RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 PRR20AP86496 221 aa3.41□□□□□ -1.86
SCN3A-209ENST00000639244 EBI3Q14213 229 aa3.41□□□□□ -1.86
SCN3A-209ENST00000639244 POLQO75417 2590 aa3.41□□□□□ -1.86
SCN3A-209ENST00000639244 IGHV3-20A0A0C4DH32 117 aa3.41□□□□□ -1.86
SCN3A-209ENST00000639244 LAGE3Q14657 143 aa3.41□□□□□ -1.86
SCN3A-209ENST00000639244 IFI27L1Q96BM0 104 aa3.41□□□□□ -1.86
SCN3A-209ENST00000639244 GFI1Q99684 422 aa3.41□□□□□ -1.86
SCN3A-209ENST00000639244 LIME1Q9H400 295 aa3.41□□□□□ -1.86
SCN3A-209ENST00000639244 RFPL3SP0C7P2 107 aa3.41□□□□□ -1.86
SCN3A-209ENST00000639244 PLA2G12AQ9BZM1 189 aa3.41□□□□□ -1.86
SCN3A-209ENST00000639244 ZNF355PQ9NSJ1 428 aa3.41□□□□□ -1.86
SCN3A-209ENST00000639244 K7EMT4 169 aa3.41□□□□□ -1.86
SCN3A-209ENST00000639244 C11orf45Q8TAV5 145 aa3.41□□□□□ -1.86
SCN3A-209ENST00000639244 TMEM158Q8WZ71 300 aa3.41□□□□□ -1.86
SCN3A-209ENST00000639244 C2CD4DB7Z1M9 353 aa3.41□□□□□ -1.86
SCN3A-209ENST00000639244 TMEM256-PLSCR3K7ERE1 68 aa3.41□□□□□ -1.86
SCN3A-209ENST00000639244 TMEM52BQ4KMG9 183 aa3.41□□□□□ -1.86
SCN3A-209ENST00000639244 S100A7L2Q5SY68 101 aa3.41□□□□□ -1.86
SCN3A-209ENST00000639244 Q6P435 159 aa3.41□□□□□ -1.86
SCN3A-209ENST00000639244 LINC00596Q86U02 117 aa3.41□□□□□ -1.86
SCN3A-209ENST00000639244 ESM1Q9NQ30 184 aa3.41□□□□□ -1.86
SCN3A-209ENST00000639244 GNB1P62873 340 aa3.41□□□□□ -1.86
SCN3A-209ENST00000639244 CFHR3Q02985 330 aa3.41□□□□□ -1.86
SCN3A-209ENST00000639244 ZNF295-AS1Q8N0V1 137 aa3.41□□□□□ -1.86
SCN3A-209ENST00000639244 NHSQ6T4R5 1651 aa3.41□□□□□ -1.86
SCN3A-209ENST00000639244 COL2A1P02458 1487 aaPredicted RBP3.41□□□□□ -1.86
SCN3A-209ENST00000639244 DNAL4O96015 105 aa3.41□□□□□ -1.86
SCN3A-209ENST00000639244 PCSK4Q6UW60 755 aa3.41□□□□□ -1.86
SCN3A-209ENST00000639244 IGFL2Q6UWQ7 119 aa3.41□□□□□ -1.86
SCN3A-209ENST00000639244 Q8N1Y9 231 aa3.41□□□□□ -1.86
SCN3A-209ENST00000639244 DEFB127Q9H1M4 99 aa3.41□□□□□ -1.86
SCN3A-209ENST00000639244 PLA2G2EQ9NZK7 142 aa3.41□□□□□ -1.86
SCN3A-209ENST00000639244 TRAV8-3A0A0A6YYJ7 113 aa3.4□□□□□ -1.86
SCN3A-209ENST00000639244 TEX49A0A1B0GTD5 131 aa3.4□□□□□ -1.86
SCN3A-209ENST00000639244 PPYP01298 95 aa3.4□□□□□ -1.86
SCN3A-209ENST00000639244 ZNF726P1Q15940 193 aa3.4□□□□□ -1.86
SCN3A-209ENST00000639244 POM121L12Q8N7R1 296 aa3.4□□□□□ -1.86
SCN3A-209ENST00000639244 PRR26Q8N8Z3 221 aa3.4□□□□□ -1.86
SCN3A-209ENST00000639244 NEXN-AS1Q8NBZ9 246 aa3.4□□□□□ -1.86
SCN3A-209ENST00000639244 TRGV9Q99603 122 aa3.4□□□□□ -1.86
SCN3A-209ENST00000639244 SLC25A22Q9H936 323 aa3.4□□□□□ -1.86
SCN3A-209ENST00000639244 CCL24O00175 119 aa3.4□□□□□ -1.86
SCN3A-209ENST00000639244 ERCC8Q13216 396 aa3.4□□□□□ -1.86
SCN3A-209ENST00000639244 CLEC19AQ6UXS0 136 aa3.4□□□□□ -1.86
SCN3A-209ENST00000639244 SFTPA2Q8IWL1 248 aa3.4□□□□□ -1.86
SCN3A-209ENST00000639244 SRSF12Q8WXF0 261 aaKnown RBP3.4□□□□□ -1.86
SCN3A-209ENST00000639244 LINC01619G3V211 115 aa3.4□□□□□ -1.86
SCN3A-209ENST00000639244 MRPS12O15235 138 aaKnown RBP3.4□□□□□ -1.86
SCN3A-209ENST00000639244 OSTCQ9NRP0 149 aa3.4□□□□□ -1.86
SCN3A-209ENST00000639244 PRSS3P2Q8NHM4 247 aa3.4□□□□□ -1.87
SCN3A-209ENST00000639244 IGHV3-15A0A0B4J1V0 119 aa3.4□□□□□ -1.87
SCN3A-209ENST00000639244 C17orf51A8MQB3 221 aa3.4□□□□□ -1.87
SCN3A-209ENST00000639244 RNASE2P10153 161 aaKnown RBP3.4□□□□□ -1.87
SCN3A-209ENST00000639244 CACNG7P62955 275 aa3.4□□□□□ -1.87
SCN3A-209ENST00000639244 DEFB103AP81534 67 aa3.4□□□□□ -1.87
SCN3A-209ENST00000639244 C2orf82Q6UX34 121 aa3.4□□□□□ -1.87
SCN3A-209ENST00000639244 TAS2R4Q9NYW5 299 aa3.4□□□□□ -1.87
SCN3A-209ENST00000639244 TRBV25-1A0A075B6N4 114 aa3.4□□□□□ -1.87
SCN3A-209ENST00000639244 INS-IGF2F8WCM5 200 aa3.4□□□□□ -1.87
SCN3A-209ENST00000639244 SPRY3O43610 288 aa3.4□□□□□ -1.87
SCN3A-209ENST00000639244 SPINK4O60575 86 aa3.4□□□□□ -1.87
SCN3A-209ENST00000639244 APOHP02749 345 aaPredicted RBP3.4□□□□□ -1.87
SCN3A-209ENST00000639244 CCL1P22362 96 aa3.4□□□□□ -1.87
SCN3A-209ENST00000639244 COX8CQ7Z4L0 72 aa3.4□□□□□ -1.87
SCN3A-209ENST00000639244 MARCH3Q86UD3 253 aa3.4□□□□□ -1.87
SCN3A-209ENST00000639244 TRAV41A0A0B4J266 112 aa3.4□□□□□ -1.87
SCN3A-209ENST00000639244 RBMY1BA6NDE4 496 aaKnown RBP3.4□□□□□ -1.87
SCN3A-209ENST00000639244 RBMY1EA6NEQ0 496 aaKnown RBP3.4□□□□□ -1.87
SCN3A-209ENST00000639244 RBMY1DP0C7P1 496 aaKnown RBP3.4□□□□□ -1.87
SCN3A-209ENST00000639244 RBMY1A1P0DJD3 496 aaKnown RBP3.4□□□□□ -1.87
SCN3A-209ENST00000639244 RBMY1CP0DJD4 496 aa3.4□□□□□ -1.87
SCN3A-209ENST00000639244 CKS2P33552 79 aa3.4□□□□□ -1.87
SCN3A-209ENST00000639244 RBMY1FQ15415 496 aaKnown RBP3.4□□□□□ -1.87
SCN3A-209ENST00000639244 GUSBP11Q6P575 273 aa3.4□□□□□ -1.87
SCN3A-209ENST00000639244 MDP1Q86V88 176 aa3.4□□□□□ -1.87
SCN3A-209ENST00000639244 THSD7BQ9C0I4 1608 aa3.4□□□□□ -1.87
SCN3A-209ENST00000639244 C20orf204Q6ZNR8 217 aa3.39□□□□□ -1.87
SCN3A-209ENST00000639244 ODF3Q96PU9 254 aa3.39□□□□□ -1.87
SCN3A-209ENST00000639244 TRBV27A0A0K0K1C4 114 aa3.39□□□□□ -1.87
SCN3A-209ENST00000639244 PHLDA1Q8WV24 401 aaPredicted RBP3.39□□□□□ -1.87
SCN3A-209ENST00000639244 NABP2Q9BQ15 211 aa3.39□□□□□ -1.87
SCN3A-209ENST00000639244 WI2-2373I1.2A0A1W2PRP0 233 aa3.39□□□□□ -1.87
SCN3A-209ENST00000639244 DSCR4P56555 118 aaPredicted RBP3.39□□□□□ -1.87
SCN3A-209ENST00000639244 EDDM3BP56851 147 aa3.39□□□□□ -1.87
SCN3A-209ENST00000639244 UBE2D3P61077 147 aa3.39□□□□□ -1.87
SCN3A-209ENST00000639244 UBE2D2P62837 147 aa3.39□□□□□ -1.87
SCN3A-209ENST00000639244 SUPT4H1P63272 117 aaKnown RBP3.39□□□□□ -1.87
SCN3A-209ENST00000639244 TMEM30BQ3MIR4 351 aa3.39□□□□□ -1.87
SCN3A-209ENST00000639244 ZC2HC1BQ5TFG8 222 aa3.39□□□□□ -1.87
SCN3A-209ENST00000639244 MORN4Q8NDC4 146 aa3.39□□□□□ -1.87
SCN3A-209ENST00000639244 UBALD1Q8TB05 177 aa3.39□□□□□ -1.87
SCN3A-209ENST00000639244 CALYQ9NYX4 217 aa3.39□□□□□ -1.87
SCN3A-209ENST00000639244 GPR179Q6PRD1 2367 aa3.39□□□□□ -1.87
SCN3A-209ENST00000639244 TTC28Q96AY4 2481 aa3.39□□□□□ -1.87
SCN3A-209ENST00000639244 J3QRE1 110 aa3.39□□□□□ -1.87
SCN3A-209ENST00000639244 EPPINO95925 133 aa3.39□□□□□ -1.87
SCN3A-209ENST00000639244 LYZL4Q96KX0 146 aa3.39□□□□□ -1.87
SCN3A-209ENST00000639244 C4orf45Q96LM5 186 aa3.39□□□□□ -1.87
SCN3A-209ENST00000639244 LTBP2Q14767 1821 aa3.39□□□□□ -1.87
SCN3A-209ENST00000639244 TNRC6CQ9HCJ0 1690 aaKnown RBP3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms