDH-227ENST00000641811 ZNF324O75467 553 aaPredicted RBP12.28□□□□□ -0.44
PHGDH-227ENST00000641811 GNG5P63218 68 aa12.28□□□□□ -0.44
PHGDH-227ENST00000641811 ZNF493Q6ZR52 646 aa12.28□□□□□ -0.44
PHGDH-227ENST00000641811 CMTM2Q8TAZ6 248 aa12.28□□□□□ -0.44
PHGDH-227ENST00000641811 RXFP4Q8TDU9 374 aa12.28□□□□□ -0.44
PHGDH-227ENST00000641811 TMEM263Q8WUH6 116 aaKnown RBP12.28□□□□□ -0.44
PHGDH-227ENST00000641811 NOP10Q9NPE3 64 aaKnown RBP12.28□□□□□ -0.44
PHGDH-227ENST00000641811 TCTAP57738 103 aa12.27□□□□□ -0.45
PHGDH-227ENST00000641811 FAM74A1Q5RGS3 127 aa12.27□□□□□ -0.45
PHGDH-227ENST00000641811 GOLT1AQ6ZVE7 132 aa12.27□□□□□ -0.45
PHGDH-227ENST00000641811 CCDC28AQ8IWP9 274 aa12.27□□□□□ -0.45
PHGDH-227ENST00000641811 SUN5Q8TC36 379 aa12.27□□□□□ -0.45
PHGDH-227ENST00000641811 ARPC5LQ9BPX5 153 aa12.27□□□□□ -0.45
PHGDH-227ENST00000641811 TIMM8BQ9Y5J9 83 aaPredicted RBP12.27□□□□□ -0.45
PHGDH-227ENST00000641811 HMSDA8MTL9 139 aa12.26□□□□□ -0.45
PHGDH-227ENST00000641811 CXorf1O96002 111 aa12.26□□□□□ -0.45
PHGDH-227ENST00000641811 NMBP08949 121 aa12.26□□□□□ -0.45
PHGDH-227ENST00000641811 ZNF345Q14585 488 aa12.26□□□□□ -0.45
PHGDH-227ENST00000641811 LGALS9CQ6DKI2 356 aa12.26□□□□□ -0.45
PHGDH-227ENST00000641811 IQCF2Q8IXL9 164 aa12.26□□□□□ -0.45
PHGDH-227ENST00000641811 PYGO2Q9BRQ0 406 aa12.26□□□□□ -0.45
PHGDH-227ENST00000641811 AKR1C8PQ5T2L2 129 aa12.25□□□□□ -0.45
PHGDH-227ENST00000641811 Q6ZNX1 250 aa12.25□□□□□ -0.45
PHGDH-227ENST00000641811 ST6GAL2Q96JF0 529 aa12.25□□□□□ -0.45
PHGDH-227ENST00000641811 TMPRSS5Q9H3S3 457 aa12.25□□□□□ -0.45
PHGDH-227ENST00000641811 TRAV8-1A0A0A6YYK1 113 aa12.24□□□□□ -0.45
PHGDH-227ENST00000641811 CTXND1A0A1B0GTU2 59 aa12.24□□□□□ -0.45
PHGDH-227ENST00000641811 FGF8P55075 233 aaPredicted RBP12.24□□□□□ -0.45
PHGDH-227ENST00000641811 NDUFAF3Q9BU61 184 aa12.24□□□□□ -0.45
PHGDH-227ENST00000641811 TMEM167BQ9NRX6 74 aa12.24□□□□□ -0.45
PHGDH-227ENST00000641811 TP53TG3Q9ULZ0 132 aa12.24□□□□□ -0.45
PHGDH-227ENST00000641811 A0A0D9SG52 128 aa12.23□□□□□ -0.45
PHGDH-227ENST00000641811 TRBV7-9A0A0J9YWB2 115 aa12.23□□□□□ -0.45
PHGDH-227ENST00000641811 CBY3A6NI87 242 aa12.23□□□□□ -0.45
PHGDH-227ENST00000641811 GGTLC3B5MD39 225 aa12.23□□□□□ -0.45
PHGDH-227ENST00000641811 SUMO1P63165 101 aaKnown RBP12.23□□□□□ -0.45
PHGDH-227ENST00000641811 EIF4E3Q8N5X7 224 aaKnown RBP12.23□□□□□ -0.45
PHGDH-227ENST00000641811 SGK494Q96LW2 274 aa12.23□□□□□ -0.45
PHGDH-227ENST00000641811 LINC00467Q9BRT7 94 aa12.23□□□□□ -0.45
PHGDH-227ENST00000641811 GSN-AS1Q9NRJ2 163 aa12.23□□□□□ -0.45
PHGDH-227ENST00000641811 SNURFLB1AK76 121 aa12.22□□□□□ -0.45
PHGDH-227ENST00000641811 RGS13O14921 159 aa12.22□□□□□ -0.45
PHGDH-227ENST00000641811 BCL2L11O43521 198 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms