RNA–Protein interactions for RNA: ENST00000638952.1

HNRNPU-217, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 5,678 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-217ENST00000638952 LY6DQ14210 128 aa13.83□□□□□ -0.2
HNRNPU-217ENST00000638952 MRPL51Q4U2R6 128 aaKnown RBP13.83□□□□□ -0.2
HNRNPU-217ENST00000638952 Q6ZVH6 145 aa13.83□□□□□ -0.2
HNRNPU-217ENST00000638952 MRPL35Q9NZE8 188 aaKnown RBP13.83□□□□□ -0.2
HNRNPU-217ENST00000638952 THADAQ6YHU6 1953 aa13.83□□□□□ -0.2
HNRNPU-217ENST00000638952 WIPF3A6NGB9 483 aa13.83□□□□□ -0.2
HNRNPU-217ENST00000638952 PROK2Q9HC23 129 aa13.83□□□□□ -0.2
HNRNPU-217ENST00000638952 I3L3M4 83 aa13.82□□□□□ -0.2
HNRNPU-217ENST00000638952 HLA-DRB4P13762 266 aa13.82□□□□□ -0.2
HNRNPU-217ENST00000638952 WDR86Q86TI4 376 aa13.82□□□□□ -0.2
HNRNPU-217ENST00000638952 HLA-DRB4X5D2U9 266 aa13.82□□□□□ -0.2
HNRNPU-217ENST00000638952 MGAMO43451 1857 aa13.82□□□□□ -0.2
HNRNPU-217ENST00000638952 M0R1W7 72 aa13.82□□□□□ -0.2
HNRNPU-217ENST00000638952 SIVA1O15304 175 aa13.82□□□□□ -0.2
HNRNPU-217ENST00000638952 YPEL3P61236 119 aaPredicted RBP13.82□□□□□ -0.2
HNRNPU-217ENST00000638952 VWC2Q2TAL6 325 aa13.82□□□□□ -0.2
HNRNPU-217ENST00000638952 NXPH4O95158 308 aa13.82□□□□□ -0.2
HNRNPU-217ENST00000638952 BRD3OSQ6XYD6 125 aa13.82□□□□□ -0.2
HNRNPU-217ENST00000638952 ZNF503-AS2A6NEH8 195 aa13.82□□□□□ -0.2
HNRNPU-217ENST00000638952 SHISA9B4DS77 424 aa13.82□□□□□ -0.2
HNRNPU-217ENST00000638952 WDR81Q562E7 1941 aa13.82□□□□□ -0.2
HNRNPU-217ENST00000638952 FAM186AA6NE01 2351 aa13.81□□□□□ -0.2
HNRNPU-217ENST00000638952 AHCTF1Q8WYP5 2266 aa13.81□□□□□ -0.2
HNRNPU-217ENST00000638952 CLPSL1A2RUU4 121 aa13.81□□□□□ -0.2
HNRNPU-217ENST00000638952 OOSP1A8MZH6 123 aa13.81□□□□□ -0.2
HNRNPU-217ENST00000638952 J3KT08 172 aa13.81□□□□□ -0.2
HNRNPU-217ENST00000638952 DKK1O94907 266 aa13.81□□□□□ -0.2
HNRNPU-217ENST00000638952 EFNA4P52798 201 aa13.81□□□□□ -0.2
HNRNPU-217ENST00000638952 TRAV26-2A0A0B4J265 109 aa13.81□□□□□ -0.2
HNRNPU-217ENST00000638952 IGLC7A0M8Q6 106 aa13.81□□□□□ -0.2
HNRNPU-217ENST00000638952 TRAV13-2A0A0B4J235 113 aa13.81□□□□□ -0.2
HNRNPU-217ENST00000638952 LMO1P25800 156 aa13.81□□□□□ -0.2
HNRNPU-217ENST00000638952 NKAPP1Q8N9T2 125 aa13.81□□□□□ -0.2
HNRNPU-217ENST00000638952 KNCNA6PVL3 124 aa13.81□□□□□ -0.2
HNRNPU-217ENST00000638952 LY6HO94772 140 aa13.8□□□□□ -0.2
HNRNPU-217ENST00000638952 EGR2P11161 476 aaPredicted RBP13.8□□□□□ -0.2
HNRNPU-217ENST00000638952 PLXNA2O75051 1894 aa13.8□□□□□ -0.2
HNRNPU-217ENST00000638952 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.8□□□□□ -0.2
HNRNPU-217ENST00000638952 ZNF561-AS1K7EIQ3 104 aa13.8□□□□□ -0.2
HNRNPU-217ENST00000638952 POU2AF1Q16633 256 aa13.8□□□□□ -0.2
HNRNPU-217ENST00000638952 SIGLEC8Q9NYZ4 499 aa13.8□□□□□ -0.2
HNRNPU-217ENST00000638952 V9GYV3 84 aa13.8□□□□□ -0.2
HNRNPU-217ENST00000638952 PDE6HQ13956 83 aa13.8□□□□□ -0.2
HNRNPU-217ENST00000638952 SVIPQ8NHG7 77 aa13.8□□□□□ -0.2
HNRNPU-217ENST00000638952 MSRB2Q9Y3D2 182 aa13.8□□□□□ -0.2
HNRNPU-217ENST00000638952 SMIM27A0A1W2PRY6 76 aa13.79□□□□□ -0.2
HNRNPU-217ENST00000638952 DUX4L9Q6RFH8 374 aaPredicted RBP13.79□□□□□ -0.2
HNRNPU-217ENST00000638952 NDUFA4L2Q9NRX3 87 aa13.79□□□□□ -0.2
HNRNPU-217ENST00000638952 NPYP01303 97 aa13.79□□□□□ -0.2
HNRNPU-217ENST00000638952 Q6ZR03 302 aa13.79□□□□□ -0.2
HNRNPU-217ENST00000638952 RHPN1-AS1Q9BWJ2 59 aa13.79□□□□□ -0.2
HNRNPU-217ENST00000638952 RSPO1Q2MKA7 263 aaPredicted RBP13.79□□□□□ -0.2
HNRNPU-217ENST00000638952 PRB2P02812 416 aaPredicted RBP13.78□□□□□ -0.2
HNRNPU-217ENST00000638952 MED12Q93074 2177 aa13.78□□□□□ -0.2
HNRNPU-217ENST00000638952 H3BUX3 64 aa13.78□□□□□ -0.2
HNRNPU-217ENST00000638952 SH2D6Q7Z4S9 175 aa13.78□□□□□ -0.2
HNRNPU-217ENST00000638952 TEX48A0A1B0GUV7 120 aa13.77□□□□□ -0.2
HNRNPU-217ENST00000638952 J3QQQ9 107 aa13.77□□□□□ -0.2
HNRNPU-217ENST00000638952 ASPHD1Q5U4P2 390 aa13.77□□□□□ -0.2
HNRNPU-217ENST00000638952 SDHAF1A6NFY7 115 aa13.77□□□□□ -0.2
HNRNPU-217ENST00000638952 NDUFS5O43920 106 aa13.77□□□□□ -0.2
HNRNPU-217ENST00000638952 DEFB130BP0DP73 79 aa13.77□□□□□ -0.2
HNRNPU-217ENST00000638952 DEFB130AP0DP74 79 aa13.77□□□□□ -0.2
HNRNPU-217ENST00000638952 C17orf58Q2M2W7 97 aa13.77□□□□□ -0.2
HNRNPU-217ENST00000638952 F8VRH5 84 aa13.77□□□□□ -0.21
HNRNPU-217ENST00000638952 IGHG2P01859 326 aa13.77□□□□□ -0.21
HNRNPU-217ENST00000638952 ZNF833PQ6ZTB9 187 aa13.77□□□□□ -0.21
HNRNPU-217ENST00000638952 E7EQL1 145 aa13.77□□□□□ -0.21
HNRNPU-217ENST00000638952 DKK2Q9UBU2 259 aa13.77□□□□□ -0.21
HNRNPU-217ENST00000638952 BAALC-AS2P0C853 105 aa13.76□□□□□ -0.21
HNRNPU-217ENST00000638952 CFC1BP0CG36 223 aa13.76□□□□□ -0.21
HNRNPU-217ENST00000638952 CFC1P0CG37 223 aa13.76□□□□□ -0.21
HNRNPU-217ENST00000638952 KLF5Q13887 457 aaPredicted RBP13.76□□□□□ -0.21
HNRNPU-217ENST00000638952 TRBV25-1A0A075B6N4 114 aa13.76□□□□□ -0.21
HNRNPU-217ENST00000638952 IGHV3-16A0A0C4DH30 117 aa13.76□□□□□ -0.21
HNRNPU-217ENST00000638952 ACYP1P07311 99 aa13.76□□□□□ -0.21
HNRNPU-217ENST00000638952 LY6G6EA0A0G2JKS1 128 aa13.76□□□□□ -0.21
HNRNPU-217ENST00000638952 FAM223BA6NKX1 122 aa13.76□□□□□ -0.21
HNRNPU-217ENST00000638952 FAM223AQ8IWN6 122 aa13.76□□□□□ -0.21
HNRNPU-217ENST00000638952 U3KQA8 63 aa13.76□□□□□ -0.21
HNRNPU-217ENST00000638952 LRRK1Q38SD2 2015 aa13.76□□□□□ -0.21
HNRNPU-217ENST00000638952 PHF3Q92576 2039 aaKnown RBP13.76□□□□□ -0.21
HNRNPU-217ENST00000638952 WFDC9Q8NEX5 89 aa13.75□□□□□ -0.21
HNRNPU-217ENST00000638952 RHODO00212 210 aa13.75□□□□□ -0.21
HNRNPU-217ENST00000638952 CDPF1Q6NVV7 123 aa13.75□□□□□ -0.21
HNRNPU-217ENST00000638952 ESPL1Q14674 2120 aa13.75□□□□□ -0.21
HNRNPU-217ENST00000638952 CRYGCP07315 174 aa13.75□□□□□ -0.21
HNRNPU-217ENST00000638952 NDUFS7O75251 213 aa13.74□□□□□ -0.21
HNRNPU-217ENST00000638952 DEFB125Q8N687 156 aa13.74□□□□□ -0.21
HNRNPU-217ENST00000638952 IGHV2-70DA0A0C4DH43 119 aa13.74□□□□□ -0.21
HNRNPU-217ENST00000638952 MRPL23Q16540 153 aaKnown RBP13.74□□□□□ -0.21
HNRNPU-217ENST00000638952 Q6ZS92 163 aa13.74□□□□□ -0.21
HNRNPU-217ENST00000638952 FAM231DQ6ZW35 169 aa13.74□□□□□ -0.21
HNRNPU-217ENST00000638952 USMG5Q96IX5 58 aa13.74□□□□□ -0.21
HNRNPU-217ENST00000638952 A0A1B0GX51 115 aa13.73□□□□□ -0.21
HNRNPU-217ENST00000638952 PIP4P2Q8N4L2 257 aa13.73□□□□□ -0.21
HNRNPU-217ENST00000638952 IGLV3-1P01715 115 aa13.73□□□□□ -0.21
HNRNPU-217ENST00000638952 TICRRQ7Z2Z1 1910 aa13.73□□□□□ -0.21
HNRNPU-217ENST00000638952 TRBV19A0A075B6N1 114 aa13.73□□□□□ -0.21
HNRNPU-217ENST00000638952 F6UB75 175 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms