RNA–Protein interactions for RNA: ENST00000639145.1

SCARB2-215, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 4,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-215ENST00000639145 ARMS2P0C7Q2 107 aa10.78□□□□□ -0.68
SCARB2-215ENST00000639145 LYPD6Q86Y78 171 aa10.78□□□□□ -0.68
SCARB2-215ENST00000639145 CYSLTR1Q9Y271 337 aa10.78□□□□□ -0.68
SCARB2-215ENST00000639145 RNASE1P07998 156 aaKnown RBP10.77□□□□□ -0.68
SCARB2-215ENST00000639145 C14orf144Q96I85 54 aa10.77□□□□□ -0.68
SCARB2-215ENST00000639145 TRAV12-2A0A075B6T6 113 aa10.77□□□□□ -0.69
SCARB2-215ENST00000639145 IGHV7-81A0A0B4J1V7 117 aa10.77□□□□□ -0.69
SCARB2-215ENST00000639145 KLK9Q9UKQ9 250 aa10.77□□□□□ -0.69
SCARB2-215ENST00000639145 TRBV19A0A075B6N1 114 aa10.76□□□□□ -0.69
SCARB2-215ENST00000639145 TMEM238LA0A1B0GVL6 79 aa10.76□□□□□ -0.69
SCARB2-215ENST00000639145 A6NJY4 79 aa10.76□□□□□ -0.69
SCARB2-215ENST00000639145 LINC00614P0C842 121 aa10.76□□□□□ -0.69
SCARB2-215ENST00000639145 RPL36AP83881 106 aaKnown RBP10.76□□□□□ -0.69
SCARB2-215ENST00000639145 CFHR3Q02985 330 aa10.76□□□□□ -0.69
SCARB2-215ENST00000639145 GUSBP1Q15486 140 aa10.76□□□□□ -0.69
SCARB2-215ENST00000639145 Q86TA4 180 aa10.76□□□□□ -0.69
SCARB2-215ENST00000639145 RPL36ALQ969Q0 106 aaKnown RBP10.76□□□□□ -0.69
SCARB2-215ENST00000639145 PRADC1Q9BSG0 188 aa10.76□□□□□ -0.69
SCARB2-215ENST00000639145 D6R8Y8 96 aa10.76□□□□□ -0.69
SCARB2-215ENST00000639145 Q8N7P7 452 aa10.76□□□□□ -0.69
SCARB2-215ENST00000639145 NXT2Q9NPJ8 142 aaKnown RBP10.76□□□□□ -0.69
SCARB2-215ENST00000639145 UQCR10Q9UDW1 63 aa10.76□□□□□ -0.69
SCARB2-215ENST00000639145 SRSF1Q07955 248 aaKnown RBP eCLIP10.76□□□□□ -0.69
SCARB2-215ENST00000639145 UBE2DNLQ8IWF7 75 aa10.76□□□□□ -0.69
SCARB2-215ENST00000639145 C8orf31Q8N9H6 132 aa10.76□□□□□ -0.69
SCARB2-215ENST00000639145 DSPP15924 2871 aaKnown RBP10.76□□□□□ -0.69
SCARB2-215ENST00000639145 CXCL1P09341 107 aa10.76□□□□□ -0.69
SCARB2-215ENST00000639145 HOXD3P31249 432 aaPredicted RBP10.76□□□□□ -0.69
SCARB2-215ENST00000639145 SSBP2P81877 361 aaPredicted RBP10.75□□□□□ -0.69
SCARB2-215ENST00000639145 NCKAP5O14513 1909 aa10.75□□□□□ -0.69
SCARB2-215ENST00000639145 CD28P10747 220 aa10.75□□□□□ -0.69
SCARB2-215ENST00000639145 NUP35Q8NFH5 326 aa10.75□□□□□ -0.69
SCARB2-215ENST00000639145 TMEM170AQ8WVE7 144 aa10.75□□□□□ -0.69
SCARB2-215ENST00000639145 PARD6GQ9BYG4 376 aaPredicted RBP10.75□□□□□ -0.69
SCARB2-215ENST00000639145 A0A0U1RRA0 63 aa10.75□□□□□ -0.69
SCARB2-215ENST00000639145 HOXA5P20719 270 aa10.75□□□□□ -0.69
SCARB2-215ENST00000639145 MALP21145 153 aa10.75□□□□□ -0.69
SCARB2-215ENST00000639145 ZNF491Q8N8L2 437 aa10.75□□□□□ -0.69
SCARB2-215ENST00000639145 MRPL27Q9P0M9 148 aaKnown RBP10.75□□□□□ -0.69
SCARB2-215ENST00000639145 KIAA1549Q9HCM3 1950 aa10.75□□□□□ -0.69
SCARB2-215ENST00000639145 COX6CP09669 75 aa10.74□□□□□ -0.69
SCARB2-215ENST00000639145 BCL6BQ8N143 479 aaPredicted RBP10.74□□□□□ -0.69
SCARB2-215ENST00000639145 PHLDA1Q8WV24 401 aaPredicted RBP10.74□□□□□ -0.69
SCARB2-215ENST00000639145 SPTBN5Q9NRC6 3674 aaKnown RBP10.74□□□□□ -0.69
SCARB2-215ENST00000639145 CCL24O00175 119 aa10.74□□□□□ -0.69
SCARB2-215ENST00000639145 HBDP02042 147 aa10.74□□□□□ -0.69
SCARB2-215ENST00000639145 CRPP02741 224 aa10.74□□□□□ -0.69
SCARB2-215ENST00000639145 FOXL1Q12952 345 aa10.74□□□□□ -0.69
SCARB2-215ENST00000639145 TTC9CQ8N5M4 171 aa10.74□□□□□ -0.69
SCARB2-215ENST00000639145 H3BRM9 83 aa10.74□□□□□ -0.69
SCARB2-215ENST00000639145 C1orf194Q5T5A4 169 aa10.74□□□□□ -0.69
SCARB2-215ENST00000639145 GGTLC3B5MD39 225 aa10.74□□□□□ -0.69
SCARB2-215ENST00000639145 C9JQL5 133 aa10.74□□□□□ -0.69
SCARB2-215ENST00000639145 SMKR1H3BMG3 65 aa10.74□□□□□ -0.69
SCARB2-215ENST00000639145 IGLV1-47P01700 117 aa10.74□□□□□ -0.69
SCARB2-215ENST00000639145 FAM90A2PQ658T7 463 aa10.74□□□□□ -0.69
SCARB2-215ENST00000639145 WFDC11Q8NEX6 87 aa10.74□□□□□ -0.69
SCARB2-215ENST00000639145 GNB1LQ9BYB4 327 aa10.74□□□□□ -0.69
SCARB2-215ENST00000639145 TANC2Q9HCD6 1990 aa10.73□□□□□ -0.69
SCARB2-215ENST00000639145 HIST1H2BKO60814 126 aa10.73□□□□□ -0.69
SCARB2-215ENST00000639145 HIST1H2BJP06899 126 aa10.73□□□□□ -0.69
SCARB2-215ENST00000639145 HIST1H2BOP23527 126 aa10.73□□□□□ -0.69
SCARB2-215ENST00000639145 HIST1H2BBP33778 126 aa10.73□□□□□ -0.69
SCARB2-215ENST00000639145 HIST1H2BDP58876 126 aa10.73□□□□□ -0.69
SCARB2-215ENST00000639145 HIST1H2BCP62807 126 aa10.73□□□□□ -0.69
SCARB2-215ENST00000639145 HIST2H2BEQ16778 126 aa10.73□□□□□ -0.69
SCARB2-215ENST00000639145 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.73□□□□□ -0.69
SCARB2-215ENST00000639145 CFAP161Q6P656 301 aa10.73□□□□□ -0.69
SCARB2-215ENST00000639145 HIST1H2BHQ93079 126 aa10.73□□□□□ -0.69
SCARB2-215ENST00000639145 HIST1H2BNQ99877 126 aa10.73□□□□□ -0.69
SCARB2-215ENST00000639145 HIST1H2BMQ99879 126 aa10.73□□□□□ -0.69
SCARB2-215ENST00000639145 ALKBH7Q9BT30 221 aaPredicted RBP10.73□□□□□ -0.69
SCARB2-215ENST00000639145 HECTD1Q9ULT8 2610 aa10.73□□□□□ -0.69
SCARB2-215ENST00000639145 F6UB75 175 aa10.73□□□□□ -0.69
SCARB2-215ENST00000639145 NIT1Q86X76 327 aa10.73□□□□□ -0.69
SCARB2-215ENST00000639145 AMN1Q8IY45 258 aa10.73□□□□□ -0.69
SCARB2-215ENST00000639145 IGHV7-4-1A0A0J9YVY3 117 aa10.73□□□□□ -0.69
SCARB2-215ENST00000639145 DMRTA1Q5VZB9 504 aa10.73□□□□□ -0.69
SCARB2-215ENST00000639145 DPH3P1Q9H4G8 78 aa10.73□□□□□ -0.69
SCARB2-215ENST00000639145 REV3LO60673 3130 aa10.72□□□□□ -0.69
SCARB2-215ENST00000639145 IGHV3-16A0A0C4DH30 117 aa10.72□□□□□ -0.69
SCARB2-215ENST00000639145 ADARB2-AS1A8MUL3 147 aa10.72□□□□□ -0.69
SCARB2-215ENST00000639145 HLA-DMBP28068 263 aa10.72□□□□□ -0.69
SCARB2-215ENST00000639145 ORMDL2Q53FV1 153 aa10.72□□□□□ -0.69
SCARB2-215ENST00000639145 Q8N9W7 124 aa10.72□□□□□ -0.69
SCARB2-215ENST00000639145 C8orf49Q96NF6 230 aa10.72□□□□□ -0.69
SCARB2-215ENST00000639145 TRBV24-1A0A075B6N3 115 aa10.72□□□□□ -0.69
SCARB2-215ENST00000639145 LMO4P61968 165 aa10.72□□□□□ -0.69
SCARB2-215ENST00000639145 TSSC4Q9Y5U2 329 aaPredicted RBP10.72□□□□□ -0.69
SCARB2-215ENST00000639145 SLURP1P55000 103 aa10.72□□□□□ -0.69
SCARB2-215ENST00000639145 ZNF726P1Q15940 193 aa10.72□□□□□ -0.69
SCARB2-215ENST00000639145 ATP5L2Q7Z4Y8 100 aa10.72□□□□□ -0.69
SCARB2-215ENST00000639145 MRAPQ8TCY5 172 aa10.72□□□□□ -0.69
SCARB2-215ENST00000639145 SLC25A2Q9BXI2 301 aa10.72□□□□□ -0.69
SCARB2-215ENST00000639145 IGHV3-64A0A075B6Q5 118 aa10.72□□□□□ -0.69
SCARB2-215ENST00000639145 UTF1Q5T230 341 aa10.72□□□□□ -0.69
SCARB2-215ENST00000639145 C1orf159Q96HA4 380 aa10.72□□□□□ -0.69
SCARB2-215ENST00000639145 C17orf77Q96MU5 243 aa10.72□□□□□ -0.69
SCARB2-215ENST00000639145 A0A1B0GW64 132 aa10.71□□□□□ -0.69
SCARB2-215ENST00000639145 F5H768 121 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms